LOCUS BC113004 2669 bp mRNA linear HUM 04-OCT-2006
DEFINITION Homo sapiens GC-rich promoter binding protein 1, mRNA (cDNA clone
MGC:126339 IMAGE:40034860), complete cds.
ACCESSION BC113004
VERSION BC113004.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2669)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2669)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-FEB-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 4, 2006 this sequence version replaced BC113004.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 14 Row: l Column: 1.
FEATURES Location/Qualifiers
source 1..2669
/db_xref="H-InvDB:HIT000340522"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:126339 IMAGE:40034860"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_282"
/note="Vector: pCR-Blunt II-TOPO; Clone identification
sequence tag: ATTATATA sequenced from the reverse primer"
gene 1..2669
/gene="GPBP1"
/gene_synonym="DKFZp761C169"
/gene_synonym="GPBP"
/db_xref="GeneID:65056"
/db_xref="HGNC:HGNC:29520"
/db_xref="MIM:608412"
CDS 1024..2445
/gene="GPBP1"
/gene_synonym="DKFZp761C169"
/gene_synonym="GPBP"
/codon_start=1
/product="GC-rich promoter binding protein 1"
/protein_id="AAI13005.1"
/db_xref="GeneID:65056"
/db_xref="HGNC:HGNC:29520"
/db_xref="MIM:608412"
/translation="MAQHDFAPAWLNFPTPPSSTKSSLNFEKHSENFAWTENRYDVNR
RRHNSSDGFDSAIGRPNGGNFGRKEKNGWRTHGRNGTENINHRGGYHGGSSRSRSSIF
HAGKSQGLHENNIPDNETGRKEDKRERKQFEAEDFPSLNPEYEREPNHNKSLAAGVWE
YPPNPKSRAPRMLVIKKGNTKDLQLSGFPVVGNLPSQPVKNGTGPSVYKGLVPKPAAP
PTKPTQWKSQTKENKVGTSFPHESTFGVGNFNAFKSTAKNFSPSTNSVKECNRSNSSS
PVDKLNQQPRLTKLTRMRTDKKSEFLKALKRDRVEEEHEDESRAGSEKDDDSFNLHNS
NSTHQERDINRNFDENEIPQENGNASVISQQIIRSSTFPQTDVLSSSLEAEHRLLKEM
GWQEDSENDETCAPLTEDEMREFQVISEQLQKNGLRKNGILKNGLICDFKFGPWKNST
FKPTTENDDTETSSSDTSDDDDV"
BASE COUNT 867 a 451 c 582 g 769 t
ORIGIN
1 ggtggggcag aaggtgattg aattactcag atatgaagat catcatctag gttttgtgta
61 aaaggccctg gatattttaa gtggccattt tggatttaca gtgtttttgg ataattttgc
121 cccagaagtt tattaaaatt ggcaagaatc gtctgtgaag tgaattgata gtagtgaaca
181 attcagcaag ctacttaaaa agagacccag gcagcatttc ttcagtattt tggttcaaac
241 ggattatata actggttaca gtatttcagc tggtggtaat ttttgcctcc ccttccccca
301 ccccgttgtt ggggttcttc agccgaaact gagagacgtt gatttgtgta ctgagtagtt
361 tcagcagttt caaatgactg agtattgctg aagtttcatg gcagtttatt tttaccttta
421 ttgaaagttt taggaatttt tgacttcagc tctttcatgt cacaatggga cactttttct
481 gaatgaagag attgaaagaa tacagagttt ttttcctttt atcttttatt tacgtggaaa
541 tttaagatgt tgcagttttc cggcagcatg gtagtattga gatagctatg tgtgtctctg
601 tatatgctga tgtttaggaa tgctcttcag atgtgaaatt ttctttttgt ttttgctttt
661 tggctcgtaa attggatatt tcatctggag tggacaagta caacagtggc aagtacatgg
721 aataataaag aagactttga tcttaaatct aaagaacttg gctaattcgg gagatagcca
781 tatgaaaact ttaaaacaga agtatgggta gctgacttga agtaactcta tgtcaaatag
841 tcgtaggtta agtatcttca aagaacttcg atattatttc agaggataca aaataaaaat
901 acaaactgga aaataaagat tacagagaaa aaaccaacac cttcctgtgc agtcctgttg
961 gaatttggac ttgccatgag gtgttgaagc cttgtttcac tgagttggag agactggacc
1021 taaatggcgc agcatgactt tgctccagcc tggcttaatt tccctactcc accatcatca
1081 acaaagtcgt cattgaattt tgagaagcat tctgaaaact ttgcatggac agagaatcgt
1141 tatgatgtga accgtcgacg acacaactct tcagatggct ttgattctgc tattggacgt
1201 cctaatggag gtaactttgg aaggaaagaa aaaaatggat ggcgtacaca tggaagaaat
1261 ggtacagaaa acataaatca tcgaggtgga taccatggtg gaagttcccg ttctcgtagc
1321 agtattttcc atgcaggaaa aagccaagga ctacatgaaa acaacatacc tgacaatgaa
1381 accgggagga aagaagacaa gagagaacgc aaacagtttg aagctgagga ttttccgtct
1441 ttaaatcctg agtatgagag agaaccaaat cacaataagt ctttagctgc aggtgtgtgg
1501 gaatatcctc cgaatcctaa atctagagct ccaaggatgc tggtcattaa gaaaggtaat
1561 acaaaagact tacagctatc tggattccca gtagtaggaa atcttccgtc acagccagtt
1621 aagaatggaa ctggtccaag tgtttataaa ggtttagtcc ctaaacctgc tgctccacct
1681 acaaaaccta cacaatggaa aagccaaaca aaagaaaata aagttggaac ttctttccct
1741 catgagtcca catttggcgt tggcaacttt aatgctttta aatcaactgc caagaacttt
1801 agtccatcta caaattcagt gaaagagtgt aatcgctcaa attcctcttc tcctgttgac
1861 aaacttaatc agcagcctcg tctaaccaaa ctgacacgaa tgcgcactga taagaagagt
1921 gaatttttga aagcattgaa aagagacaga gtagaagagg aacatgaaga tgaaagccgt
1981 gctggctcag agaaggatga cgactcattt aatttacata acagcaatag tactcaccaa
2041 gaaagggata taaaccgaaa cttcgatgaa aatgaaattc ctcaagagaa tggcaatgcc
2101 tcagtgattt cccagcagat cattcggtct tcaaccttcc cacaaactga tgttctttca
2161 agttcacttg aggcagaaca cagattgtta aaggaaatgg gctggcagga agacagtgaa
2221 aatgatgaaa catgtgctcc cttaactgag gatgaaatga gagaattcca agttattagt
2281 gaacagttac agaagaatgg tctgagaaaa aatggtattt tgaaaaatgg cttgatctgt
2341 gacttcaagt ttggaccgtg gaagaacagc actttcaaac ccacaactga gaatgatgac
2401 acagagacaa gtagcagtga tacatcagat gacgacgatg tgtgaaggat ttcctaacag
2461 ctttagaaat cttagtgtga tacatctctc atacagtttg gggtgaattg taaaaatgaa
2521 gaactataat ttatgtagtg aaatacccca ttagaagagg attttttggg ggacttcaat
2581 atgaagaaaa ccaagaatgt tttgttgggc tgtgttgaac attatttctt tgtaaatgaa
2641 tgttgtagga atgaggactt gggttggtc
//