LOCUS BC112942 5547 bp mRNA linear HTC 19-OCT-2006
DEFINITION Homo sapiens cDNA clone IMAGE:6500507, containing frame-shift
errors.
ACCESSION BC112942
VERSION BC112942.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5547)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 5547)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-FEB-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 255 Row: p Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24497617
This clone has the following problem: frame shifted.
FEATURES Location/Qualifiers
source 1..5547
/db_xref="H-InvDB:HIT000340515"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6500507"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 1820 a 985 c 1164 g 1578 t
ORIGIN
1 gccagagctg cgagcgcctg gagctggatc tctctccggt cgcgcacgcc gaggccagta
61 gggagagaag atggtggttc tccgcagcag cttggagctg cacaaccact ccgcggcctc
121 ggccacgggc tccttggacc tgtccagtga cttcctcagt ctggagcaca tcggccggag
181 gcggctccgc tcggccggcg cggcgcagaa gaaacccgcg gcgaccacag ccaaagcggg
241 cgatgggtca tcagttaagg aagttgaaac ctaccaccgg acacgtgctt taagatcttt
301 gagaaaagat gcacagaatt cttcagattc tagttttgag aagaatgtgg aaataacgga
361 gcaacttgct aatggcaggc attttacaag gcagttggcc agacagcagg ctgataaaaa
421 aaaagaagag cacagagaag acaaagtgat tccagttact cggtcattga gggctagaaa
481 catcgttcaa agtacagaac acttacatga agataatggt gatgttgaag tgcgtcgaag
541 ttgtaggatt agaagtcgtt atagtggtgt aaaccagtcc atgctgtttg acaaacttat
601 aactaacact gctgaagctg tacttcaaaa aatggatgac atgaagaaga tgcgtagaca
661 gcgaatgaga gaacttgaag acttgggagt gtttaatgaa acagaagaaa gcaatcttaa
721 tatgtacaca agaggaaaac agaaagatat tcaaagaact gatgaagaaa caactgataa
781 tcaagaaggc agtgtggagt catctgaaga gggtgaagac caagaacatg aagatgatgg
841 tgaagatgaa gatgatgaag atgatgatga tgatgacgat gatgatgatg atgatgatga
901 tgaagatgat gaagatgaag aagatggaga agaagagaat cagaagcgat attatcttag
961 acagagaaaa gctactgttt actatcaggc tccattggaa aaacctcgtc accagagaaa
1021 gcccaacata ttttatagtg gcccagcttc tcctgcaaga ccaagatacc gattatcttc
1081 cgcaggacca agaagtcctt actgtaaacg aatgaacagg cgaaggcatg caatccacag
1141 tagtgactcg acttcatctt cctcctctga agatgaacag cactttgaga ggcggaggaa
1201 aaggagtcgt aatagggcta tcaataggtg cctcccacta aattttcgga aagatgaatt
1261 aaaaggcatt tataaagatc gaatgaaaat tggagcaagc cttgccgatg ttgatccaat
1321 gcaactagat tcttcagtac gatttgatag tgttggtggc ctgtctaatc atatagcagc
1381 tctaaaagag atggtggtgt ttccattact ttatccagaa gtctttgaaa aatttaaaat
1441 tcaaccccca agaggttgtt tgttttatgg gccacctgga actggaaaga ctctggttgc
1501 cagagcactt gccaatgagt gcagtcaagg ggataaaaga gtagcatttt tcatgaggaa
1561 aggtgctgat tgtctaagta aatgggtagg agaatctgaa agacagctac gattgctgtt
1621 tgatcaggcc tatcagatgc gcccatcaat tatttttttt gacgaaattg atggtctggc
1681 tccagtacgg tcaagcaggc aagatcagat tcacagttct attgtttcca ccctgctagc
1741 tcttatggat ggattggaca gcagagggga aattgtggtc attggtgcta cgaacaggct
1801 agattctata gatcctgctt tacgaaggcc tggtcgcttt gatagagaat tcctctttag
1861 cctgcctgat aaagaggctc gaaaagagat tctaaagatt cacaccaggg attggaatcc
1921 caaaccactg gacacatttt tagaagagct agcagaaaac tgtgttggat actgtggagc
1981 agatattaaa tcaatatgtg ctgaagctgc tttatgtgct ttacgacgac gctacccaca
2041 gatctatacc actagtgaga aactgcagtt ggatctctct tcaattaata tctcagctaa
2101 ggatttcgag gtagctatgc aaaagatgat accagcctcc caaagagctg tgacatcacc
2161 tgggcaggca ctgtccaccg ttgtgaaacc actcctgcaa aacactgttg acaagatttt
2221 agaagccctg cagagagtat ttccacatgc agaattcaga acaaataaaa cattagactc
2281 agatatttct tgtcctctgc tagaaagtga cttggcttac agtgatgatg atgttccatc
2341 agtttatgaa aatggacttt ctcagaaatc ttctcataag gcaaaagaca attttaattt
2401 tcttcatttg aatagaaatg cttgttacca acctatgtct tttcgaccaa gaatattgat
2461 agtaggagaa ccaggatttg ggcaaggttc tcacttggca ccagctgtca ttcatgcttt
2521 ggaaaagttt actgtatata cattagacat tcctgttctt tttggagtta gtactacatc
2581 ccctgaagaa acatgtgccc aggtgattcg tgaagctaag agaacagcac caagtatagt
2641 gtatgttcct catatccacg tgtggtggga aatagttgga ccgacactta aagccacatt
2701 taccacatta ttacagaata ttccttcatt tgctccagtt ttactacttg caacttctga
2761 caaaccccat tccgctttgc cagaagaggt gcaagaattg tttatccgtg attatggaga
2821 gatttttaat gtccagttac cggataaaga agaacggaca aaattttttg aagatttaat
2881 tctaaaacaa gctgctaagc ctcctatatc aaaaaagaaa gcagttttgc aggctttgga
2941 ggtactccca gtagcaccac cacctgagcc aagatcactg acagcagaag aagtgaaacg
3001 actagaagaa caagaagaag atacatttag agaactgagg attttcttaa gaaatgttac
3061 acataggctt gctattgaca agcgattccg agtgtttact aagcctgttg accctgatga
3121 ggttcctgat tatgtcactg taataaagca accaatggac ctttcatctg taatcagtaa
3181 aattgatcta cacaagtatc tgactgtgaa agactatttg agagatattg atctaatctg
3241 tagtaatgcc ttagaataca atccagatag agatcctgga gatcgtctta ttaggcatag
3301 agcctgtgct ttaagagata ctgcctatgc cataattaaa gaagaacttg atgaagactt
3361 tgagcagctc tgtgaagaaa ttcaggaatc tagaaagaaa agaggttgta gctcctccaa
3421 atatgccccg tcttactacc atgtgatgcc aaagcaaaat tccactcttg ttggtgataa
3481 aagatcagac ccagagcaga atgaaaagct aaagacaccg agtactcctg tggcttgcag
3541 cactcctgct cagttgaaga ggaaaattcg caaaaagtca aactggtact taggcaccat
3601 aaaaaagcga aggaagattt cacaggcaaa ggatgatagc cagaatgcca tagatcacaa
3661 aattgagagt gatacagagg aaactcaaga cacaagtgta gatcataatg agaccggaaa
3721 cacaggagag tcttcggtgg aagaaaatga aaaacagcaa aatgcctctg aaagcaaact
3781 ggaattgaga aataattcaa atacttgtaa tatagagaat gagcttgaag actctaggaa
3841 gactacagca tgtacagaat tgagagacaa gattgcttgt aatggagatg cttctagctc
3901 tcagataata catatttctg atgaaaatga aggaaaagaa atgtgtgttc tgcgaatgac
3961 tcgagctaga cgttcccagg tagaacagca gcagctcatc actgttgaaa aggctttggc
4021 aattctttct cagcctacac cctcacttgt tgtggatcat gagcgattaa aaaatctttt
4081 gaagactgtt gttaaaaaaa agtcaaaact acaacatatt tcagttggaa aatttgtatg
4141 cagtaatcag ccaatgtatt tatcggcatc gcaaggacca tgataaaaca tcacttattc
4201 agaaaatgga gcaagaggta gaaaacttca gttgttccag atgatgatgt catggtatcg
4261 agtattcttt atattcagtt cctatttaag tcatttttgt catgtccgcc taattgatgt
4321 agtatgaaac cctgcatctt taaggaaaag attaaaatag taaaataaaa gtatttaaac
4381 tttcctgata tttatgtaca tattaagata aatgtcattt gtaagataac tgataaatat
4441 tggaactttg ctagaacaag accctgtagt aatagtaata atagttgaag tttggccaac
4501 tcttaataaa gttattttgg taactaatgt tttatggcac ttaagaataa ttagcagcgt
4561 taaattttgt ttgtattaag cacttttaat tttatccttc ctaaaaatag tttattgtat
4621 ctgacaagaa acttacttaa ccattgtgtc cttcccatct tttttgtcat ctttgttttc
4681 ttcaaatgcc ctcctcccat ctgccttgag attcccttgt cttcacttaa aagccagagt
4741 gcaagtcatg atttgcggga gggctcttga accacttctg gctgcaccac aattctgtac
4801 ttgagtatca cagtcattgt ttttgagaca aacattttta taattctaat ttgggttaat
4861 aaagatttta aatatttctt ggtttacttt tgtaattata tacacaacaa atgtattaat
4921 aactaccttg ttaaacacct tttaatagca caaggttttt atatttgcaa gctgttgata
4981 tctttctaaa actgtttagg ttatagtcta ttgatacttt ttatatacaa ttttataaat
5041 ataaatatta taattttata ttaatggtac caaaaataca tttcttaagg ttaaaagcat
5101 gcacttccat gcatacttgc ttttggggag agtggggaga agacattcta ataatcagtt
5161 tgtgaaatag cttctgttgg aaaccttttg aggggaataa ggaatggtca tctaaaatga
5221 gagattctgg attttaatgc agttcaaagt tgagctgtat ttttgttgtt gatttatctg
5281 gatttttttt aaagccttct aaaacccagt gaattcaata ccttaattag tacatactat
5341 cttatgtaat gcataaagca atgccagtca ctgagaacat ttaaatatat ttatattcct
5401 ggagatacac attctcattt ttgttggttt attataaatt attcttctag atgcatcttt
5461 tataactagg atttcatttt gtgtgtatag cttatgtaat aaattttaaa ggtgaaaact
5521 ctcttaaaaa aaaaaaaaaa aaaaaaa
//