LOCUS BC112940 4974 bp mRNA linear HUM 06-JUN-2006
DEFINITION Homo sapiens cytoplasmic linker associated protein 1, mRNA (cDNA
clone MGC:131895 IMAGE:5501463), complete cds.
ACCESSION BC112940
VERSION BC112940.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4974)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4974)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-FEB-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 255 Row: f Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31563536.
FEATURES Location/Qualifiers
source 1..4974
/db_xref="H-InvDB:HIT000340513"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:131895 IMAGE:5501463"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..4974
/gene="CLASP1"
/gene_synonym="KIAA0622"
/gene_synonym="MAST1"
/db_xref="GeneID:23332"
/db_xref="HGNC:HGNC:17088"
/db_xref="MIM:605852"
CDS 335..4750
/gene="CLASP1"
/gene_synonym="KIAA0622"
/gene_synonym="MAST1"
/codon_start=1
/product="CLASP1 protein"
/protein_id="AAI12941.1"
/db_xref="GeneID:23332"
/db_xref="HGNC:HGNC:17088"
/db_xref="MIM:605852"
/translation="MEPRMESCLAQVLQKDVGKRLQVGQELIDYFSDKQKSADLEHDQ
TMLDKLVDGLATSWVNSSNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLIDRLGD
AKDSVREQDQTLLLKIMDQAANPQYVWDRMLGGFKHKNFRTREGICLCLIATLNASGA
QTLTLSKIVPHICNLLGDPNSQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNV
IFTKFDEVQKSGNMIQSANDKNFDDEDSVDGNRPSSASSTSSKAPPSSRRNVGMGTTR
RLGSSTLGSKSSAAKEGAGAVDEEDFIKAFDDVPVVQIYSSRDLEESINKIREILSDD
KHDWEQRVNALKKIRSLLLAGAAEYDNFFQHLRLLDGAFKLSAKDLRSQVVREACITL
GHLSSVLGNKFDHGAEAIMPTIFNLIPNSAKIMATSGVVAVRLIIRHTHIPRLIPVIT
SNCTSKSVAVRRRCFEFLDLLLQEWQTHSLERHISVLAETIKKGIHDADSEARIEARK
CYWGFHSHFSREAEHLYHTLESSYQKALQSHLKNSDSIVSLPQSDRSSSSSQESLNRP
LSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAASAKSKVSSSSGTTPFS
SAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRAKVVSQSQRSRSANPAGA
GSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKIPRSQGCSRETSPNRIGLDRF
GLGQPGRIPGSVNAMRVLSTSTDLEAAVADALLLGDSRSKKKPVRRRYEPYGMYSDDD
ANSDASSVCSERSYGSRNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLK
SQRTLSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFIIIHKDDLQDWLFVLLTQ
LLKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQTQTPNLKVKVAILK
YIESLARQMDPTDFVNSSETRLAVSRIITWTTEPKSSDVRKAAQIVLISLFELNTPEF
TMLLGALPKTFQDGATKLLHNHLKNSSNTSVGSPSNTIGRTPSRHTSSRTSPLTSPTN
CSHGGLSPSMLDYDTENLNSEEIYSSLRGVTEAIEKFSFRSQEDLNEPIKRDGKKECD
IVSRDGGAASPATEGRGGSEVEGGRTALDNKTSLLNTQPPRAFPGPRARDYNPYPYSD
AINTYDKTALKEAVFDDDMEQLRDVPIDHSDLVADLLKELSNHNERVEERKGALLELL
KITREDSLGVWEEHFKTILLLLLETLGDKDHSIRALALRVLREILRNQPARFKNYAEL
TIMKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCIKVLCPIIQTADYPINLAAIKM
QTKVVERIAKESLLQLLVDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEDLKPHL
AQLTGSKMKLLNLYIKRAQTTNSNSSSSSDVSTHS"
BASE COUNT 1394 a 1192 c 1194 g 1194 t
ORIGIN
1 ggcggcggct ctctggtccg cagcggcaac agtaacgaaa aacagggcta atggactgct
61 gaattatgaa gtatttcaga cccagtagta gaacatcact ctgccactca ctcctttatc
121 tcctactagt tatttaaatt ggacttttaa tatcctacca gctgctcttc agacacacat
181 ggtgcattgt tgccattccc cagattgcat ctttgaaaca caggctctta gtaaccttca
241 gcgaacaaag aggcaacctc ccagatacgt ctgctgggag ggagtcatcg tgactgccct
301 ctagcttttg ctggatctgg atttgaattc cactatggag cctcgcatgg agtcctgcct
361 ggcgcaggtg ttgcagaagg atgtggggaa acgattgcag gttggccaag aactgataga
421 ctatttctca gacaaacaga agtctgctga ccttgagcat gaccagacca tgttagataa
481 acttgtggat ggacttgcta cctcttgggt gaactctagc aattacaagg tggttctgct
541 gggcatggac atcctgtccg ccctggtgac ccggctgcag gatcggttca aggcgcagat
601 cggcacagtg ctgccaagtc taatagacag actaggagat gctaaagact ctgtgaggga
661 gcaggaccaa actctgctgc taaagatcat ggatcaagct gctaatcccc agtacgtatg
721 ggacagaatg cttggaggct tcaaacacaa gaatttccgt actcgagaag gcatctgtct
781 ctgccttata gcaacactca atgcctctgg agcacagact ttaacactaa gcaagattgt
841 gccacatata tgcaacttac ttggagatcc aaacagccag gttcgagatg cagcaataaa
901 cagcttagtg gaaatttaca gacatgtagg agaacgtgtg agggcagatc tcagtaaaaa
961 aggattgcca cagtcccggt tgaatgtaat ttttacaaaa tttgatgaag tccagaaatc
1021 tggaaacatg atacaatctg caaatgataa aaatttcgac gatgaagatt ctgtggatgg
1081 taacagacct tcctctgcta gttctacatc atccaaggct ccaccaagtt ctcggagaaa
1141 cgttggaatg ggaaccaccc gccggcttgg ttcatccacc cttggatcca agtcttcagc
1201 tgcaaaagaa ggagctggtg ctgttgatga agaggatttt attaaagcat ttgatgatgt
1261 acctgtagta cagatttatt ccagccgaga ccttgaggaa tccataaaca aaattaggga
1321 aatattatct gatgacaagc atgattggga gcagagagta aatgctctaa aaaagattag
1381 atctttactt ttggctggtg ctgctgagta tgataacttc tttcaacatt tgcgtctttt
1441 ggatggagcc tttaaactct ctgctaagga cctgcggtct caggtagtgc gggaggcttg
1501 tatcacgttg gggcatctgt catcagttct ggggaataag tttgaccatg gagctgaagc
1561 cattatgcca actatcttta atttaattcc aaacagtgcc aaaattatgg ccacatctgg
1621 tgttgtagct gttaggttaa ttattcggca cacacacatc cctaggttaa tacctgtcat
1681 aacaagcaac tgtacctcta agtctgtcgc agttagaagg cgctgttttg aatttttaga
1741 tttgctttta caagaatggc agacacattc actagaacga cacatatcag tattagctga
1801 aacaataaag aagggaatac atgatgctga ttccgaagca agaatagaag ccagaaaatg
1861 ttactggggt ttccacagtc acttcagcag agaagcagag cacttgtacc acaccttgga
1921 gtcctcctac cagaaagccc tgcagtccca cctgaagaac tcagacagca tagtgtctct
1981 gcctcagtca gaccgctcat cttccagctc tcaagagagt ctaaatcgtc cgctgtctgc
2041 caaaagaagt cctactggaa gtaccacatc tagagcttct acagttagta ccaaatctgt
2101 gtcaacgact gggtccctcc agcgatctcg aagtgatatt gatgtgaacg cagcagccag
2161 tgccaaatcc aaagtctcct catcttcggg cacgacgcct ttcagctctg cagcagcttt
2221 gcctccaggg tcatacgcat ccttaggtcg gatccgcaca agacggcaaa gctctgggag
2281 tgccaccaac gtcgcctcta cacctgataa ccggggccgc agtcgcgcta aagtggtttc
2341 acagtcccag cgatccagat ctgctaatcc tgctggtgct ggcagccggt caagttcccc
2401 aggaaaattg ttgggaagtg gttatggtgg acttactggg ggctcctcac gaggcccacc
2461 tgtgacaccg tcttcagaaa agcgaagcaa gattcccagg agccagggat gtagccggga
2521 aacaagtcca aaccgaatag gattagatcg gtttgggctt ggccagccag gaagaatacc
2581 tggttctgtg aatgccatga gagttctgag cacaagtaca gatcttgaag ctgctgttgc
2641 tgatgctttg ctgttaggag actccaggag caagaagaag cctgtgagga ggagatatga
2701 gccgtatggg atgtattctg acgatgatgc caacagtgat gcctcaagtg tttgctctga
2761 gcgctcatat ggctccagga atggtggcat tccccattat ctgcggcaga ctgaggatgt
2821 agcagaagtt ctcaaccact gtgctagttc aaactggtca gaaaggaaag aagggcttct
2881 gggcctgcag aacttactga agagccaaag aacactgagt cgagttgaac tgaaaaggtt
2941 gtgtgagatc ttcactcgga tgtttgctga ccctcatagc aagagagttt tcagtatgtt
3001 tttggagact cttgtggatt ttataataat tcataaggat gatttacaag actggctttt
3061 tgttcttctc acacaattac ttaagaaaat gggagcagat ttacttggat ctgtgcaagc
3121 aaaagttcaa aaggctctag atgtcacaag ggactccttt ccatttgatc aacaatttaa
3181 cattttgatg agatttattg tggatcaaac tcaaactcca aacctcaagg tcaaagttgc
3241 aatcctgaaa tacattgagt ctctggccag acagatggat ccaacagatt ttgtaaactc
3301 tagtgagaca aggcttgctg tttctagaat cataacctgg acaacagaac caaagagttc
3361 agacgtgaga aaggcagcac agattgtgct aatctctctg tttgaattga atactcctga
3421 atttaccatg ttacttggtg ccttgccaaa aacattccag gatggtgcca ccaaactcct
3481 gcacaaccac ctcaagaatt ccagtaacac cagtgtgggc tctccaagca atacgattgg
3541 ccggacgccc tcccgacaca ccagcagcag gaccagcccc ctgacctcac ccaccaactg
3601 ttcccatggg ggtctgtctc caagcatgct ggactatgat acagagaacc tgaactctga
3661 agaaatctat agttctctac gtggagttac agaagccatt gaaaagttta gttttcgaag
3721 ccaagaagat ctgaatgagc caattaaacg agatggcaaa aaggagtgtg atattgtgtc
3781 ccgcgatggg ggcgctgcct cccctgccac tgagggccgg gggggtagtg aagtagaagg
3841 aggccggaca gctctggata acaagacctc actactcaac acccagcctc cgcgcgcctt
3901 cccggggccg cgggcgcgag actacaaccc gtacccctac tcagatgcca tcaacaccta
3961 cgacaagacc gccctgaaag aggctgtgtt cgatgacgac atggagcagc ttcgagacgt
4021 gcccatcgac cattctgacc tggtggctga ccttctgaaa gagctgtcca accacaatga
4081 gcgagtggag gaacggaagg gagccctgct ggagctgctc aagatcacgc gggaagacag
4141 ccttggtgtc tgggaggagc acttcaagac cattctgctc ctgctgctgg agacccttgg
4201 agacaaagac cattcaattc gagcactggc gttaagagtt ttgagggaaa ttctgagaaa
4261 tcaaccagca agatttaaaa actacgccga gctgacgatt atgaagactc tggaagccca
4321 caaagactcc cataaggagg tggtgagagc ggctgaggag gctgcgtcca cactggccag
4381 ttccatccac ccggagcagt gcatcaaggt gctctgcccc atcatccaga cggccgacta
4441 ccccatcaac cttgctgcca tcaagatgca gaccaaagtc gtcgagagga tcgcaaagga
4501 gtcattgctg cagctccttg tcgacatcat cccaggcttg ctgcagggtt atgacaacac
4561 cgaaagtagt gtgcgtaagg ccagcgtgtt ttgcttagtg gcaatttatt ccgtaatcgg
4621 agaagacctg aaacctcacc ttgcacagct cacagggagc aagatgaagc tactaaactt
4681 atacataaag agggcccaga ccaccaacag caacagcagc tcctcctccg atgtctccac
4741 gcacagctaa tggcagtacc tgtctcttgt gtagacctag aagcaatcgg tggtgcctct
4801 cagagacctt tccccacccc cttcatcggc tgcccagtca gtacaaggag gcccacaaat
4861 atttattaca atcagtattt tggtcccttc cagcttttct gtagaatctt actggtattg
4921 aatgtaaagg aagcaaggcc tgtattgcag tcttcataca aaaaaaaaaa aaaa
//