LOCUS BC112926 5508 bp mRNA linear HUM 06-JUN-2006 DEFINITION Homo sapiens Rho guanine nucleotide exchange factor (GEF) 10, mRNA (cDNA clone MGC:131664 IMAGE:6500770), complete cds. ACCESSION BC112926 VERSION BC112926.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 5508) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 5508) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-FEB-2006) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 255 Row: p Column: 20 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 62548863. FEATURES Location/Qualifiers source 1..5508 /db_xref="H-InvDB:HIT000340504" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:131664 IMAGE:6500770" /tissue_type="Uterus, leiomyosarcoma" /clone_lib="NIH_MGC_71" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..5508 /gene="ARHGEF10" /gene_synonym="GEF10" /db_xref="GeneID:9639" /db_xref="HGNC:HGNC:14103" /db_xref="MIM:608136" CDS 174..4094 /gene="ARHGEF10" /gene_synonym="GEF10" /codon_start=1 /product="ARHGEF10 protein" /protein_id="AAI12927.1" /db_xref="GeneID:9639" /db_xref="HGNC:HGNC:14103" /db_xref="MIM:608136" /translation="MDQREPLPPAPAENEMKYDTNNNEEEEGEQFDFDSGDEIPEADR QAPSAPETGGAGASEAPAPTGGEDGAGAETTPVAEPTKLVLPMKVNPYSVIDITPFQE DQPPTPVPSAEEENVGLHVPCGYLVPVPCGYAVPSNLPLLLPAYSSPVIICATSLDEE AETPEVTEDRQPNSLSSEEPPTSEDQVGREDSALARWAADPANTAWMENPEEAIYDDV PRENSDSEPDEMIYDDVENGDEGGNSSLEYGWSSSEFESYEEQSDSECKNGIPRSFLR SNHKKQMQKLVKAAKDGTKDGLERTRAAVKRGRSFIRTKSLIAQDHRSSLEEEQNFFI DVDCKHPEAILTPMPEGLSQQQVVRRYILGSVVDSEKNYVDALKRILEQYEKPLSEME PKVLSERKLKTVFYRVKEILQCHSLFQIALASRVSEWDSVEMIGDVFVASFSKSMVLD AYSEYVNNFSTAVAVLKKTCATKPAFLEFLKQEQEASPDRTTLYSLMMKPIQRFPQFI LLLQDMLKNTSKGHPDRLPLQMALTELETLAEKLNERKRDADQRCEVKQIAKAINERY LNKLLSSGSRYLIRSDDMIETVYNDRGEIVKTKERRVFMLNDVLMCATVSSRPSHDSR VMSSQRYLLKWSVPLGHVDAIEYGSSAGTGEHSRHLAVHPPESLAVVANAKPNKVYMG PGQLYQDLQNLLHDLNVIGQITQLIGNLKGNYQNLNQSVAHDWTSGLQRLILKKEDEI RAADCCRIQLQLPGKQDKSGRPTFFTAVFNTFTPAIKESWVNSLQMAKLALEEENHMG WFCVEDDGNHIKKEKHPLLVGHMPVMVAKQQEFKIECAAYNPEPYLNNESQPDSFSTA HGFLWIGSCTHQMGQIAIVSFQNSTPKVIECFNVESRILCMLYVPVEEKRREPGAPPD PETPAVRASDVPTICVGTEEGSISIYKSSQGSKKVRLQHFFTPEKSTVMSLACTSQSL YAGLVNGAVASYARAPDGSWDSEPQKVIKLGVLPVRSLLMMEDTLWAASGGQVFIISV ETHAVEGQLEAHQEEGMVISHMAVSGVGIWIAFTSGSTLRLFHTETLKHLQDINIATP VHNMLPGHQRLSVTSLLVCHGLLMVGTSLGVLVALPVPRLQGIPKVTGRGMVSYHAHN SPVKFIVLATALHEKDKDKSRDSLAPGPEPQDEDQKDALPSGGAGSSLSQGDPDAAIW LGDSLGSMTQKSDLSSSSGSLSLSHGSSSLEHRSEDSTIYDLLKDPVSLRSKARRAKK AKASSALVVCGGQGHRRVHRKARQPHQEELAPTVMVWQIPLLNI" BASE COUNT 1499 a 1363 c 1425 g 1221 t ORIGIN 1 gacgcggggg acgcggggga cggcggggaa cggcggggga cggcggggaa cagcggggga 61 cggcggggaa cagcggggga cggcggggaa cagcagggga ctgcgggtcg cgtcctggcc 121 gccgaggagc tccttccctt aacagagctg agagaggcat ctggagctgc agcatggacc 181 agcgagagcc cctgcctccc gctcctgcag aaaatgaaat gaaatatgat accaataata 241 atgaagagga agagggagaa cagttcgatt ttgacagtgg agatgaaatc ccagaagcgg 301 acagacaggc cccctccgcc cctgagacag gaggtgctgg agccagtgaa gcccctgcac 361 ccacaggagg tgaggatgga gctggagcag aaaccacccc agtggcagag cctactaagc 421 tggtgctccc gatgaaagtc aacccatatt ctgtcatcga catcacgcca ttccaggagg 481 accagccgcc cacccccgtg cccagcgctg aggaggagaa tgtgggtctc catgtgccct 541 gcgggtactt ggtgcctgta ccctgcggct atgcggtgcc ctccaacctg cccctcctgc 601 tgcccgccta ctccagcccg gtcatcatct gcgccacgtc cctggacgaa gaagcagaaa 661 caccagaagt cacagaagat cgccagccca attctctgag ttccgaggag cctccaacca 721 gtgaagatca agtcggtcga gaggacagcg cacttgcccg ctgggccgca gacccggcca 781 acacagcctg gatggagaat ccagaggaag caatttacga tgacgttcca agggaaaact 841 cagactctga accagatgaa atgatttatg atgatgttga gaatggggat gaaggtggaa 901 acagctcctt ggaatacgga tggagttcga gtgaatttga aagttacgaa gagcagagtg 961 actcggagtg caagaatggg attcccaggt ccttcctgcg cagcaaccac aaaaagcaaa 1021 tgcagaagct cgtgaaggcc gcgaaggacg gcaccaagga cgggctggag aggaccaggg 1081 cagccgtgaa gaggggccgc tccttcatca ggaccaagtc tctcatcgca caggatcaca 1141 gatcttctct tgaggaagaa cagaatttct tcattgatgt tgactgcaag cacccggaag 1201 ccatcttgac cccgatgccc gagggtttat ctcagcagca ggttgtaaga agatatatac 1261 tgggttcagt tgtcgacagt gaaaagaact acgtagatgc tcttaagagg attttggagc 1321 aatatgagaa gccgctgtct gagatggagc caaaggttct gagtgagagg aagctgaaga 1381 cggtgttcta ccgagtcaaa gagatcctgc agtgccactc gctatttcag atcgcgctgg 1441 ccagccgcgt ttccgagtgg gactccgtgg aaatgatagg cgatgtcttc gtggcttcgt 1501 tttctaagtc catggtgctg gatgcataca gtgaatatgt gaacaatttc agcacagccg 1561 tggcagtcct caagaaaaca tgtgccacaa agcccgcttt tcttgaattt ttaaagcagg 1621 aacaggaggc cagccccgat cgaaccacgc tctacagcct gatgatgaag cccatccaga 1681 ggttcccaca gttcatcctc ctgcttcagg acatgctgaa gaacacctcc aaaggccacc 1741 ccgacaggct gcctcttcag atggccctga cagagctcga aacactagca gagaagttaa 1801 atgaaagaaa gagagatgct gatcaacgct gtgaagtgaa gcaaatagcc aaagccataa 1861 acgaaagata cctgaacaag cttctcagca gtggaagccg atacctcatt cgatcagatg 1921 atatgataga aacagtttac aacgacagag gagagattgt taaaaccaaa gaacgccgag 1981 tcttcatgtt aaatgatgtg ttaatgtgtg ccaccgtcag ctcacgcccc tctcatgaca 2041 gccgtgtgat gagcagccag aggtacttgc tgaagtggag cgttccactg ggacatgtgg 2101 acgccatcga gtatggcagc agcgcaggca cgggcgagca cagcaggcac cttgccgttc 2161 acccgccgga gagcctggcc gtggttgcta acgcgaaacc aaacaaagtt tacatggggc 2221 caggacaact gtatcaagat ttacaaaact tgttgcatga cttaaatgta attggccaaa 2281 tcactcagct gataggaaac cttaaaggaa actatcagaa cttaaaccag tcagtagccc 2341 atgactggac atcaggttta caaaggctta ttttgaagaa agaagatgaa atcagagctg 2401 cggactgctg cagaattcag ttacagcttc ccgggaagca ggacaaatct gggcgaccga 2461 cgttctttac agctgtgttc aatacgttca cccctgccat caaggagtcc tgggtcaaca 2521 gcttacagat ggccaagctc gccctagaag aggagaacca catgggctgg ttctgtgtgg 2581 aagacgatgg gaatcacatt aaaaaggaga agcatcctct cctcgtcgga cacatgcccg 2641 tgatggtggc caagcagcag gagttcaaga ttgaatgtgc tgcttataac cctgaacctt 2701 acctaaataa tgaaagccag ccagattcat tttccacggc acatggtttc ctgtggatcg 2761 gaagttgcac ccatcaaatg ggtcagattg ccatcgtctc gtttcaaaat tccactccca 2821 aagtcattga gtgcttcaac gtggaatctc gcatcctgtg catgctgtac gttcccgtcg 2881 aggagaagcg cagagagcct ggggcacccc cggaccccga gaccccggcc gtgagagctt 2941 ctgatgtccc cacgatctgt gtagggacgg aggagggaag catttccatt tataaaagca 3001 gtcaaggctc caagaaagtg agacttcagc actttttcac tcctgagaag tccacagtca 3061 tgagcctggc ttgcacgtct cagagcctgt acgctggcct ggtcaacggg gcagtcgcca 3121 gctacgccag agccccagat ggatcctggg attcagaacc tcaaaaagtg atcaagttag 3181 gcgtcctacc agttagaagt ctactcatga tggaagacac gttgtgggcg gcttccggag 3241 gtcaagtctt catcatcagt gtggagactc atgctgtaga gggtcagctg gaggcccacc 3301 aggaggaagg catggtgatc tcccacatgg ccgtgtccgg cgtcgggatc tggattgcct 3361 tcacctcagg gtccacgctc cgcctttttc acacggaaac tctcaagcac ctgcaggaca 3421 tcaacatcgc cacccctgtt cacaacatgc tgccagggca ccagcggctg tcggtgacga 3481 gcctgctcgt ctgccacgga ttgctgatgg tcggcaccag cctgggagtc ctcgtggccc 3541 tgccggtccc acgtctgcaa gggattccca aagtgaccgg aagaggcatg gtctcctacc 3601 atgcacacaa cagtcctgtc aaattcatcg tcctggccac ggctctgcac gagaaagaca 3661 aggacaaatc cagggacagc ctggctcctg gccccgagcc tcaggacgaa gaccagaagg 3721 acgcacttcc gagtggagga gctggttcat ctctgagcca gggtgaccct gacgcagcca 3781 tctggttggg agattcgctg ggatcgatga ctcagaaaag cgacctgtcc tcctcatctg 3841 ggtccctgag cttgtctcac ggctccagct ctctagagca cagatcagag gacagcacca 3901 tctatgatct cctgaaggat cctgtctcgc tgagaagcaa agcacgccgg gccaagaaag 3961 ccaaggccag ctcggcgctg gtggtctgtg gagggcaggg ccaccgccgg gtgcacagga 4021 aggcccggca gccccaccag gaagagctgg cgccgaccgt catggtctgg cagatccctc 4081 tgctgaatat ataagcagga cggccgcctt ctgctgtcag aatttgcaat caagggtgac 4141 ttctcagcta atcctacagc ctgagtggtt aagctgtgtc tacactggtt gggaataaat 4201 taaaaacagt atttggggga gaaacgtgca atagcgtaat ggtggtgtcc ctgccaattc 4261 cttccttctc ttctgtacag cagaagtaat tacaagcact tctcacgaag gcagaagact 4321 gatgcaattt tcgagtaatt gagtgcagtt ctgggaaaat accacattct ttttgactgc 4381 tgtagtccat atatgaatac taaatgttaa acttcatcag cgtcagacct attgtatcat 4441 attagagaat ttgcagacta agaatttatg agaaaatata tgtattcagt agtgcaggca 4501 tttattaaca attcttaaaa gttttacctg attcagattc acgactttta tttatattct 4561 atatttttga atttcagagt aaaatttgtt aacaatttta aaagccaggt aacacctacc 4621 agtccagtta gcatgatttg ctttcagaag tgagctgggt tttccaaagt ggtataatgt 4681 gtgtactgta tattttaaca aagtaatatt tttgtattgc atttttctat taaaaaatta 4741 acagttaatg tttcagtcaa tgtattatct gtagcatttc acaaataatg tttgctttga 4801 accaaaatgc tcagtgccta tcaacatttg gactcaagca tcaacaccaa attattcctc 4861 ccttctcgta taaatagagt gactatccac aggagaaaag tgtgtgcttt agtattagag 4921 gagataggca gagaagtctt gcttagttcc ttcgtgcagc ttcttgcccc tgttgacgtg 4981 gaatgctgtg tctgctttag cacgcacgct ccgaatgact cctggtgcta ggccatgctg 5041 gctgctgtca ctgagcggga ctcaggccaa gaggcgtgac ctcgggccag cctgtctgtt 5101 gtgcagacgc ctcctctgca gaacgcatca gtttctattc tgcagttgca gagccagccc 5161 cgcgtgagaa cgtgcataat gagtgcacac catcatgtca aggtgcatac ttagtgagcg 5221 ccatcctgct gaacgtgtat ttcagtgttt cacttactgg acggataaca agaaaaaaat 5281 cctaacacag gcagtcacca gaaataaatg tctcagcact ttacagatga ctaaaaatgt 5341 taattttatg acttagccaa atatgttcta ggttgcatat atcccccatg tgaaagtgat 5401 ttcttcccaa gcttctcaaa ctgttagctg ctgtctgact tcatcaataa agtattttta 5461 ttttaaaatg caaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa //