LOCUS       BC112897                2971 bp    mRNA    linear   HUM 20-JUL-2007
DEFINITION  Homo sapiens C-type lectin domain family 16, member A, mRNA (cDNA
            clone MGC:111457 IMAGE:4419248), complete cds.
ACCESSION   BC112897
VERSION     BC112897.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2971)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2971)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2006) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Lou Staudt
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 217 Row: h Column: 4
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 54792781.
FEATURES             Location/Qualifiers
     source          1..2971
                     /db_xref="H-InvDB:HIT000340496"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:111457 IMAGE:4419248"
                     /tissue_type="Lymph, lymphoma"
                     /clone_lib="NIH_MGC_85"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            1..2971
                     /gene="CLEC16A"
                     /gene_synonym="Gop-1"
                     /db_xref="GeneID:23274"
                     /db_xref="HGNC:HGNC:29013"
     CDS             138..2858
                     /gene="CLEC16A"
                     /gene_synonym="Gop-1"
                     /codon_start=1
                     /product="CLEC16A protein"
                     /protein_id="AAI12898.1"
                     /db_xref="GeneID:23274"
                     /db_xref="HGNC:HGNC:29013"
                     /translation="MFGRSRSWVGGGHGKTSRNIHSLDHLKYLYHVLTKNTTVTEQNR
                     NLLVETIRSITEILIWGDQNDSSVFDFFLEKNMFVFFLNILRQKSGRYVCVQLLQTLN
                     ILFENISHETSLYYLLSNNYVNSIIVHKFDFSDEEIMAYYISFLKTLSLKLNNHTVHF
                     FYNEHTNDFALYTEAIKFFNHPESMVRIAVRTITLNVYKVDNQAMLHYIRDKTAVPYF
                     SNLVWFIGSHVIELDDCVQTDEEHRNRGKLSDLVAEHLDHLHYLNDILIINCEFLNDV
                     LTDHLLNRLFLPLYVYSLENQDKGGERPKISLPVSLYLLSQVFLIIHHAPLVNSLAEV
                     ILNGDLSEMYAKTEQDIQRSSAKPSIRCFIKPTETLERSLEMNKHKGKRRVQKRPNYK
                     NVGEEEDEEKGPTEDAQEDAEKAKEIEMVIMERSKLSELAASTSVQEQNTTDEEKSAA
                     ATCSESTQWSRPFLDMVYHALDSPDDDYHALFVLCLLYAMSHNKGMDPEKLERIQLPV
                     PNAAEKTTYNHPLAERLIRIMNNAAQPDGKIRLATLELSCLLLKQQVLMSAGCIMKDV
                     HLACLEGAREESVHLVRHFYKGEDIFLDMFEDEYRSMTMKPMNVEYLMMDASILLPPT
                     GTPLTGIDFVKRLPCGDVEKTRRAIRVFFMLRSLSLQLRGEPETQLPLTREEDLIKTD
                     DVLDLNNSDLIACTVITKDGGMVQRFLAVDIYQMSLVEPDVSRLGWGVVKFAGLLQDM
                     QVTGVEDDSRALNITIHKPASSPHSKPFPILQATFIFSDHIRCIIAKQRLAKGRIQAR
                     RMKMQRIAALLDLPIQPTTEVLGFGLGSSTSTQHLPFRFYDQGRRGSSDPTVQRSVFA
                     SVDKVPGEPAPRPAPQLVHHGGRSRSFSLWSLCELPFLSQKPRRLAAPAS"
BASE COUNT          759 a          809 c          754 g          649 t
ORIGIN      
        1 cggggaggaa ggcggctcgc ggttcctcca ccgcctccgc cgccgcatcc tccgcttgtg
       61 ctaccgccgc gggcgctggg ccgctctgct ggtccggcat gagaccgtga gacgagagac
      121 gggtcggggc cgccgacatg tttggccgct cgcggagctg ggtgggcggg ggccatggca
      181 agacttcccg caacatccac tccttggacc acctcaagta tctgtaccac gttttgacca
      241 aaaacaccac agtcacagaa cagaaccgga acctgctagt ggagaccatc cgttccatca
      301 ctgagatcct gatctgggga gatcaaaatg acagctctgt atttgacttc ttcctggaga
      361 agaatatgtt tgttttcttc ttgaacatct tgcggcaaaa gtcgggccgt tacgtgtgcg
      421 ttcagctgct gcagaccttg aacatcctct ttgagaacat cagtcacgag acctcacttt
      481 attatttgct ctcaaataac tacgtaaatt ctatcatcgt tcataaattt gacttttctg
      541 atgaggagat tatggcctat tatatatcgt tcctgaaaac actttcgtta aaactcaaca
      601 accacactgt ccatttcttt tataatgagc acaccaatga ctttgccctg tacacagaag
      661 ccatcaagtt tttcaaccac cctgaaagca tggttagaat tgctgtaaga accataactt
      721 tgaatgtcta taaagtggat aaccaggcca tgctgcacta catccgagat aaaactgctg
      781 ttccttactt ctccaatttg gtctggttca ttgggagcca tgtgatcgaa ctcgatgact
      841 gcgtgcagac tgatgaggag catcggaatc ggggtaaact gagtgatctg gtggcagagc
      901 acctagacca cctgcactat ctcaatgaca tcctgatcat caactgtgag ttcctcaacg
      961 atgtgctcac tgaccacctg ctcaacaggc tcttcctgcc cctctacgtg tactcactgg
     1021 agaaccagga caagggagga gaacggccga aaattagcct gccggtgtct ctttatcttc
     1081 tgtcacaggt cttcttaatt atacatcatg caccgctggt gaactcgtta gctgaagtca
     1141 ttctgaatgg tgatctgtct gagatgtacg ctaagactga acaggatatt cagagaagtt
     1201 ctgccaagcc cagcattcgg tgcttcatta aacccaccga gacactcgag cggtcccttg
     1261 agatgaacaa gcacaagggc aagaggcggg tgcaaaagag acccaactac aaaaacgttg
     1321 gggaagaaga agatgaggag aaagggccca ccgaggatgc ccaagaagac gccgagaagg
     1381 ctaaagagat cgagatggtg atcatggagc gtagcaagct ctcagagctg gccgccagca
     1441 cctccgtgca ggagcagaac accacggacg aggagaaaag cgccgccgcc acctgctctg
     1501 agagcacgca atggagcaga cccttcctgg atatggtgta ccacgcgctg gacagcccgg
     1561 atgatgatta ccatgccctg ttcgtgctct gcctcctcta tgccatgtct cataataaag
     1621 gcatggatcc tgaaaaatta gagcgaatcc agctccccgt gccaaatgcg gccgagaaga
     1681 ccacctacaa ccacccgcta gctgaaagac tcatcaggat catgaacaat gctgcccagc
     1741 cagatgggaa gatccggctg gcgacgctgg agctgagctg cctgcttctg aagcagcaag
     1801 tcctgatgag tgctggctgc atcatgaagg acgtgcacct ggcctgcctg gagggtgcga
     1861 gagaagaaag tgttcacctt gtacgacatt tttataaggg agaagacatt tttttggaca
     1921 tgtttgaaga tgagtatagg agcatgacaa tgaagcccat gaacgtggaa tatctcatga
     1981 tggacgcctc catcctgctg cccccaacag gcacgccact gacgggcatt gacttcgtga
     2041 agcggctgcc gtgtggcgat gtggagaaga cccggcgggc catccgggta ttcttcatgc
     2101 tgcgttccct gtcactgcaa ttgcgagggg agcctgagac acagttgccg ctgactcggg
     2161 aggaggacct gatcaagact gatgatgtcc tggatctgaa taacagcgac ttgattgcat
     2221 gtacagtgat caccaaggat ggcggcatgg tccagcgatt cctggctgtg gatatttacc
     2281 agatgagttt ggtggagcct gatgtgtcca ggcttggctg gggagtggtc aagtttgcag
     2341 gcctattgca ggacatgcag gtgactggcg tggaggacga cagccgtgcc ctgaacatca
     2401 ccatccacaa gcctgcgtcc agcccccatt ccaagccctt ccccatcctc caggccacct
     2461 tcatcttctc agaccacatc cgctgcatca tcgccaagca gcgcctggcc aaaggccgca
     2521 tccaggcaag gcgcatgaag atgcagagaa tagctgccct cctggacctc ccaatccagc
     2581 ccaccactga agtcctgggg tttggactcg gctcctccac ctccactcag cacctgcctt
     2641 tccgcttcta cgaccagggg cgccggggca gcagcgaccc cacagtgcag cgctccgtgt
     2701 ttgcatcggt ggacaaggtg ccaggtgagc cagccccccg ccctgcgcca cagctcgttc
     2761 atcatggtgg gcgttcaagg tctttctctc tgtggagcct gtgtgagctg cccttcctct
     2821 ctcagaagcc ccgtcggctg gcagcaccag cttcttagaa tttgtcaaag cacagcgcaa
     2881 gattaaacac agcccccaaa ataaattttg gctttccctt taaaaaaaaa aaaaaaaaaa
     2941 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
//