LOCUS BC112721 1836 bp mRNA linear MAM 23-JAN-2007
DEFINITION Bos taurus tripartite motif-containing 63, mRNA (cDNA clone
MGC:137423 IMAGE:8178900), complete cds.
ACCESSION BC112721
VERSION BC112721.1
KEYWORDS MGC.
SOURCE Bos taurus (cattle)
ORGANISM Bos taurus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
Pecora; Bovidae; Bovinae; Bos.
REFERENCE 1 (bases 1 to 1836)
AUTHORS Moore,S., Alexander,L., Brownstein,M., Guan,L., Lobo,S., Meng,Y.,
Tanaguchi,M., Wang,Z., Yu,J., Prange,C., Schreiber,K., Shenmen,C.,
Wagner,L., Bala,M., Barbazuk,S., Barber,S., Babakaiff,R.,
Beland,J., Chun,E., Del Rio,L., Gibson,S., Hanson,R.,
Kirkpatrick,R., Liu,J., Matsuo,C., Mayo,M., Santos,R.R., Stott,J.,
Tsai,M., Wong,D., Siddiqui,A., Holt,R., Jones,S.J. and Marra,M.A.
TITLE Direct Submission
JOURNAL Submitted (31-JAN-2006) BC Cancer Agency, Canada's Michael Smith
Genome Sciences Centre, Suite 100, 570 West 7th Avenue, Vancouver,
British Columbia V5Z 4S6, Canada
REMARK NIH-MGC Project
COMMENT Contact: Robert Kirkpatrick
Canada's Michael Smith Genome Sciences Centre
BC Cancer Agency
Suite 100, 570 West 7th Avenue, Vancouver, British Columbia,
Canada, V5Z 4S6
Tel: 1-604-707-5900 x5406
Fax: 1-604-876-3561
Email: robertk@bcgsc.ca
Tissue Procurement: Y. Meng, M. Taniguchi, S. Lobo, L. Guan and S.
Moore
cDNA Library Preparation: M. Masaaki, Y. Meng, S. Lobo, L. Guan
and Dr. S. Moore
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Bovine Genome Sequencing Program, Genome
Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y,
Taniguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L,
Ali J, Bala M, Barber S, Babakaiff R, Beland J, Chand S, Chun E,
Del Rio L, Gibson S, Kirkpatrick R, Liu J, Matsuo C, Mayo M,
Palmquist D, Santos RR, Stott J, Tsai M, Wong D, Wynhoven B, Hanson
R, Siddiqui A, Holt R, Jones SJ, Marra MA
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 263 Row: o Column: 3.
FEATURES Location/Qualifiers
source 1..1836
/organism="Bos taurus"
/mol_type="mRNA"
/strain="Hereford"
/db_xref="taxon:9913"
/clone="MGC:137423 IMAGE:8178900"
/tissue_type="Heart ventrical, 8.5 month female Hereford"
/clone_lib="GC_BGC-12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6.0"
gene 1..1836
/gene="TRIM63"
/db_xref="GeneID:528912"
CDS 136..1203
/gene="TRIM63"
/codon_start=1
/product="tripartite motif-containing 63"
/protein_id="AAI12722.1"
/db_xref="GeneID:528912"
/translation="MDYKSSLIQDGNPMENLEKQLICPICLEMFTKPVVILPCQHNLC
RKCANDIFQQAANPYWTGRVGSAAMSGGRFRCPSCRHEVIMDRHGVYGLQRNLLVENI
IDIYKQECSSRPLQKGSHPMCKEHEDEKINIYCLTCEVPTCSMCKVFGAHKACEVAPL
QSVFQGQKTELSNCISMLVAGNDRVQTIITQLEDSCRVTKENSHQVKEELSQKFDTLY
AILDEKKSELLQRITREQEEKLGFLEALIQQYREQLDKSTKLVETAIQSLDEPGGAIF
LLSAKQLIRSIVEASKGCQLGKIEQGFENMDYFTLDLEHVADTLRTIDFGTDEEEEEF
IQEEEDHEEEESTEGKEEGHQ"
BASE COUNT 520 a 420 c 529 g 367 t
ORIGIN
1 agagtttggg caccaggaga ggaaggcaaa gaggctccgg gcgggtattc tgtaacaaag
61 acccccaggt ctgcttagag caaggcaggt gaaggaggca gccaggtggg tccccacgtc
121 tgtctccagg acaacatgga ttataagtcg agcctgatcc aggatggaaa ccccatggag
181 aacctggaga agcagctgat ctgccccatc tgcctggaga tgtttaccaa gccggtggtc
241 atcttgccgt gccagcacaa cctctgccgg aagtgtgcca acgacatctt ccagcaggct
301 gccaatccct attggactgg ccgggttggc tccgcggcca tgtctggagg ccgtttccgc
361 tgcccttcct gccgccacga ggtgatcatg gaccgccacg gagtgtacgg cctgcagcgg
421 aatctgctgg tggagaacat cattgacatc tacaaacagg agtgctccag ccggccgctg
481 cagaagggca gccaccccat gtgcaaggag cacgaagatg agaaaatcaa catctactgc
541 ctcacgtgcg aggtgcccac gtgctccatg tgcaaggtgt tcggagccca caaggcctgc
601 gaggtggccc cactgcagag tgtcttccag ggacagaaga ctgagctgag taactgcatc
661 tccatgctgg tggcagggaa tgaccgtgtg cagaccatca tcactcagct agaggactcc
721 tgtcgagtga ccaaggagaa cagtcaccag gtgaaagaag aactgagcca gaagtttgac
781 acgctgtacg ccatcctgga cgagaagaag agcgagctgc tgcagcggat cacgcgcgag
841 caggaggaga agcttggctt ccttgaggcc ctcatccagc agtaccggga gcaactggac
901 aagtccacca agctggtgga gacagccatc cagtctctgg acgagcccgg tggcgccatc
961 ttcctcttga gtgccaagca gctcatcaga agcatcgtgg aagcttccaa gggttgccag
1021 ctggggaaga tagagcaggg ctttgaaaac atggactact ttactttgga cttagagcac
1081 gtagctgaca ccctgaggac catcgacttt gggacagatg aggaagagga ggagttcatt
1141 caagaagaag aagatcatga agaggaagag tccacagagg ggaaggaaga aggacaccag
1201 taaggcgatg atgagggaga gaccctctag atgcagagag accggggagg gtggggatgg
1261 gcccagctgc cttagtgaca ggcccagggt gggaggggtc agggcccctg gcggggcaac
1321 ggggaggtgt gtcttctctc tgctcagaga gcaggaacta ggagtaggac cccaccgctg
1381 tgtccagcgt tgcgaaccag aattggaaac gtgcttgaaa caaccacact ggattctttt
1441 ctacgttggt gcaaaatgga atattttgta cattttttaa atgtgatttt tgtatacttg
1501 tatatgtatg ccaatttggt gctttttgta aaggaacttt tgtatgataa tgtctggtca
1561 ttgtgtgact ggcgattgtt ataaagaagg gaaggaagcc aggttgatac agctgcccac
1621 ttcctctcct tggtgggtta gcactcacag gtccaggaaa ggataatgta ctgtatttca
1681 gtgtctatac cccacataag ggacggtgac cgagtttgtg ttatatgttg ttttaataaa
1741 tgcacagcgc tttcttccaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1801 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
//