LOCUS BC112358 1446 bp mRNA linear HUM 21-JAN-2006 DEFINITION Homo sapiens potassium inwardly-rectifying channel, subfamily J, member 11, mRNA (cDNA clone MGC:133230 IMAGE:40032947), complete cds. ACCESSION BC112358 VERSION BC112358.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1446) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1446) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (20-JAN-2006) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Baylor Human Genome Sequencing Center cDNA Library Preparation: Baylor Human Genome Sequencing Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAM Plate: 17 Row: j Column: 12. FEATURES Location/Qualifiers source 1..1446 /db_xref="H-InvDB:HIT000340477" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:133230 IMAGE:40032947" /tissue_type="PCR rescued clones" /clone_lib="NIH_MGC_283" /note="Vector: pCR-Blunt II-TOPO with reversed insert; Clone identification sequence tag: AGATTTC" gene 1..1446 /gene="KCNJ11" /gene_synonym="BIR" /gene_synonym="IKATP" /gene_synonym="KIR6.2" /gene_synonym="PHHI" /db_xref="GeneID:3767" /db_xref="HGNC:HGNC:6257" /db_xref="IMGT/GENE-DB:6257" /db_xref="MIM:600937" CDS 101..1273 /gene="KCNJ11" /gene_synonym="BIR" /gene_synonym="IKATP" /gene_synonym="KIR6.2" /gene_synonym="PHHI" /codon_start=1 /product="potassium inwardly-rectifying channel J11" /protein_id="AAI12359.1" /db_xref="GeneID:3767" /db_xref="HGNC:HGNC:6257" /db_xref="IMGT/GENE-DB:6257" /db_xref="MIM:600937" /translation="MLSRKGIIPEEYVLTRLAEDPAEPRYRARQRRARFVSKKGNCNV AHKNIREQGRFLQDVFTTLVDLKWPHTLLIFTMSFLCSWLLFAMAWWLIAFAHGDLAP SEGTAEPCVTSIHSFSSAFLFSIEVQVTIGFGGRMVTEECPLAILILIVQNIVGLMIN AIMLGCIFMKTAQAHRRAETLIFSKHAVIALRHGRLCFMLRVGDLRKSMIISATIHMQ VVRKTTSPEGEVVPLHQVDIPMENGVGGNSIFLVAPLIIYHVIDANSPLYDLAPSDLH HHQDLEIIVILEGVVETTGITTQARTSYLADEILWGQRFVPIVAEEDGRYSVDYSKFG NTIKVPTPLCTARQLDEDHSLLEALTLASARGPLRKRSVPMAKAKPKFSISPDSLS" BASE COUNT 274 a 499 c 399 g 274 t ORIGIN 1 tgagaaggtg cccaccgaga ggactctgca gtgaggccct aggccacgtc cgaggggtgc 61 ctccgatggg ggaagcccct ccctgggggt caccggagcc atgctgtccc gcaagggcat 121 catccccgag gaatacgtgc tgacacgcct ggcagaggac cctgccgagc ccaggtaccg 181 tgcccgccag cggagggccc gctttgtgtc caagaaaggc aactgcaacg tggcccacaa 241 gaacatccgg gagcagggcc gcttcctgca ggacgtgttc accacgctgg tggacctcaa 301 gtggccacac acattgctca tcttcaccat gtccttcctg tgcagctggc tgctcttcgc 361 catggcctgg tggctcatcg ccttcgccca cggtgacctg gcccccagcg agggcactgc 421 tgagccctgt gtcaccagca tccactcctt ctcgtctgcc ttccttttct ccattgaggt 481 ccaagtgact attggctttg gggggcgcat ggtgactgag gagtgcccac tggccatcct 541 gatcctcatc gtgcagaaca tcgtggggct catgatcaac gccatcatgc ttggctgcat 601 cttcatgaag actgcccaag cccaccgcag ggctgagacc ctcatcttca gcaagcatgc 661 ggtgatcgct ctgcgccacg gccgcctctg cttcatgcta cgtgtgggtg acctccgcaa 721 gagcatgatc atcagcgcca ccatccacat gcaggtggta cgcaagacca ccagccccga 781 gggcgaggtg gtgcccctcc accaggtgga catccccatg gagaacggcg tgggtggcaa 841 cagcatcttc ctggtggccc cgctgatcat ctaccatgtc attgatgcca acagcccact 901 ctacgacctg gcacccagcg acctgcacca ccaccaggac ctcgagatca tcgtcatcct 961 ggaaggcgtg gtggaaacca cgggcatcac cacccaggcc cgcacctcct acctggccga 1021 tgagatcctg tggggccagc gctttgtgcc cattgtagct gaggaggacg gacgttactc 1081 tgtggactac tccaagtttg gcaacaccat caaagtgccc acaccactct gcacggcccg 1141 ccagcttgat gaggaccaca gcctactgga agctctgacc ctcgcctcag cccgcgggcc 1201 cctgcgcaag cgcagcgtgc ccatggccaa ggccaagccc aagttcagca tctctccaga 1261 ttccctgtcc tgagccatgg tctctcgggc cccccacacg cgtgtgtaca cacggaccat 1321 gtggtatgta gcccagccag ggcctggtgt gaggctgggc cagcctcagc tcagcctccc 1381 cctgctgctc atccagggtg ttacaaggca cttgtcacta tgctatttct ggcctcagca 1441 ggaacc //