LOCUS BC112355 2346 bp mRNA linear HUM 21-JAN-2006
DEFINITION Homo sapiens histidine rich calcium binding protein, mRNA (cDNA
clone MGC:133236 IMAGE:40034092), complete cds.
ACCESSION BC112355
VERSION BC112355.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2346)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2346)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-JAN-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 17 Row: j Column: 6.
FEATURES Location/Qualifiers
source 1..2346
/db_xref="H-InvDB:HIT000340474"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:133236 IMAGE:40034092"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: TAAAGACG"
gene 1..2346
/gene="HRC"
/db_xref="GeneID:3270"
/db_xref="HGNC:HGNC:5178"
/db_xref="IMGT/GENE-DB:5178"
/db_xref="MIM:142705"
CDS 153..2252
/gene="HRC"
/codon_start=1
/product="histidine-rich calcium-binding protein,
precursor"
/protein_id="AAI12356.1"
/db_xref="GeneID:3270"
/db_xref="HGNC:HGNC:5178"
/db_xref="IMGT/GENE-DB:5178"
/db_xref="MIM:142705"
/translation="MGHHRPWLHASVLWAGVASLLLPPAMTQQLRGDGLGFRNRNNNT
GVAGLSEEASAELRHHLHSPRDHPDENKDVSTENGHHFWSHPDREKEDEDVSKEYGHL
LPGHRSQDHKVGDEGVSGEEVFAEHGGQARGHRGHGSEDTEDSAEHRHHLPSHRSHSH
QDEDEDEVVSSEHHHHILRHGHRGHDGEDDEGEEEEEEEEEEEEEASTEYGHQAHRHR
GHGSEEDEDVSDGHHHHGPSHRHQGHEEDDDDDDDDDDDDDDDVSIEYRHQAHRHQGH
GIEEDEDVSDGHHHRDPSHRHRSHEEDDNDDDDVSTEYGHQAHRHQDHRKEEVEAVSG
EHHHHVPDHRHQGHRDEEEDEDVSTERWHQGPQHVHHGLVDEEEEEEEITVQFGHYVA
SHQPRGHKSDEEDFQDEYKTEVPHHHHHRVPREEDEEVSAELGHQAPSHRQSHQDEET
GHGQRGSIKEMSHHPPGHTVVKDRSHLRKDDSEEEKEKEEDPGSHEEDDESSEQGEKG
THHGSRDQEDEEDEEEGHGLSLNQEEEEEEDKEEEEEEEDEERREERAEVGAPLSPDH
SEEEEEEEEGLEEDEPRFTIIPNPLDRREEAGGASSEEESGEDTGPQDAQEYGNYQPG
SLCGYCSFCNRCTECESCHCDEENMGEHCDQCQHCQFCYLCPLVCETVCAPGSYVDYF
SSSLYQALADMLETPEP"
BASE COUNT 678 a 603 c 723 g 342 t
ORIGIN
1 ggcagcaagg accagaggaa ggtggacaga gaccgaaagg acaaaggaga gacacagaga
61 aaaaaagaga ccaaccccaa agggacaaag accccaacgt ttgtccacat tgccgcagag
121 gcagctggag ccagtgctgc ctgtccgtcc ccatgggcca ccataggcca tggctgcacg
181 cttctgtcct ctgggctggg gtggccagcc tgctcctccc cccggccatg acccagcagc
241 tcagagggga tgggctgggc ttcagaaacc ggaacaacaa cactggagtc gccgggctct
301 ccgaggaggc atcagcagag cttcgccacc acctccacag ccctagagac catccagatg
361 agaacaagga tgtttccaca gagaatgggc atcatttctg gagccaccca gaccgtgaaa
421 aggaggatga agatgtctcc aaggaatatg ggcacctact cccaggccac aggtcccaag
481 accacaaagt cggagatgag ggtgtctcag gtgaggaggt ctttgcagag catggtgggc
541 aggcccgtgg gcacagaggc cacgggagtg aagacacgga agactcagct gagcacaggc
601 accacctccc cagccacagg agccacagcc atcaagacga ggatgaggat gaagttgtgt
661 ccagtgagca tcaccatcat atcctcaggc atggacaccg aggccatgat ggggaagatg
721 atgaaggaga agaggaggag gaggaggagg aggaggagga agaggaggcc tccactgagt
781 atggacacca ggcccacagg caccgaggcc atgggagtga agaggatgag gatgtctcag
841 atggacacca tcatcatggc cccagccaca ggcaccaagg ccatgaagaa gatgacgatg
901 atgatgatga tgatgatgat gatgatgatg atgatgtctc cattgaatat agacaccagg
961 ctcacaggca ccaaggccac gggattgaag aggatgaaga tgtctcagat ggacaccatc
1021 atcgcgaccc cagccacagg caccgaagcc atgaagaaga tgacaatgat gatgatgatg
1081 tctccactga gtatggacac caggcccaca ggcaccaaga ccacagaaag gaagaggttg
1141 aggctgtctc aggtgaacac caccatcatg tccctgacca caggcaccaa ggccacagag
1201 acgaggaaga agatgaggat gtgtccactg aacgttggca ccagggtccc caacatgtcc
1261 accatggcct tgtagatgag gaagaggaag aagaggagat cacagtccag ttcggccact
1321 atgttgcaag ccaccaacct cgaggccaca agagtgatga agaggacttc caagatgagt
1381 ataaaacaga agtccctcac catcaccacc acagagtccc cagggaggaa gatgaggagg
1441 tctctgctga gcttggccac caggccccca gccacaggca aagccaccaa gatgaagaaa
1501 ctggccatgg tcaaagaggg tccatcaaag agatgagcca tcacccccca ggacacacag
1561 tggtcaagga tagaagccat ttgaggaagg atgattctga ggaggaaaag gagaaggaag
1621 aggaccccgg ctcccatgag gaagacgatg aaagttcaga gcagggagag aaaggcaccc
1681 atcatggcag ccgggaccag gaagatgagg aggatgagga ggaaggtcat ggcctcagcc
1741 tgaaccagga ggaggaagaa gaggaagaca aggaggagga ggaggaggaa gaagacgagg
1801 agaggaggga agagagggct gaggttgggg ccccactgag cccagaccac agcgaggagg
1861 aagaggagga ggaggagggg ctggaggaag atgagccccg cttcaccatc atccccaacc
1921 cactggacag gagagaggag gctggaggtg cctccagcga ggaggaaagc ggtgaggaca
1981 caggtccaca ggatgctcag gagtatggga actaccagcc agggtccctg tgtggctact
2041 gctccttctg caatcgatgc actgaatgtg agagctgtca ctgtgatgag gagaacatgg
2101 gtgagcactg cgaccagtgc cagcactgtc agttctgcta tctctgcccg ctggtctgcg
2161 aaacggtctg cgctccagga agctacgttg actatttctc ctcgtccctt tatcaggccc
2221 tggcagacat gctggaaacg ccggaaccct gacccagtcg ctcgactgcg acgcaggtgt
2281 acctccccct gccttccaac ccctttccac gagctatatt tatttctccg aataaacgtg
2341 ctcccc
//