LOCUS BC112305 955 bp mRNA linear HUM 21-JAN-2006
DEFINITION Homo sapiens hydroxysteroid (17-beta) dehydrogenase 13, mRNA (cDNA
clone MGC:138510 IMAGE:8327773), complete cds.
ACCESSION BC112305
VERSION BC112305.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 955)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 955)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-JAN-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 4 Row: p Column: 11.
FEATURES Location/Qualifiers
source 1..955
/db_xref="H-InvDB:HIT000340434"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:138510 IMAGE:8327773"
/tissue_type="Pooled, cerebellum, bladder, kidney, PCR
rescued clones"
/clone_lib="NIH_MGC_354"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: CATCAGCA"
gene 1..955
/gene="HSD17B13"
/gene_synonym="HMFN0376"
/gene_synonym="NIIL497"
/gene_synonym="SCDR9"
/db_xref="GeneID:345275"
/db_xref="HGNC:HGNC:18685"
/db_xref="IMGT/GENE-DB:18685"
/db_xref="MIM:18685"
CDS 25..927
/gene="HSD17B13"
/gene_synonym="HMFN0376"
/gene_synonym="NIIL497"
/gene_synonym="SCDR9"
/codon_start=1
/product="hydroxysteroid (17-beta) dehydrogenase 13"
/protein_id="AAI12306.1"
/db_xref="GeneID:345275"
/db_xref="HGNC:HGNC:18685"
/db_xref="IMGT/GENE-DB:18685"
/db_xref="MIM:18685"
/translation="MNIILEILLLLITIIYSYLESLVKFFIPQRRKSVAGEIVLITGA
GHGIGRQTTYEFAKRQSILVLWDINKRGVEETAAECRKLGVTAHAYVVDCSNREEIYR
SLNQVKKEVGDVTIVVNNAGTVYPADLLSTKDEEITKTFEVNILGHFWITKALLPSMM
ERNHGHIVTVASVCGHEGIPYLIPYCSSKFAAVGFHRGLTSELQALGKTGIKTSCLCP
VFVNTGFTKNPSTRLWPVLETDEVVRSLIDGILTNKKMIFVPSYINIFLRLQKFLPER
ASAILNRMQNIQFEAVVGHKIKMK"
BASE COUNT 291 a 190 c 225 g 249 t
ORIGIN
1 gaaggaagag gacagagcaa agccatgaac atcatcctag aaatccttct gcttctgatc
61 accatcatct actcctactt ggagtcgttg gtgaagtttt tcattcctca gaggagaaaa
121 tctgtggctg gggagattgt tctcattact ggagctgggc atggaatagg caggcagact
181 acttatgaat ttgcaaaacg acagagcata ttggttctgt gggatattaa taagcgcggt
241 gtggaggaaa ctgcagctga gtgccgaaaa ctaggcgtca ctgcgcatgc gtatgtggta
301 gactgcagca acagagaaga gatctatcgc tctctaaatc aggtgaagaa agaagtgggt
361 gatgtaacaa tcgtggtgaa taatgctggg acagtatatc cagccgatct tctcagcacc
421 aaggatgaag agattaccaa gacatttgag gtcaacatcc taggacattt ttggatcaca
481 aaagcacttc ttccatcgat gatggagaga aatcatggcc acatcgtcac agtggcttca
541 gtgtgcggcc acgaagggat tccttacctc atcccatatt gttccagcaa atttgccgct
601 gttggctttc acagaggtct gacatcagaa cttcaggcct tgggaaaaac tggtatcaaa
661 acctcatgtc tctgcccagt ttttgtgaat actgggttca ccaaaaatcc aagcacaaga
721 ttatggcctg tattggagac agatgaagtc gtaagaagtc tgatagatgg aatacttacc
781 aataagaaaa tgatttttgt tccatcgtat atcaatatct ttctgagact acagaagttt
841 cttcctgaac gcgcctcagc gattttaaat cgtatgcaga atattcaatt tgaagcagtg
901 gttggccaca aaatcaaaat gaaatgaata aataagctcc agccagagat gtatg
//