LOCUS BC112302 667 bp mRNA linear HUM 21-JUL-2006 DEFINITION Homo sapiens interferon, alpha 1, mRNA (cDNA clone MGC:138507 IMAGE:8327770), complete cds. ACCESSION BC112302 VERSION BC112302.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 667) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 667) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (19-JAN-2006) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Mike Brownstein, NIMH cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRCB Plate: 4 Row: p Column: 8. FEATURES Location/Qualifiers source 1..667 /db_xref="H-InvDB:HIT000340431" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:138507 IMAGE:8327770" /tissue_type="Brain, cerebellum, PCR rescued clones" /clone_lib="NIH_MGC_310" /note="Vector: pCR4-TOPO; Clone identification sequence tag: GATAGTGG" gene 1..667 /gene="IFNA1" /gene_synonym="IFL" /gene_synonym="IFN" /gene_synonym="IFN-ALPHA" /gene_synonym="IFNA13" /gene_synonym="IFNA@" /db_xref="GeneID:3439" /db_xref="HGNC:HGNC:5417" /db_xref="MIM:147660" CDS 39..608 /gene="IFNA1" /gene_synonym="IFL" /gene_synonym="IFN" /gene_synonym="IFN-ALPHA" /gene_synonym="IFNA13" /gene_synonym="IFNA@" /codon_start=1 /product="interferon, alpha 1" /protein_id="AAI12303.1" /db_xref="GeneID:3439" /db_xref="HGNC:HGNC:5417" /db_xref="MIM:147660" /translation="MASPFALLMVLVVLSCKSSCSLGCDLPETHSLDNRRTLMLLAQM SRISPSSCLMDRHDFGFPQEEFDGNQFQKAPAISVLHELIQQIFNLFTTKDSSAAWDE DLLDKFCTELYQQLNDLEACVMQEERVGETPLMNADSILAVKKYFRRITLYLTEKKYS PCAWEVVRAEIMRSLSLSTNLQERLRRKE" BASE COUNT 179 a 172 c 153 g 163 t ORIGIN 1 ccatctcagc aagcccagaa gtatctgcaa tatctacgat ggcctcgccc tttgctttac 61 tgatggtcct ggtggtgctc agctgcaagt caagctgctc tctgggctgt gatctccctg 121 agacccacag cctggataac aggaggacct tgatgctcct ggcacaaatg agcagaatct 181 ctccttcctc ctgtctgatg gacagacatg actttggatt tccccaggag gagtttgatg 241 gcaaccagtt ccagaaggct ccagccatct ctgtcctcca tgagctgatc cagcagatct 301 tcaacctctt taccacaaaa gattcatctg ctgcttggga tgaggacctc ctagacaaat 361 tctgcaccga actctaccag cagctgaatg acttggaagc ctgtgtgatg caggaggaga 421 gggtgggaga aactcccctg atgaatgcgg actccatctt ggctgtgaag aaatacttcc 481 gaagaatcac tctctatctg acagagaaga aatacagccc ttgtgcctgg gaggttgtca 541 gagcagaaat catgagatcc ctctctttat caacaaactt gcaagaaaga ttaaggagga 601 aggaataaca tctggtccaa catgaaaaca attcttattg actcatacac caggtcacgc 661 tttcatg //