LOCUS BC112288 3572 bp mRNA linear HUM 21-JAN-2006
DEFINITION Homo sapiens KIAA1429, transcript variant 2, mRNA (cDNA clone
MGC:138493 IMAGE:8327756), complete cds.
ACCESSION BC112288
VERSION BC112288.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3572)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3572)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-JAN-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 4 Row: o Column: 18.
FEATURES Location/Qualifiers
source 1..3572
/db_xref="H-InvDB:HIT000340417"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:138493 IMAGE:8327756"
/tissue_type="Cerebellum, Uterus, Testis, PCR rescued
clones"
/clone_lib="NIH_MGC_338"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: CGTGGGAG"
gene 1..3572
/gene="KIAA1429"
/gene_synonym="DKFZP434I116"
/gene_synonym="MSTP054"
/db_xref="GeneID:25962"
/db_xref="HGNC:HGNC:24500"
/db_xref="IMGT/GENE-DB:24500"
/db_xref="MIM:24500"
CDS 84..3527
/gene="KIAA1429"
/gene_synonym="DKFZP434I116"
/gene_synonym="MSTP054"
/codon_start=1
/product="hypothetical protein LOC25962, isoform 2"
/protein_id="AAI12289.1"
/db_xref="GeneID:25962"
/db_xref="HGNC:HGNC:24500"
/db_xref="IMGT/GENE-DB:24500"
/db_xref="MIM:24500"
/translation="MAVDSAMELLFLDTFKHPSAEQSSHIDVVRFPCVVYINEVRVIP
PGVRAHSSLPDNRAYGETSPHTFQLDLFFNNVSKPSAPVFDRLGSLEYDENTSIIFRP
NSKVNTDGLVLRGWYNCLTLAIYGSVDRVISHDRDSPPPPPPPPPPPQPQPSLKRNPK
HADGEKEDQFNGSPPRPQPRGPRTPPGPPPPDDDEDDPVPLPVSGDKEEDAPHREDYF
EPISPDRNSVPQEGQYSDEGEVEEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDSIPE
EEEEDEEEEGEEDEEGEGDDGYEQISSDEDGIADLERETFKYPNFDVEYTAEDLASVP
PMTYDPYDRELVPLLYFSCPYKTTFEIEISRMKDQGPDKENSGAIEASVKLTELLDLY
REDRGAKWVTALEEIPSLIIKGLSYLQLKNTKQDSLGQLVDWTMQALNLQVALRQPIA
LNVRQLKAGTKLVSSLAECGAQGVTGLLQAGVISGLFELLFADHVSSSLKLNAFKALD
SVISMTEGMEAFLRGRQNEKSGYQKLLELILLDQTVRVVTAGSAILQKCHFYEVLSEI
KRLGDHLAEKTSSLPNHSEPDHDTDAGLERTNPEYENEVEASMDMDLLESSNISEGEI
ERLINLLEEVFHLMETAPHTMIQQPVKSFPTMARITGPPERDDPYPVLFRYLHSHHFL
ELVTLLLSIPVTSAHPGVLQATKDVLKFLAQSQKGLLFFMSEYEATNLLIRALCHFYD
QDEEEGLQSDGVIDDAFALWLQDSTQTLQCITELFSHFQRCTASEETDHSDLLGTLHN
LYLITFNPVGRSAVGHVFSLEKNLQSLITLMEYYSKEALGDSKSKKSVAYNYACILIL
VVVQSSSDVQMLEQHAASLLKLCKADENNAKLQELGKWLEPLKNLRFEINCIPNLIEY
VKQNIDNLMTPEGVGLTTALRVLCNVACPPPPVEGQQKDLKWNLAVIQLFSAEGMDTF
IRVLQKLNSILTQPWRLHVNMGTTLHRVTTISMARCTLTLLKTMLTELLRGGSFEFKD
MRVPSALVTLHMLLCSIPLSGRLDSDEQKIQNDIIDILLTFTQGVNEKLTISEETLAN
NTWSLMLKEVLSSILKVPEGFFSGLILLSELLPLPLPMQTTQVSLPYNMHLINDCSNT
F"
BASE COUNT 1082 a 723 c 773 g 994 t
ORIGIN
1 gaattcgccc ttctgagtcg ctgtcgcgga ggctggagcg ctgccccgga agtcctcccc
61 cctgttcccc gcccgcggca aacatggcgg tggactcggc gatggagctg ttatttttag
121 atacttttaa acacccgagc gctgagcaaa gttctcatat agatgtggtt cgttttccat
181 gtgtggttta tatcaatgaa gtccgagtca tacccccagg agtaagagcc catagcagtc
241 tgccagacaa tagagcatat ggagagacat ctccccatac atttcaatta gacttattct
301 tcaacaatgt aagcaaacca agtgcccctg ttttcgatag gttgggaagc ctggaatatg
361 atgagaatac ttccatcatc tttagaccta actcaaaggt gaatactgat ggtctggtgc
421 taagaggctg gtataactgt ctgacactgg caatatatgg atcagtggat agagtgataa
481 gtcatgacag agactctcca ccaccaccac ctccaccgcc accacctccc cagccacaac
541 caagtttgaa aaggaatcca aaacatgctg atggggagaa agaagatcag tttaatggaa
601 gccctccaag accacagcca aggggaccaa gaactcctcc aggaccccct ccacctgatg
661 atgatgaaga tgatcctgtg cctctgccag tgtctggtga caaggaagag gatgctcctc
721 atagagaaga ttactttgag cccatttctc ctgatcggaa ttctgttccc caggaagggc
781 aatattctga tgaaggagaa gtagaagagg aacaacaaga agaaggagaa gaagatgaag
841 atgatgtgga tgtagaggaa gaagaggatg aggatgagga tgatcgacga acagtagaca
901 gtattcctga ggaggaagag gaagatgaag aggaagaagg tgaagaggat gaagaaggtg
961 aaggggatga tggttatgaa caaatttcca gtgatgaaga tggaattgct gacttggaac
1021 gtgaaacatt taagtatcca aactttgatg ttgaatacac tgctgaagac ttagcttcag
1081 ttcctcctat gacatatgat ccatatgaca gggagcttgt accactctta tacttcagtt
1141 gtccatacaa gactactttt gaaattgaaa tcagtagaat gaaggatcaa ggtccagata
1201 aagaaaattc aggggcaatc gaagcctcag tgaagttaac agaactctta gatttgtata
1261 gagaagatag aggtgcaaaa tgggtaacag ctttagaaga aattccaagt ttaataataa
1321 aagggttaag ctatttgcaa ttgaaaaaca caaaacaaga ctcccttggc cagttggtag
1381 actggaccat gcaagcttta aatttacaag tagcgcttcg ccaacctatc gccttaaatg
1441 ttcgacagct caaagctggg accaaattag tgtcctcact agcagaatgt ggggctcaag
1501 gagttacagg actgctacaa gcaggagtga tcagtggatt atttgaactt ctgtttgctg
1561 atcacgtatc atcttctctt aagttaaatg cttttaaagc tttggacagt gtcattagta
1621 tgacagaagg aatggaagct tttttaagag gtaggcagaa tgaaaaaagt ggttatcaaa
1681 agcttctgga actcatactt ttagatcaga ctgtgagggt tgttactgct ggttcagcta
1741 ttctccaaaa atgccatttc tatgaagtct tgtcagagat taaaagactt ggtgaccatt
1801 tagcagagaa gacttcatct cttcctaacc acagtgaacc tgatcacgac acagatgctg
1861 gacttgagag aacaaaccca gaatatgaaa atgaggtgga agcttctatg gatatggatc
1921 ttttggaatc ctcaaatata agtgaagggg aaatagaaag gcttattaac ctcctagaag
1981 aagtttttca tttaatggaa actgcccctc atacaatgat ccaacaacct gttaagtctt
2041 tcccaacgat ggcacgaatt actggacctc cagagaggga tgatccatac cctgttctct
2101 ttagatatct tcacagtcat cacttcttgg agttggttac cttgcttctg tcaattccag
2161 taacaagtgc tcaccctggt gtgctgcaag ccacaaaaga tgttttgaag tttcttgcac
2221 agtcacagaa gggtcttctt ttttttatgt cggaatatga agcaacaaat ttattgatcc
2281 gagctctgtg tcacttttat gatcaagatg aggaggaagg tctccaatct gatggtgtta
2341 ttgatgatgc atttgccttg tggctacagg actcaacaca gacattgcaa tgtattacag
2401 aactgttcag ccattttcag cgttgtacag ccagtgaaga aacagaccat tcagatctct
2461 tgggaaccct gcacaatctt tatttgatta cttttaatcc tgtgggaaga tcagctgttg
2521 gccatgtttt tagtctggag aaaaatctcc aaagtcttat tactctaatg gagtactatt
2581 ccaaagaagc cttgggtgat tccaaatcta agaagtcagt agcttataat tacgcatgca
2641 tacttatttt ggtggtggtt cagtcttcca gtgatgttca aatgctagaa caacatgcag
2701 catctctctt gaagctttgt aaagcagatg aaaataatgc taaattgcaa gaacttggca
2761 agtggcttga acctctgaaa aaccttagat ttgaaattaa ctgcatccca aacttaattg
2821 agtatgttaa gcagaatatc gataacttga tgaccccaga aggagttggc cttaccactg
2881 ccttacgtgt tctctgtaat gttgcatgcc caccacctcc tgttgaaggt caacagaaag
2941 atctgaaatg gaatcttgcc gttattcagc ttttttctgc tgaaggaatg gacacgttta
3001 ttcgagttct gcaaaaattg aacagtattc tgactcagcc ttggaggctc catgtcaaca
3061 tggggactac ccttcacaga gttactacta tttcaatggc tcgctgcaca ctcactcttc
3121 ttaaaactat gttaacggaa ctcctgagag gtggatcctt tgagtttaag gacatgcgtg
3181 ttccttcagc gcttgttact ttacatatgc tcctgtgctc tatccccctc tcaggtcgtt
3241 tggatagtga tgaacagaaa attcagaatg atatcattga tattttactg acttttacac
3301 aaggagttaa tgaaaaactc acaatctcag aagagactct ggccaataat acttggtctt
3361 taatgttaaa agaagttctt tcttcaatct tgaaggttcc tgaaggattt ttttctggac
3421 tcatactcct ttcagagctg ctgcctcttc cattgcccat gcaaacaact caggtatcac
3481 ttccatataa catgcatctt ataaatgact gcagtaacac tttttaaaaa gccagtgatt
3541 ttgttaaaaa acaaaaaccc tcatctccct tc
//