LOCUS BC112263 3054 bp mRNA linear HUM 21-JAN-2006 DEFINITION Homo sapiens polycystic kidney disease 2 (autosomal dominant), mRNA (cDNA clone MGC:138468 IMAGE:8327731), complete cds. ACCESSION BC112263 VERSION BC112263.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3054) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3054) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (19-JAN-2006) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Mike Brownstein, NIMH cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRCB Plate: 4 Row: n Column: 17. FEATURES Location/Qualifiers source 1..3054 /db_xref="H-InvDB:HIT000340392" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:138468 IMAGE:8327731" /tissue_type="Pooled,bladder, uterus, placenta, PCR rescued clones" /clone_lib="NIH_MGC_350" /lab_host="DH10B" /note="Vector: pCR4-TOPO with reversed insert; Clone identification sequence tag: CTCAGCTC" gene 1..3054 /gene="PKD2" /gene_synonym="APKD2" /gene_synonym="PKD4" /db_xref="GeneID:5311" /db_xref="HGNC:HGNC:9009" /db_xref="IMGT/GENE-DB:9009" /db_xref="MIM:173910" CDS 88..2994 /gene="PKD2" /gene_synonym="APKD2" /gene_synonym="PKD4" /codon_start=1 /product="polycystin 2" /protein_id="AAI12264.1" /db_xref="GeneID:5311" /db_xref="HGNC:HGNC:9009" /db_xref="IMGT/GENE-DB:9009" /db_xref="MIM:173910" /translation="MVNSSRVQPQQPGDAKRPPAPRAPDPGRLMAGCAAVGASLAAPG GLCEQRGLEIEMQRIRQAAARDPPAGAAASPSPPLSSCSRQAWSRDNPGFEAEEEEEE VEGEEGGMVVEMDVEWRPGSRRSAASSAVSSVGARSRGLGGYHGAGHPSGRRRRREDQ GPPCPSPVGGGDPLHRHLPLEGQPPRVAWAERLVRGLRGLWGTRLMEESSTNREKYLK SVLRELVTYLLFLIVLCILTYGMMSSNVYYYTRMMSQLFLDTPVSKTEKTNFKTLSSM EDFWKFTEGSLLDGLYWKMQPSNQTEADNRSFIFYENLLLGVPRIRQLRVRNGSCSIP QDLRDEIKECYDVYSVSSEDRAPFGPRNGTAWIYTSEKDLNGSSHWGIIATYSGAGYY LDLSRTREETAAQVASLKKNVWLDRGTRATFIDFSVYNANINLFCVVRLLVEFPATGG VIPSWQFQPLKLIRYVTTFDFFLAACEIIFCFFIFYYVVEEILEIRIHKLHYFRSFWN CLDVVIVVLSVVAIGINIYRTSNVEVLLQFLEDQNTFPNFEHLAYWQIQFNNIAAVTV FFVWIKLFKFINFNRTMSQLSTTMSRCAKDLFGFAIMFFIIFLAYAQLAYLVFGTQVD DFSTFQECIFTQFRIILGDINFAEIEEANRVLGPIYFTTFVFFMFFILLNMFLAIIND TYSEVKSDLAQQKAEMELSDLIRKGYHKALVKLKLKKNTVDDISESLRQGGGKLNFDE LRQDLKGKGHTDAEIEAIFTKYDQDGDQELTEHEHQQMRDDLEKEREDLDLDHSSLPR PMSSRSFPRSLDDSEEDDDEDSGHSSRRRGSISSGVSYEEFQVLVRRVDRMEHSIGSI VSKIDAVIVKLEIMERAKLKRREVLGRLLDGVAEDERLGRDSEIHREQMERLVREELE RWESDDAASQISHGLGTPVGLNGQPRPRSSRPSSSQSTEGMEGAGGNGSSNVHV" BASE COUNT 753 a 724 c 870 g 707 t ORIGIN 1 gcgccgggaa gaaaggaaca tggctcctga ggcgcacagc gccgagcgcg gcgccgcgca 61 cccgcgcgcc ggacgccagt gaccgcgatg gtgaactcca gtcgcgtgca gcctcagcag 121 cccggggacg ccaagcggcc gcccgcgccc cgcgcgccgg acccgggccg gctgatggct 181 ggctgcgcgg ccgtgggcgc cagcctcgcc gccccgggcg gcctctgcga gcagcggggc 241 ctggagatcg agatgcagcg catccggcag gcggccgcgc gggacccccc ggccggagcc 301 gcggcctccc cttctcctcc gctctcgtcg tgctcccggc aggcgtggag ccgcgataac 361 cccggcttcg aggccgagga ggaggaggag gaggtggaag gggaagaagg cggaatggtg 421 gtggagatgg acgtagagtg gcgcccgggc agccggaggt cggccgcctc ctcggccgtg 481 agctccgtgg gcgcgcggag ccgggggctt gggggctacc acggcgcggg ccacccgagc 541 gggaggcggc gccggcgaga ggaccagggc ccgccgtgcc ccagcccagt cggcggcggg 601 gacccgctgc atcgccacct ccccctggaa gggcagccgc cccgagtggc ctgggcggag 661 aggctggttc gcgggctgcg aggtctctgg ggaacaagac tcatggagga aagcagcact 721 aaccgagaga aataccttaa aagtgtttta cgggaactgg tcacatacct cctttttctc 781 atagtcttgt gcatcttgac ctacggcatg atgagctcca atgtgtacta ctacacccgg 841 atgatgtcac agctcttcct agacaccccc gtgtccaaaa cggagaaaac taactttaaa 901 actctgtctt ccatggaaga cttctggaag ttcacagaag gctccttatt ggatgggctg 961 tactggaaga tgcagcccag caaccagact gaagctgaca accgaagttt catcttctat 1021 gagaacctgc tgttaggggt tccacgaata cggcaactcc gagtcagaaa tggatcctgc 1081 tctatccccc aggacttgag agatgaaatt aaagagtgct atgatgtcta ctctgtcagt 1141 agtgaagata gggctccctt tgggccccga aatggaaccg cttggatcta cacaagtgaa 1201 aaagacttga atggtagtag ccactgggga atcattgcaa cttatagtgg agctggctat 1261 tatctggatt tgtcaagaac aagagaggaa acagctgcac aagttgctag cctcaagaaa 1321 aatgtctggc tggaccgagg aaccagggca acttttattg acttctcagt gtacaacgcc 1381 aacattaacc tgttctgtgt ggtcaggtta ttggttgaat tcccagcaac aggtggtgtg 1441 attccatctt ggcaatttca gcctttaaag ctgatccgat atgtcacaac ttttgatttc 1501 ttcctggcag cctgtgagat tatcttttgt ttctttatct tttactatgt ggtggaagag 1561 atattggaaa ttcgcattca caaactacac tatttcagga gtttctggaa ttgtctggat 1621 gttgtgatcg ttgtgctgtc agtggtagct ataggaatta acatatacag aacatcaaat 1681 gtggaggtgc tactacagtt tctggaagat caaaatactt tccccaactt tgagcatctg 1741 gcatattggc agatacagtt caacaatata gctgctgtca cagtattttt tgtctggatt 1801 aagctcttca aattcatcaa ttttaacagg accatgagcc agctctcgac aaccatgtct 1861 cgatgtgcca aagacctgtt tggctttgct attatgttct tcattatttt cctagcgtat 1921 gctcagttgg cataccttgt ctttggcact caggtcgatg acttcagtac tttccaagag 1981 tgtatcttca ctcaattccg tatcattttg ggcgatatca actttgcaga gattgaggaa 2041 gctaatcgag ttttgggacc aatttatttc actacatttg tgttctttat gttcttcatt 2101 cttttgaata tgtttttggc tatcatcaat gatacttact ctgaagtgaa atctgacttg 2161 gcacagcaga aagctgaaat ggaactctca gatcttatca gaaagggcta ccataaagct 2221 ttggtcaaac taaaactgaa aaaaaatacc gtggatgaca tttcagagag tctgcggcaa 2281 ggaggaggca agttaaactt tgacgaactt cgacaagatc tcaaagggaa gggccatact 2341 gatgcagaga ttgaggcaat attcacaaag tacgaccaag atggagacca agaactgacc 2401 gaacatgaac atcagcagat gagagacgac ttggagaaag agagggagga cctggatttg 2461 gatcacagtt ctttaccacg tcccatgagc agccgaagtt tccctcgaag cctggatgac 2521 tctgaggagg atgacgatga agatagcgga catagctcca gaaggagggg aagcatttct 2581 agtggcgttt cttacgaaga gtttcaagtc ctggtgagac gagtggaccg gatggagcat 2641 tccatcggca gcatagtgtc caagattgac gccgtgatcg tgaagctaga gattatggag 2701 cgagccaaac tgaagaggag ggaggtgctg ggaaggctgt tggatggggt ggccgaggat 2761 gaaaggctgg gtcgtgacag tgaaatccat agggaacaga tggaacggct agtacgtgaa 2821 gagttggaac gctgggaatc cgatgatgca gcttcccaga tcagtcatgg tttaggcacg 2881 ccagtgggac taaatggtca acctcgcccc agaagctccc gcccatcttc ctcccaatct 2941 acagaaggca tggaaggtgc aggtggaaat gggagttcta atgtccacgt atgatatgtg 3001 tgtttcagta tgtgtgtttc taataagtga ggaagtggct gtcctgaatt gctg //