LOCUS BC112163 4386 bp mRNA linear HUM 21-JAN-2006 DEFINITION Homo sapiens Cdc42 GTPase-activating protein, mRNA (cDNA clone MGC:138368 IMAGE:8327631), complete cds. ACCESSION BC112163 VERSION BC112163.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4386) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4386) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (19-JAN-2006) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Mike Brownstein, NIMH cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRCB Plate: 4 Row: j Column: 13. FEATURES Location/Qualifiers source 1..4386 /db_xref="H-InvDB:HIT000340292" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:138368 IMAGE:8327631" /tissue_type="Brain, cerebellum, PCR rescued clones" /clone_lib="NIH_MGC_313" /note="Vector: pCR-XL-TOPO with reversed insert; Clone identification sequence tag: CACATTCC" gene 1..4386 /gene="CDGAP" /gene_synonym="KIAA1204" /db_xref="GeneID:57514" CDS 28..4362 /gene="CDGAP" /gene_synonym="KIAA1204" /codon_start=1 /product="Cdc42 GTPase-activating protein" /protein_id="AAI12164.1" /db_xref="GeneID:57514" /translation="MKNKGAKQKLKRKGAASAFGCDLTEYLESSGQDVPYVLKSCAEF IETHGIVDGIYRLSGVTSNIQRLRQEFGSDQCPDLTREVYLQDIHCVGSLCKLYFREL PNPLLTYELYEKFTEAVSHCPEEGQLARIQNVIQELPPSHYRTLEYLIRHLAHIASFS SKTNMHARNLALVWAPNLLRSKEIEATGCNGDAAFLAVRVQQVVIEFILNHVDQIFNN GAPGSLENDENRPIMKSLTLPALSLPMKLVSLEEAQARSLATNHPARKERRENSLPEI VPPMGTLFHTVLELPDNKRKLSSKSKKWKSIFNLGRSGSDSKSKLSRNGSVFVRGQRL SVEKATIRPAKSMDSLCSVPVEGKETKGNFNRTVTTGGFFIPATKMHSTGTGSSCDLT KQEGEWGQEGMPPGAEGGFDVSSDRSHLQGAQARPPPEQLKVFRPVEDPESEQTAPKM LGMFYTSNDSPSKSVFTSSLFQMEPSPRNQRKALNISEPFAVSVPLRVSAVISTNSTP CRTPPKELQSLSSLEEFSFHGSESGGWPEEEKPLGAETSAASVPKKAGLEDAKAVPEA PGTVECSKGLSQEPGAHLEEKKTPESSLSSQHLNELEKRPNPEKVVEEGREAGEMESS TLQESPRARAEAVLLHEMDEDDLANALIWPEIQQELKIIESEEELSSLPPPALKTSPI QPILESSLGPFIPSEPPGSLPCGSFPAPVSTPLEVWTRDPANQSTQGASTAASREKPE PEQGLHPDLASLAPLEIVPFEKASPQATVEVGGPGNLSPPLPPAPPPPTPLEESTPVL LSKGSPEREDSSRKLRTDLYIDQLKSQDSPEISSLCQGEEATPRHSDKQNSKNAASEG KGCGFPSPTREVEIVSQEEEDVTHSVQEPSDCDEDDTVTDIAQHGLEMVEPWEEPQWV TSPLHSPTLKDAHKAQVQGLQGHQLEKRLSHRPSLRQSHSLDSKPTVKSQWTLEVPSS SSCANLETERNSDPLQPQAPRREITGWDEKALRSFREFSGLKGAEAPPNQKGPSGVQP NPAETSPISLAEGKELGTHLGHSSPQIRQGGVPGPESSKESSPSVQDSTSPGEHPAKL QLKSTECGPPKGKNRPSSLNLDPAIPIADLFWFENVASFSSPGMQVSEPGDPKVTWMT SSYCKADPWRVYSQDPQDLDIVAHALTGRRNSAPVSVSAVRTSFMVKMCQARAVPVIP PKIQYTQIPQPLPSQSSGENGVQPLERSQEGPSSTSGTTQKPAKDDSPSSLESSKEEK PKQDPGAIKSSPVDATAPCMCEGPTLSPEPGSSNLLSTQDAVVQCRKRMSETEPSGDN LLSSKLERPSGGSKPFHRSRPGRPQSLILFSPPFPIMDHLPPSSTVTDSKVLLSPIRS PTQTVSPGLLCGELAENTWVTPEGVTLRNKMTIPKNGQRLETSTSCFYQPQRRSVILD GRSGRQIE" BASE COUNT 1139 a 1235 c 1158 g 854 t ORIGIN 1 gaggggcagc ctctttggga ctaactcatg aagaacaagg gtgctaagca gaagctgaaa 61 cgaaagggag ccgccagcgc gtttggctgt gacctgacgg agtatctgga aagctcggga 121 caggatgttc catacgtttt gaagagctgt gcagaattta tagagactca cggcatcgtg 181 gatggaatct atcggctttc aggagtcacc tcaaacatac aacggctaag gcaagagttt 241 ggctcagatc aatgtccaga tctgacaagg gaagtgtacc tccaggacat ccactgtgtg 301 ggctcgcttt gcaagctcta ctttagggag ctgcccaacc ccctcctgac ttatgagctc 361 tatgagaaat tcacggaggc agtgtcgcat tgccctgaag aaggccaact ggcccgaatc 421 caaaatgtta tccaggagct tcctccatcc cactatagga ccttggaata cctgattcga 481 cacctggccc atatcgcctc cttcagcagc aagaccaaca tgcacgcccg gaacctggcc 541 ctggtgtggg cgccaaacct cctcaggtct aaagaaattg aagccactgg ttgcaatgga 601 gatgcagcct tccttgcagt ccgggtccag caggtggtga ttgagttcat attgaatcat 661 gtagatcaaa tctttaacaa cggtgcacct gggtctctgg agaatgatga aaaccggccc 721 atcatgaaga gcctgacctt gccagccctc tccctgccca tgaagctggt gagccttgag 781 gaagctcaag cccgcagcct ggccactaac catcctgctc gcaaggaaag gagggagaac 841 agcctgcctg agattgtccc tcccatgggc accctcttcc acactgtcct tgagttacca 901 gacaacaagc gaaagctctc cagtaaatca aagaagtgga aatcaatatt taacctggga 961 cgttctggat cagactccaa atcaaaactg agtagaaatg ggagtgtatt tgtgagagga 1021 cagaggctct cggtggaaaa ggctactatc cgaccagcta aaagcatgga ctcactatgt 1081 tcagtgcctg tggaaggaaa agaaaccaag ggaaatttca atcgaacagt taccaccggt 1141 ggatttttca ttccagcaac aaagatgcac tccaccggca ccggcagctc atgtgacctc 1201 accaagcagg agggcgaatg gggccaggag gggatgcctc ccggggctga gggtggcttt 1261 gatgtgagca gtgatcgcag ccatctccag ggcgctcagg cccggccccc accggaacag 1321 ctgaaggttt tccggcctgt tgaggatccg gagagcgagc aaacagcccc aaagatgttg 1381 ggtatgttct acacttcgaa cgacagccct agcaaatccg tcttcaccag cagcctcttc 1441 cagatggagc cctcgccgcg taaccagcgc aaggcgctga acatctccga gccctttgcg 1501 gtatctgtgc cgctccgcgt gtccgcagtc atcagcacca acagcacgcc gtgcagaaca 1561 cccccgaagg agctgcagtc tctttccagc ctggaagagt tttcttttca tggatcagag 1621 agcggaggct ggccagaaga agagaaaccg ctgggagctg agacttctgc agcttctgta 1681 cctaagaagg caggtcttga ggatgccaag gcagtacctg aagcaccggg gacagtggaa 1741 tgcagcaaag gcctgtccca ggagccaggc gcccacctgg aggagaagaa aaccccagaa 1801 agctccttga gctctcaaca tttaaatgaa ttagagaaga ggccaaatcc ggagaaggtg 1861 gtggaggagg gacgagaggc tggtgagatg gagtccagca ccctgcagga gagccccagg 1921 gccagagccg aagctgtgct tctccatgag atggatgaag atgatctggc caatgccctg 1981 atctggcctg agattcaaca ggagctgaaa atcattgaat ctgaggagga gctctcatcg 2041 ttgccacctc ctgctctgaa gaccagccca attcagccta ttctcgagtc gagtctgggg 2101 ccctttattc cctcagagcc tcctgggagc ttgccttgtg gctccttccc tgctccagtc 2161 tccacccctc tggaggtgtg gactagggat ccagccaatc agagcacaca gggggcttcc 2221 acagcagcca gcagagagaa gccggaacct gagcagggcc tgcacccaga cctcgccagc 2281 ctggctcctc tggaaatagt tccttttgag aaggcatctc cacaagcaac agtggaagta 2341 ggaggcccag gcaatctgtc tcctccactc ccacctgctc ctccccctcc aactcctctg 2401 gaggagtcaa ctccagtcct gctttcaaag ggcagcccgg aaagagaaga ctcatccagg 2461 aaattgagga cagatctcta catagaccag ctgaagtccc aagacagccc tgagatctct 2521 agcctctgtc agggagagga ggcaacccca agacacagtg acaagcaaaa ttcaaagaat 2581 gctgcttctg aggggaaagg ctgtggtttt ccaagcccaa ccagggaggt tgagatcgtc 2641 tcacaagaag aggaggatgt aacccattca gtacaggagc cttcagactg tgacgaagat 2701 gacactgtga cagacattgc ccagcatggc ctggagatgg tggagccctg ggaggaaccc 2761 cagtgggtga cgagtcccct tcactctccc accctgaaag acgcgcacaa ggcccaggta 2821 cagggccttc agggtcacca gttggagaag aggctttccc acaggcccag ccttcgccag 2881 agccattctc tagatagcaa acccacggtt aaaagccagt ggactctcga ggttccctcc 2941 tccagcagct gtgctaatct tgaaacagag aggaattctg accctcttca gccccaggca 3001 cccaggagag agattactgg atgggatgag aaagccctga ggtccttcag agagttctct 3061 ggcctgaaag gggcagaggc tcctcccaac cagaagggac caagtggtgt gcaacccaac 3121 ccagcagaaa ccagccccat cagcctagca gagggaaagg agctagggac acacctgggg 3181 cacagcagtc cacagattag gcaaggtggt gttcctgggc cagagagcag caaggagagt 3241 tcacccagcg tgcaggacag cacttcgcct ggagagcacc ccgcaaagtt acagctaaag 3301 agcacagagt gtgggccccc aaaagggaaa aacaggcctt cttccctcaa cttggaccct 3361 gccattccca ttgctgacct cttctggttt gagaatgtgg cctcatttag ttcacctgga 3421 atgcaggtct ctgagccagg agacccaaag gtcacatgga tgacctcatc ttactgtaaa 3481 gcagacccct ggagggttta ctcccaggac ccccaggacc tggacattgt tgctcatgca 3541 ctgacaggcc gccgtaactc agctcctgtg agtgtgtcag ctgtgagaac ctccttcatg 3601 gtcaaaatgt gccaggccag ggcggtccca gtcatccctc ccaagattca gtacacccag 3661 atcccacagc ccctgccctc tcagagctca ggggagaatg gggttcagcc tctggagagg 3721 agccaggagg gacccagctc aaccagtggg accactcaga aacctgccaa agatgattct 3781 ccctcctccc tggaaagctc aaaggaagaa aaaccaaagc aagatcccgg agccattaag 3841 tcctcaccag tggatgccac tgcaccctgc atgtgcgagg gacctaccct ttctccagaa 3901 ccaggctcgt ctaacctgct ctccacccag gatgcagtag tgcaatgcag aaagcgcatg 3961 tcagagacag agccatctgg ggacaacctt ctttcttcaa aactagagcg accatctggg 4021 ggttctaagc ctttccacag gtcaaggcca ggaagacctc agagcctaat cttattcagt 4081 cctcctttcc ccattatgga ccacctgccc ccttcatcca cagtgacaga ttccaaggtc 4141 ctgctgtccc ctatcagaag tcccacccag acagtttccc ctggccttct ttgtggagag 4201 ttggcagaaa acacatgggt cacaccagaa ggggttacac ttaggaataa aatgaccatc 4261 cctaagaatg gccagagact agagacctca accagctgtt tttaccagcc tcagcggaga 4321 tcagtaattc tggatggaag aagtgggagg caaatagaat gatttcggtt cacctgctgg 4381 tgtctg //