LOCUS BC112107 1952 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens tetratricopeptide repeat domain 19, mRNA (cDNA clone
MGC:138312 IMAGE:8327575), complete cds.
ACCESSION BC112107
VERSION BC112107.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1952)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1952)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-JAN-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 4 Row: h Column: 5.
FEATURES Location/Qualifiers
source 1..1952
/db_xref="H-InvDB:HIT000340236"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:138312 IMAGE:8327575"
/tissue_type="Brain, cerebral cortex, PCR rescued clones"
/clone_lib="NIH_MGC_287"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: TAACCAAT"
gene 1..1952
/gene="TTC19"
/gene_synonym="2010204O13Rik"
/gene_synonym="FLJ20343"
/gene_synonym="MGC19520"
/db_xref="GeneID:54902"
/db_xref="HGNC:HGNC:26006"
CDS 107..1612
/gene="TTC19"
/gene_synonym="2010204O13Rik"
/gene_synonym="FLJ20343"
/gene_synonym="MGC19520"
/codon_start=1
/product="tetratricopeptide repeat domain 19"
/protein_id="AAI12108.1"
/db_xref="GeneID:54902"
/db_xref="HGNC:HGNC:26006"
/translation="MAQPHTTSVPYFARSPAPPPPSRSGAPPQPPATLRPSRRRTRPP
RPADRRDAPADCAYLWRILTPRRGRARRSDVGARHRACGRRDVLLSRQGPANPEGARR
VVGGQERVWPAVRRGRGGSMFRLLSWSLGRGFLRAAGRRCRGCSARLLPGLAGGPGPE
VQVPPSRVAPHGRGPGLLPLLAALAWFSRPAAAEEEEQQGADGAAAEDGADEAEAEII
QLLKRAKLSIMKDEPEEAELILHDALRLAYQTDNKKAITYTYDLMANLAFIRGQLENA
EQLFKATMSYLLGGGMKQEDNAIIEISLKLASIYAAQNRQEFAVAGYEFCISTLEEKI
EREKELAEDIMSVEEKANTHLLLGMCLDACARYLLFSKQPSQAQRMYEKALQISEEIQ
GERHPQTIVLMSDLATTLDAQGRFDEAYIYMQRASDLARQINHPELHMVLSNLAAVLM
HRERYTQAKEIYQEALKQAKLKKDEISVQHIREELAELSKKSRPLTNSVKL"
BASE COUNT 465 a 516 c 567 g 404 t
ORIGIN
1 cgaacaagag gtttagagaa ccacatggaa aaaaggcagg gccaggcccg gacaccccgc
61 ctcctgcctc ccggcccggc ggtgcccgga tgccccgccc gcgcccatgg cgcagccaca
121 cacgacctcg gtcccgtact tcgcgcgctc tcctgcaccg ccgccgccat ctcgctcagg
181 agctcctcca caaccgccgg caacactacg gccatcgcgc cgcaggacac gccctccacg
241 accggcggac cgccgcgacg ctccagctga ctgcgcctac ctgtggagga tcctgacccc
301 ccgccggggc agggcgagac ggagtgacgt cggggcgcgt catcgcgcgt gcggacgcag
361 ggatgtcctg ctcagtcgtc agggcccggc caatccggag ggcgctcggc gcgtggtcgg
421 gggccaggag cgcgtctggc ctgcagtgcg cagaggacgc ggcgggagca tgttccggct
481 cctgagctgg agcctgggcc gaggcttcct gcgggccgcg gggcggcggt gccggggctg
541 ctccgcgcgc ctgctcccgg ggctggcagg aggtccgggg cccgaggtgc aggtgccgcc
601 atcccgagtc gcgccgcacg gccggggccc aggcctgctg ccgctgctgg cagcgctcgc
661 ctggttctcg aggcccgctg cggcagagga ggaggagcag cagggagccg acggggccgc
721 tgccgaggac ggggcggacg aggccgaggc agagatcatc cagctgctga agcgagccaa
781 gttgagcatt atgaaagatg agccagaaga ggctgagtta attttgcatg acgctcttcg
841 tctcgcctat cagactgata acaagaaggc catcacttac acttatgatt tgatggccaa
901 cttagcattt atacggggtc agcttgaaaa tgctgaacaa ctttttaaag caacaatgag
961 ttacctcctt ggagggggca tgaagcagga ggacaatgca ataattgaaa tttccctaaa
1021 gctggccagt atctatgctg cgcagaacag acaggaattt gctgttgctg gctatgaatt
1081 ctgcatttca actctagagg aaaaaattga aagagaaaag gaattagcag aagacattat
1141 gtcagtggaa gagaaagcca atacccacct cctcttgggc atgtgcttag acgcctgtgc
1201 tcgctacctt ctgttctcca agcagccgtc acaggcacaa aggatgtatg aaaaagctct
1261 gcagatttct gaagaaatac aaggagaaag acacccacag accattgtgc tgatgagtga
1321 cctggctact accctggatg cacagggccg ctttgatgag gcctatattt atatgcaaag
1381 ggcatcagat ctggcaagac agataaatca tcctgagcta cacatggtac tcagtaatct
1441 agctgcagtt ttgatgcaca gagaacgata tacacaagca aaagagatct accaggaagc
1501 actgaagcaa gcaaagctga aaaaagatga aatttctgta caacacatca gggaagagtt
1561 ggctgagctg tcaaagaaaa gtagaccttt gacaaattct gtcaagctct aaatccattt
1621 ttgtgtaggg agaataatgt ctagtaatgt ggaagaatag ctatcattcc tgtctctgtg
1681 gcacccgatc aatggcttaa atctgtcgtt tttgatattc aggtttcctc aatttagcct
1741 tagtgaagga ggggttgtac acactgccat ttttgtattt taaaggaaaa atgactttca
1801 ttcccaactg attatgacct ttcaggatgt cgtcaagtga tgctttcagt tgtaacacgt
1861 gacttggtgc tgtccctgct ggtctaagta gaactgtaga ttcatatggg ctggtgttcc
1921 tgtgcgctgt gggtgtggtg attcagcctg gc
//