LOCUS BC112072 573 bp mRNA linear HUM 13-SEP-2007
DEFINITION Homo sapiens histone cluster 1, H2al, mRNA (cDNA clone MGC:138277
IMAGE:8327540), complete cds.
ACCESSION BC112072
VERSION BC112072.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 573)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 573)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-JAN-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 4 Row: f Column: 18.
FEATURES Location/Qualifiers
source 1..573
/db_xref="H-InvDB:HIT000340201"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:138277 IMAGE:8327540"
/tissue_type="Pooled, cerebellum, kidney, placenta,
testis, lung, colon, liver, heart, thyroid, bladder,
uterus, PCR rescued clones"
/clone_lib="NIH_MGC_361"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: GCCGTTCT"
gene 1..573
/gene="HIST1H2AL"
/gene_synonym="dJ193B12.9"
/gene_synonym="H2A.i"
/gene_synonym="H2A/i"
/gene_synonym="HIST1H2AM"
/db_xref="GeneID:8332"
/db_xref="HGNC:HGNC:4730"
/db_xref="MIM:602793"
CDS 100..492
/gene="HIST1H2AL"
/gene_synonym="dJ193B12.9"
/gene_synonym="H2A.i"
/gene_synonym="H2A/i"
/gene_synonym="HIST1H2AM"
/codon_start=1
/product="HIST1H2AL protein"
/protein_id="AAI12073.1"
/db_xref="GeneID:8332"
/db_xref="HGNC:HGNC:4730"
/db_xref="MIM:602793"
/translation="MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERV
GAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVT
IAQGGVLPNIQAVLLPKKTESHHKAKGK"
BASE COUNT 121 a 177 c 159 g 116 t
ORIGIN
1 cacagcttta ttttcgcgcc cagtattgac tataagtagt ggagctctgg tgaacttctc
61 tcggctgttc tcagttcctc catttatcgt ttcttcgtca tgtcgggacg cggcaagcag
121 ggaggcaaag ctcgcgccaa agccaagacc cgctcttctc gtgccggtct ccagttcccc
181 gtgggccgag tgcaccgact gctccgcaag ggcaactatg ctgagcgggt cggggccggc
241 gcgccggtgt acctggcggc ggtgctggag tacctgactg ccgagatcct ggagctggcg
301 ggcaacgccg cccgcgacaa caagaagacc cgcattatcc cgcgccactt gcagctggcc
361 atccgcaacg acgaggagct caacaagctg ctgggcaaag taaccatcgc tcagggtggt
421 gtcctgccca acatccaggc tgtgctactg cccaagaaga ccgagagtca ccacaaggcc
481 aaaggcaaat aatgtctcca tagaatcact ttccaataca acggctcttt tcagagccac
541 ctactatttc tgcgggagag ctgggccact ggt
//