LOCUS BC112042 1945 bp mRNA linear HUM 21-JAN-2006
DEFINITION Homo sapiens WD repeats and SOF1 domain containing, mRNA (cDNA
clone MGC:138247 IMAGE:8327510), complete cds.
ACCESSION BC112042
VERSION BC112042.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1945)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1945)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-JAN-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 4 Row: e Column: 12.
FEATURES Location/Qualifiers
source 1..1945
/db_xref="H-InvDB:HIT000340171"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:138247 IMAGE:8327510"
/tissue_type="Brain, cerebellum, PCR rescued clones"
/clone_lib="NIH_MGC_311"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: AATTGCTC"
gene 1..1945
/gene="WDSOF1"
/gene_synonym="DKFZP564O0463"
/gene_synonym="Gm83"
/gene_synonym="HSPC064"
/db_xref="GeneID:25879"
/db_xref="HGNC:HGNC:24535"
/db_xref="IMGT/GENE-DB:24535"
/db_xref="MIM:24535"
CDS 68..1861
/gene="WDSOF1"
/gene_synonym="DKFZP564O0463"
/gene_synonym="Gm83"
/gene_synonym="HSPC064"
/codon_start=1
/product="WD repeats and SOF1 domain containing"
/protein_id="AAI12043.1"
/db_xref="GeneID:25879"
/db_xref="HGNC:HGNC:24535"
/db_xref="IMGT/GENE-DB:24535"
/db_xref="MIM:24535"
/translation="MQWPPPWRRSPLVSATPPPGPTRGLLCPRRVSEAGDSSTEGART
GHSHYVTPAESAMEGRSQPLPSLRPASPTNAPAHGRGSDCTAKEPPLANVCRQNYGAA
QDPVEPAGRRSASHVTGSSLGKAEVACGRRWRWAELLADTSWSPAGRATEMKVKMLSR
NPDNYVRETKLDLQRVPRNYDPALHPFEVPREYVRALNATKLERVFAKPFLASLDGHR
DGVNCLAKHPEKLATVLSGACDGEVRIWNLTQRNCIRTIQAHEGFVRGICTRFCGTSF
FTVGDDKTVKQWKMDGPGYGDEEEPLHTILGKTVYTGIDHHWKEAVFATCGQQVDIWD
EQRTNPICSMTWGFDSISSVKFNPIETFLLGSCASDRNIVLYDMRQATPLKKVILDMR
TNTICWNPMEAFIFTAANEDYNLYTFDMRALDTPVMVHMDHVSAVLDVDYSPTGKEFV
SASFDKSIRIFPVDKSRSREVYHTKRMQHVICVKWTSDSKYIMCGSDEMNIRLWKANA
SEKLGVLTSREKAAKDYNQKLKEKFQHYPHIKRIARHRHLPKSIYSQIQEQRIMKEAR
RRKEVNRIKHSKPGSVPLVSEKKKHVVAVVK"
BASE COUNT 559 a 417 c 507 g 462 t
ORIGIN
1 ccctggcccg tcataggctc ggggcccgtc gacaccacgg cgcccagggc cgcggaggtg
61 ggacgcgatg cagtggccgc caccgtggcg acggtcgccc cttgtgagcg caaccccacc
121 tccgggacca acgagaggac tcttatgccc aaggcgcgtg agcgaagccg gagactctag
181 tactgagggg gcaagaacgg ggcacagcca ctacgtcacg ccggcggaaa gcgcgatgga
241 ggggaggtcc cagcctctcc cgagtctccg ccctgcctcg cccacaaatg ctccagccca
301 cggacgcgga agcgactgca cagctaaaga accgcccctt gctaacgttt gccggcaaaa
361 ctacggagcg gcgcaggatc cagttgagcc agcaggccgc cgctccgcga gtcacgtgac
421 tggaagcagt ctgggaaaag cggaagtcgc ctgtgggagg aggtggcggt gggcggaact
481 cctagcggac acctcgtgga gtccggccgg aagagcaacc gagatgaagg tgaagatgct
541 gagccggaat ccggacaatt atgtccgcga aaccaagttg gacttacaga gagttccaag
601 aaactatgat cctgctttac atccttttga ggtcccacga gaatatgtaa gagctttaaa
661 tgctaccaaa ctggaacgag tatttgcaaa accattcctt gcttcgctgg atggtcaccg
721 tgatggagtc aactgcttgg caaagcatcc agagaagctg gctactgtcc tttctggggc
781 gtgtgatgga gaggttagaa tttggaatct aactcagcgg aattgtatcc gtacaataca
841 agcacatgaa ggctttgtac gaggaatatg tactcgcttt tgtgggactt cttttttcac
901 tgttggtgat gacaaaactg tgaagcagtg gaaaatggat gggccaggct atggagacga
961 ggaagagcca ttacatacaa tattaggaaa gacagtgtat actgggattg atcatcactg
1021 gaaagaagct gtttttgcca catgtggaca gcaagtagac atttgggatg aacaaagaac
1081 taatcctata tgttcaatga cctggggatt tgacagtata agtagtgtta aatttaaccc
1141 aattgagaca tttctcttgg gaagttgtgc atctgacagg aatatagtac tgtacgatat
1201 gaggcaagct actcctttga aaaaggttat cttagatatg agaacaaata caatctgttg
1261 gaaccctatg gaagctttca tttttacagc agcaaatgaa gattataact tatatacttt
1321 tgatatgcgt gcactggaca ctcctgtaat ggtccatatg gatcatgtat ctgcagtgct
1381 tgatgtggat tactctccca ctgggaagga gtttgtgtct gctagtttcg ataaatctat
1441 tcgaatcttt cctgtagaca aaagtcgaag cagggaggta tatcatacaa agagaatgca
1501 acatgttatc tgtgtaaaat ggacttctga cagcaagtat attatgtgtg gatctgatga
1561 aatgaacatt cgcctgtgga aagctaatgc ttctgaaaaa ttgggtgtgc ttacatcacg
1621 agaaaaagca gccaaggatt ataaccagaa attgaaggag aaatttcagc attatcctca
1681 tataaaacgt atagctcgtc atcgacatct accaaaatct atctatagcc agattcagga
1741 acagcgcatc atgaaagaag ctcgtcgacg aaaggaagtg aatcgtatta aacacagcaa
1801 gcctggatct gtgccacttg tgtcagagaa gaagaaacac gtagtggcag ttgtaaaata
1861 attggtattc ctaacaatcc tgatgtataa ttatttgtta cttttgattt gagaactcta
1921 caaataaaag tgctgggact agatt
//