LOCUS BC111991 1794 bp mRNA linear HUM 21-JAN-2006
DEFINITION Homo sapiens potassium voltage-gated channel, Shaw-related
subfamily, member 2, transcript variant 3, mRNA (cDNA clone
MGC:138196 IMAGE:8327459), complete cds.
ACCESSION BC111991
VERSION BC111991.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1794)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1794)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-JAN-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 4 Row: c Column: 9.
FEATURES Location/Qualifiers
source 1..1794
/db_xref="H-InvDB:HIT000340120"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:138196 IMAGE:8327459"
/tissue_type="Brain, cerebral cortex, PCR rescued clones"
/clone_lib="NIH_MGC_286"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: ATGAGAAC"
gene 1..1794
/gene="KCNC2"
/gene_synonym="KV3.2"
/db_xref="GeneID:3747"
/db_xref="HGNC:HGNC:6234"
/db_xref="IMGT/GENE-DB:6234"
/db_xref="MIM:176256"
CDS 96..1772
/gene="KCNC2"
/gene_synonym="KV3.2"
/codon_start=1
/product="Shaw-related voltage-gated potassium channel
protein 2, isoform KV3.2c"
/protein_id="AAI11992.1"
/db_xref="GeneID:3747"
/db_xref="HGNC:HGNC:6234"
/db_xref="IMGT/GENE-DB:6234"
/db_xref="MIM:176256"
/translation="MGKIENNERVILNVGGTRHETYRSTLKTLPGTRLALLASSEPPG
DCLTTAGDKLQPSPPPLSPPPRAPPLSPGPGGCFEGGAGNCSSRGGRASDHPGGGREF
FFDRHPGVFAYVLNYYRTGKLHCPADVCGPLFEEELAFWGIDETDVEPCCWMTYRQHR
DAEEALDIFETPDLIGGDPGDDEDLAAKRLGIEDAAGLGGPDGKSGRWRRLQPRMWAL
FEDPYSSRAARFIAFASLFFILVSITTFCLETHEAFNIVKNKTEPVINGTSVVLQYEI
ETDPALTYVEGVCVVWFTFEFLVRIVFSPNKLEFIKNLLNIIDFVAILPFYLEVGLSG
LSSKAAKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALG
VLIFATMIYYAERVGAQPNDPSASEHTQFKNIPIGFWWAVVTMTTLGYGDMYPQTWSG
MLVGALCALAGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPRKRKKHIPPAPQASSPTF
CKTELNMACNSTQSDTCLGKDNRLLEHNRSDNCKEVVITGYTQAEARSLT"
BASE COUNT 407 a 496 c 476 g 415 t
ORIGIN
1 actcagtccc gctgcccaga gaacctcgtc cactcggaaa ccaaagcaga accacttttc
61 tctcggtctc gttaagtcat gtctgagtca cagagatggg caagatcgag aacaacgaga
121 gggtgatcct caatgtcggg ggcacccggc acgaaaccta ccgcagcacc ctcaagaccc
181 tgcctggaac acgcctggcc cttcttgcct cctccgagcc cccaggcgac tgcttgacca
241 cggcgggcga caagctgcag ccgtcgccgc ctccactgtc gccgccgccg agagcgcccc
301 cgctgtcccc cgggccaggc ggctgcttcg agggcggcgc gggcaactgc agttcccgcg
361 gcggcagggc cagcgaccat cccggtggcg gccgcgagtt cttcttcgac cggcacccgg
421 gcgtcttcgc ctatgtgctc aattactacc gcaccggcaa gctgcactgc cccgcagacg
481 tgtgcgggcc gctcttcgag gaggagctgg ccttctgggg catcgacgag accgacgtgg
541 agccctgctg ctggatgacc taccggcagc accgcgacgc cgaggaggcg ctggacatct
601 tcgagacccc cgacctcatt ggcggcgacc ccggcgacga cgaggacctg gcggccaaga
661 ggctgggcat cgaggacgcg gcggggctcg ggggccccga cggcaaatct ggccgctgga
721 ggaggctgca gccccgcatg tgggccctct tcgaagaccc ctactcgtcc agagccgcca
781 ggtttattgc ttttgcttct ttattcttca tcctggtttc aattacaact ttttgcctgg
841 aaacacatga agctttcaat attgttaaaa acaagacaga accagtcatc aatggcacaa
901 gtgttgttct acagtatgaa attgaaacgg atcctgcctt gacgtatgta gaaggagtgt
961 gtgtggtgtg gtttactttt gaatttttag tccgtattgt tttttcaccc aataaacttg
1021 aattcatcaa aaatctcttg aatatcattg actttgtggc catcctacct ttctacttag
1081 aggtgggact cagtgggctg tcatccaaag ctgctaaaga tgtgcttggc ttcctcaggg
1141 tggtaaggtt tgtgaggatc ctgagaattt tcaagctcac ccgccatttt gtaggtctga
1201 gggtgcttgg acatactctt cgagctagta ctaatgaatt tttgctgctg ataattttcc
1261 tggctctagg agttttgata tttgctacca tgatctacta tgccgagaga gtgggagctc
1321 aacctaacga cccttcagct agtgagcaca cacagttcaa aaacattccc attgggttct
1381 ggtgggctgt agtgaccatg actaccctgg gttatgggga tatgtacccc caaacatggt
1441 caggcatgct ggtgggagcc ctgtgtgctc tggctggagt gctgacaata gccatgccag
1501 tgcctgtcat tgtcaataat tttggaatgt actactcctt ggcaatggca aagcagaaac
1561 ttccaaggaa aagaaagaag cacatccctc ctgctcctca ggcaagctca cctacttttt
1621 gcaagacaga attaaatatg gcctgcaata gtacacagag tgacacatgt ctgggcaaag
1681 acaatcgact tctggaacat aacagatcag ataactgcaa agaggttgtc attactggtt
1741 acacgcaagc cgaggccaga tctcttactt aatgacttgg ggaaggcaca aaac
//