LOCUS BC111961 1230 bp mRNA linear HUM 09-JUN-2008 DEFINITION Homo sapiens tripartite motif family-like 2, mRNA (cDNA clone MGC:138166 IMAGE:8327429), complete cds. ACCESSION BC111961 VERSION BC111961.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1230) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1230) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (19-JAN-2006) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Mike Brownstein, NIMH cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRCB Plate: 4 Row: b Column: 3. FEATURES Location/Qualifiers source 1..1230 /db_xref="H-InvDB:HIT000340090" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:138166 IMAGE:8327429" /tissue_type="Brain, cerebral cortex and lung, PCR rescued clones" /clone_lib="NIH_MGC_323" /note="Vector: pCR4-TOPO with reversed insert; Clone identification sequence tag: AAGCGCTG" gene 1..1230 /gene="TRIML2" /gene_synonym="SPRYD6" /db_xref="GeneID:205860" /db_xref="HGNC:HGNC:26378" CDS 31..1194 /gene="TRIML2" /gene_synonym="SPRYD6" /codon_start=1 /product="tripartite motif family-like 2" /protein_id="AAI11962.1" /db_xref="GeneID:205860" /db_xref="HGNC:HGNC:26378" /translation="MVCGIQEAAENYRKLFQEILNTSREKLEAAKSILTDEQERMAMI QEEEQNFKKMIESEYSMRLRLLNEECEQNLQRQQECISDLNLRETLLNQAIKLATELE EMFQEMLQRLGRVGRENMEKLKESEARASEQVRSLLKLIVELEKKCGEGTLALLKNAK YSLERSKSLLLEHLEPAHITDLSLCHIRGLSSMFRVLQRHLTLDPETAHPCLALSEDL RTMRLRHGQQDGAGNPERLDFSAMVLAAESFTSGRHYWEVDVEKATRWQVGIYHGSAD AKGSTARASGEKVLLTGSVMGTEWTLWVFPPLKRLFLEKKLDTVGVFLDCEHGQISFY NVTEMSLIYNFSHCAFQGALRPVFSLCIPNGDTSPDSLTILQHGPSCDATVSP" BASE COUNT 353 a 273 c 334 g 270 t ORIGIN 1 tgcttccagt cccaggagca caaacatcac atggtgtgtg ggatacaaga ggctgctgag 61 aattacagga agttattcca ggaaatattg aacacatcga gggagaaact tgaagcagct 121 aaaagcatat tgactgatga gcaagaaaga atggcgatga ttcaggaaga ggaacaaaat 181 tttaaaaaga tgattgagtc tgagtatagt atgagactcc ggttgttgaa tgaagagtgt 241 gagcagaatc tccagagaca gcaggaatgc atatctgact tgaacctgag agaaaccctt 301 ctgaatcaag cgatcaagct tgccaccgag ctagaggaga tgttccagga aatgctacag 361 agactgggcc gtgtggggag agagaacatg gagaaactga aggagagtga agccagggct 421 tctgaacagg tccgcagcct cctaaagctc atcgtggagc ttgagaaaaa gtgtggggaa 481 ggcaccttgg cattgctcaa gaatgcaaaa tactctttag aaaggagcaa gtcactgctg 541 cttgagcatc tggagcccgc tcatatcaca gacctgagtt tatgccacat aagaggactc 601 agcagcatgt tcagagtact ccagagacat ttaacattgg atcctgaaac agctcatccc 661 tgcctggcac tatctgagga cctgagaact atgagattga gacatgggca gcaggatggg 721 gctggcaacc cagaaagatt ggatttcagt gccatggtgc tggctgcgga gagcttcacc 781 tcagggaggc actactggga ggtggacgtg gaaaaggcaa ccaggtggca agtgggcata 841 taccacggct ctgcagacgc gaagggcagc acggccagag cttccggaga gaaagtcttg 901 ctcacggggt cggtgatggg gaccgagtgg actctctggg tcttcccccc tctgaaaagg 961 ctcttcctgg aaaagaagtt ggacacagtt ggggttttcc ttgactgcga acacgggcag 1021 atatcattct acaatgtgac tgagatgtcc ctcatttaca atttctccca ttgcgccttc 1081 caaggagctc tcaggcctgt gttttccctc tgtatcccaa atggagacac aagtccagac 1141 tccctcacca tcttacaaca tggtccttct tgtgatgcta ctgttagccc ttaatcttct 1201 gtgtgtaaaa tccaagacca cgagacacca //