LOCUS BC111955 824 bp mRNA linear HUM 18-MAR-2009 DEFINITION Homo sapiens small nuclear ribonucleoprotein 35kDa (U11/U12), mRNA (cDNA clone MGC:138160 IMAGE:8327423), complete cds. ACCESSION BC111955 VERSION BC111955.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 824) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 824) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (19-JAN-2006) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Mike Brownstein, NIMH cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRCB Plate: 4 Row: a Column: 21. FEATURES Location/Qualifiers source 1..824 /db_xref="H-InvDB:HIT000340084" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:138160 IMAGE:8327423" /tissue_type="Brain, cerebral cortex, PCR rescued clones" /clone_lib="NIH_MGC_287" /note="Vector: pCR4-TOPO with reversed insert; Clone identification sequence tag: CCCACATC" gene 1..824 /gene="SNRNP35" /gene_synonym="HM-1" /gene_synonym="U1SNRNPBP" /db_xref="GeneID:11066" /db_xref="HGNC:HGNC:30852" CDS 51..806 /gene="SNRNP35" /gene_synonym="HM-1" /gene_synonym="U1SNRNPBP" /codon_start=1 /product="small nuclear ribonucleoprotein 35kDa (U11/U12)" /protein_id="AAI11956.1" /db_xref="GeneID:11066" /db_xref="HGNC:HGNC:30852" /translation="MKPANMNDWMPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLARY VPNKGVIGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFI EYKEERAVIKAYRDADGLVIDQHEIFVDYELERTLKGWIPRRLGGGLGGKKESGQLRF GGRDRPFRKPINLPVVKNDLYREGKRERRERSRSRERHWDSRTRDRDHDRGREKRWQE REPTRVWPDNDWERERDFRDDRIKGREKKERGK" BASE COUNT 244 a 178 c 260 g 142 t ORIGIN 1 acctaatgct gccggggagg aagtgcacct agaaagatta atgagaaaca atgaaaccag 61 ctaacatgaa cgattggatg cccatcgcca aggagtatga tccactcaaa gcgggcagca 121 ttgatggcac cgatgaagac ccacacgacc gcgcggtctg gagggcaatg ctggcacgat 181 atgtccccaa caaaggtgtc ataggagatc ccctcctcac cctgtttgtg gccagactaa 241 acttgcagac caaggaggac aaattaaagg aagtcttttc ccgctatggt gacatccggc 301 ggcttcggct ggtcagggac ttggtcacag gtttttcaaa gggctacgcc ttcatcgaat 361 acaaggagga gcgtgccgtg atcaaagctt accgagatgc tgatggcctg gttattgacc 421 agcatgagat atttgtggac tacgagctgg aaaggactct caaagggtgg atccctcggc 481 gacttggagg cggtcttggg ggaaaaaagg agtctgggca actgagattt gggggacggg 541 accggccttt tcgaaaacct attaacttgc cagttgttaa aaacgacctc tatagagagg 601 gaaaacggga aaggcgggag cgatctcgat cccgagaaag acactgggac tcgaggacaa 661 gggatcgaga ccatgacagg ggccgggaga agagatggca agaaagagag ccgaccaggg 721 tgtggcccga caatgactgg gagagagaga gggacttcag agatgacagg atcaagggga 781 gggagaagaa ggaaagaggc aagtagaggc ccaacagcag aacc //