LOCUS BC111949 1734 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens melanoma antigen family E, 2, mRNA (cDNA clone
MGC:138154 IMAGE:8327417), complete cds.
ACCESSION BC111949
VERSION BC111949.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1734)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1734)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-JAN-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 4 Row: a Column: 15.
FEATURES Location/Qualifiers
source 1..1734
/db_xref="H-InvDB:HIT000340078"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:138154 IMAGE:8327417"
/tissue_type="Brain, cerebral cortex, PCR rescued clones"
/clone_lib="NIH_MGC_287"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: GGGGCACC"
gene 1..1734
/gene="MAGEE2"
/gene_synonym="HCA3"
/db_xref="GeneID:139599"
/db_xref="HGNC:HGNC:24935"
CDS 95..1666
/gene="MAGEE2"
/gene_synonym="HCA3"
/codon_start=1
/product="melanoma antigen family E, 2"
/protein_id="AAI11950.1"
/db_xref="GeneID:139599"
/db_xref="HGNC:HGNC:24935"
/translation="MSLVSQNARHCSAEITADYGDGRGEIQATNASGSPTSMLVVDAP
QCPQAPINSQCVNTSQAVQDPNDLEVLIDEQSRRLGALRVHDPLEDRSIALVNFMRMK
SQTEGSIQQSEMLEFLREYSDQFPEILRRASAHLDQVFGLNLRVIDPQADTYNLVSKR
GFQITDRIAESLDMPKASLLALVLGHILLNGNRAREASIWDLLLKVDMWDKPQRINNL
FGNTRNLLTTDFVCMRFLEYWPVYGTNPLEFEFLWGSRAHREITKMEALKFVSDAHDE
EPWSWPEEYNKALEGDKTKERSLTAGLEFWSEDTMNDKANDLVQLAISVTEEMLPIHQ
DELLAHTGKEFEDVFPNILNRATLILDMFYGLSLIEVDTSEHIYLLVQQPESEEEQVM
LESLGRPTQEYVMPILGLIFLMGNRVKEANVWNLLRRFSVDVGRKHSITRKLMRQRYL
ECRPLSYSNPVEYELLWGPRAHHETIKMKVLEYMARLYRKRPQNWPEQYREAVEDEEA
RAKSEATIMFFLDPT"
BASE COUNT 458 a 419 c 448 g 409 t
ORIGIN
1 gggcttcagc tttgtgccga ggcaccaaca ctgctgcggt cctctctccg actgatcgct
61 gatctcaccg ttcccgctcc tgtctcctgg aaccatgtct ctggtaagcc agaatgcacg
121 ccactgtagc gcagagatca ctgcagatta cggcgacggc agaggtgaaa tacaagctac
181 taacgcctcc gggtccccca cctccatgct agtcgttgat gccccccagt gccctcaggc
241 gccaatcaac tctcagtgtg tcaacacttc ccaggccgtt caggacccga atgacctgga
301 ggtcctgatc gacgagcagt ccagacgttt gggggcgctc agggtccatg accctctaga
361 agacaggtcg attgctttgg tgaatttcat gagaatgaaa agccagacgg aggggtctat
421 ccagcagtcc gagatgctgg agtttctcag agagtactca gatcagttcc ctgagatcct
481 cagacgagcc tcagctcacc tggaccaggt ctttgggttg aacctgagag ttattgatcc
541 tcaggctgac acctacaatt tagtcagcaa acggggtttc cagatcaccg ataggatagc
601 ggagtccctg gacatgccaa aagcaagtct cctggcccta gtcctaggcc acatcctctt
661 gaatgggaac cgagcaagag aggcctccat ttgggacttg ctgctaaaag ttgatatgtg
721 ggataagcct cagaggatca acaacctctt tgggaacaca aggaacctcc tcactactga
781 ctttgtgtgc atgcgattct tggagtactg gccggtgtat ggcactaatc cccttgagtt
841 tgagttcttg tggggctcta gagcccacag ggaaatcaca aagatggaag ccctgaagtt
901 tgtgtcagat gcccatgatg aagaaccctg gagctggcca gaagaatata ataaggccct
961 ggaaggtgac aaaaccaaag aaagaagcct gactgctggc ttagagttct ggtcggagga
1021 cactatgaat gataaggcaa atgatttggt ccagttggct attagtgtca ctgaggagat
1081 gctgcctata catcaggatg agctattggc tcacactggc aaagaatttg aggatgtgtt
1141 cccaaatatc ctcaatagag ctactctaat tcttgatatg ttctatgggt tgtctctgat
1201 tgaggttgat accagtgagc acatctacct ccttgtccag caaccagaat cagaggaaga
1261 gcaagtgatg ctagagagcc tggggagacc cactcaagaa tatgtaatgc caatcctagg
1321 tttgatcttc ctgatgggca accgtgtcaa agaggccaat gtctggaact tgcttcgaag
1381 atttagtgtg gatgtaggga gaaagcattc catcacccgt aagcttatga gacagcgcta
1441 tctggaatgc aggccactgt cctactctaa tccagttgaa tatgagcttc tatggggtcc
1501 tcgagctcac catgaaacca tcaaaatgaa agtcttggag tacatggcca ggctctacag
1561 aaagcgacca cagaactggc cagaacaata tagggaggct gtggaagatg aggaggccag
1621 agccaaatct gaggcaacta tcatgttttt ccttgacccc acgtgaagtc tagggaatat
1681 gtatcacttc agctgagtgg cataagttaa agatgccttg gtaaaatagg catt
//