LOCUS BC111746 5311 bp mRNA linear HTC 27-OCT-2008 DEFINITION Homo sapiens cadherin, EGF LAG seven-pass G-type receptor 3 (flamingo homolog, Drosophila), mRNA (cDNA clone IMAGE:40068066), with apparent retained intron. ACCESSION BC111746 VERSION BC111746.1 KEYWORDS HTC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 5311) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 5311) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (07-JAN-2006) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Baylor Human Genome Sequencing Center cDNA Library Preparation: Baylor Human Genome Sequencing Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAM Plate: 17 Row: o Column: 6 This clone has the following problem: retained intron. FEATURES Location/Qualifiers source 1..5311 /db_xref="H-InvDB:HIT000386650" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:40068066" /tissue_type="PCR rescued clones" /clone_lib="NIH_MGC_283" /note="Vector: pCR-Blunt II-TOPO with reversed insert; Clone identification sequence tag: TTTTGGCC" BASE COUNT 962 a 1756 c 1390 g 1203 t ORIGIN 1 tctcctcctt ccgtgccctc ccttgtggct cccatacccc tgtgttttcc ccacgtgtcc 61 tcatggctct ttgactgctc tcctgtttct ttgtgggacc tcccatctcc cccagtgtcc 121 tccagagacc tccatgttcc cgtgtgagtt cctttttttc acgtttcgtg tgtggcccct 181 gtgtgtcctc ccgtgttccc tgcatgagtc ctacatgagc cttgcatgtc ctcctgtgtc 241 ttcccatgtc cccacagcag gacccttcgc agctccttcc tgctgcttct gctggtcagt 301 gcctcctggc tctttgggct cctggcagtc aaccacagca tcctagcctt ccactacctc 361 catgctggac tctgcggcct ccaggtgact ctggtgcccc tcccttgccc cagaaccagg 421 tgggccttca gtaggctggg gccatcccta ggcagacgtt gaccctaggc ctggagctga 481 ctcttactgg ataactttgc caggctgggt actaccccag accagacact ggccctagct 541 gctgccccca ggcctggagc tgactctaac ttaggcactg atcccagact gagtgctgat 601 cttggatcga ccttcaccaa caccaaggct cccgacccct tgctgatcca caccgacctt 661 acagactcca gccactcctg ctgctccatc ctctcccctg ctgaccttcc ccaactccct 721 tactgagtcc cgcatgggct cctcactgac ccacactagc ctacagtgac tgaccccatt 781 gctgacccac agtgacttat actggtccct gattgatccc tgccgactct gctttgaccc 841 tcgctgaccc acagggcctg gcggtgctgc tgctcttctg tgtcctaaat gcagatgctc 901 gggctgcctg gatgccagcc tgtctgggca ggaaggcagc gcctgaggag gcaaggccag 961 cacctgggct ggtgagtcgg gatgggggcc ctgagaagcc agagttttag gctgcttcag 1021 ggttagctca cactctgtcc ctaccacccc cagggacctg gggcctacaa caacacggct 1081 ctctttgagg agagtggcct catccgcatc actctgggcg cctccaccgt ctcctctgtg 1141 agcagtgccc gctccggccg gacccaggac caggacagcc agcggggccg cagctacctc 1201 agggacaatg tcctggttcg acatggctca gccgctgacc acactgacca cagcctccag 1261 gctcatgctg gccccactga cctggacgtg gccatgttcc atcgagatgc tggtggagtt 1321 ggggcctggg gcagggagga gggaggcaga ggatctctcc ccatcccctt ttcttctacc 1381 ccatactggg agcagtggct gactggggtg ggacgatctc ccccagggtc cctgcctcag 1441 gaggcaccta cctctccagc cctggttctc ccagtccact cctgattcgt ccttccctct 1501 gataagtccc agcccttctg ctgctacctc cacttcaagc cccggttcct gtccccaacc 1561 ctaaccccct tgccgtaccc acctctagac cctcaactcc aaattccctt atctccaagt 1621 cccttacctc tgaaagtact tctgactttc ccaactccag gcgcagactc cgactctgac 1681 agtgacctgt ccttggagga ggagaggagt ctctccattc catcttcaga aagcgaggac 1741 aatggccgga cgcgggggcg cttccaacgg ccactctgcc gagcagccca gagtgagagg 1801 ctcctcaccc accccaaaga tgtggatggc aatgacctcc tgtcctactg gccagccctg 1861 ggggagtgcg aggcagcccc ctgtgctctg cagacttggg gctctgaaag gcgcctgggg 1921 ctggacacca gcaaggatgc agctaacaac aaccagccag acccggccct gaccagtggg 1981 gatgagactt ctctgggccg ggcccagcgc cagaggaaag gtacagtccc tgagccctgg 2041 cccacaccgc agacacgctg ggggctgctc atgccctgag ccaagggatt gcagcttcct 2101 catcccaaac tgagagctct tcttactctg acctagggcg cttctgcttc tctagcctgc 2161 ttcacggtcc tcagggactg ctcctgtcct gacctgggaa ttctctgtcc ccctctaccc 2221 tggccagcac cacaggggga ccacaggcga ccactcctgc cccagcccat ctgtttttca 2281 gagaccctag gagctgcttc cccctgcccc ccacccagat cccagagccc gtgctctgat 2341 ctggaagatt tctgccccct actctgcttt tatggggacc cggagaagag gtttctgccc 2401 tcacccttgc atcacaggga cctggggact gctcctgtcc aacccggggg gttcctgcat 2461 ttcagccagg cctgcattgt caggacctga gggctgcccc tcttctgacc tcagggagtt 2521 tgccccatcc cctgcaccat gagacctgcc cgccctcccc ctgccccggg accacaactg 2581 gaagatgact gcccttccac tctgacccct gtcctgctgc ctctctggga ccaccagggt 2641 tgcctctgct gctccccaag gggttcctgc tcccatccct gtgttggaag gatcccaagg 2701 gctgccacac ccctagactc agcaattcct gcctgccctc cccctcccac acaaaccctg 2761 ccccccattt tcttcctctc acaggcatcc tgaagaaccg gttgcaatac ccactggtgc 2821 cacagacccg aggtgcccct gagctgtcct ggtgccgtgc agccaccttg ggccaccgtg 2881 ctgtgccagc tgcctcttac ggtcgcatct atgctggcgg gggcacgggc agcctttcac 2941 agccagccag ccgctactct tctagagaac agctggacct gctcctccgg cggcaactga 3001 gccgtgagcg actagaggaa gcccctgccc ctgttctacg tcccctgagc cggccagggt 3061 cccaggaatg catggatgct gcaccaggcc gactggagcc caaagatcgg ggcagcaccc 3121 tgccacggag gcagccacct cgggactacc ctggcgccat ggctggccgc ttcgggtcac 3181 gggatgcgct cgacttaggg gcacctcgag agtggttgag cacgctgcct ccgccccgcc 3241 gcacccggga ccttgaccca cagcccccac ctctgcccct gtctccccag cggcaactct 3301 caagggaccc cctcttgcca tcccggccgc tggactctct gtctaggagc tcgaactctc 3361 gggagcagct ggaccaggtg cctagccggc acccctcacg agaagccctt gggccactcc 3421 cgcagctgct cagagctagg gaggactcgg tcagtggccc cagccatggc ccctccacag 3481 aacagttgga cattctttcc tccatccttg cctctttcaa ctcctcggcc ctctcctctg 3541 tgcaatcttc aagcacaccc ttgggccctc acaccactgc cacaccttct gccacagcct 3601 ctgtgcttgg gccctccacg ccacgttctg ccacgtctca cagcatctcg gagctgtcgc 3661 cagactcaga agttcccaga agtgagggtc actcctgagg ggatgacggc gtggacgagg 3721 aacagctgag ggcgacagag gatctaggct aacaggagag actccaggag tgggggcaga 3781 tcccaaggca gcctcctgct ccccagtggt gggtgcccca gctctacctg gtgtggcagg 3841 gctgaggctc catgtgcatc tgtgagcatg cgtgtgacag gtgcagagac gggggactgg 3901 agggagactt ttatacgttt tgtacctttg taaccagaga gatgcttatg ttatttttca 3961 gcttttctgt ctcctggggg gtttgaggct gggctgggag ggggagggag atagagggag 4021 agatgcagtt tgaccccatt tgggtcctga gcaaacccta tgctcatctc tctctccttc 4081 ctggggtgga ctcagatggg tgggacacat gccttcctcc ccctattcca cccccaagtt 4141 gatctgagta tcgtcagggg cccaaagtac agaattgttc tttgcttttt attgaatgct 4201 ccaaaggcca aacttctggg gctgggggtt ggtcttggaa acaggggtcc tctgacttcc 4261 tcatgggggc ttgctcatac cgcccctcct ggtggatgtg tgtgtttatt atgtggagtc 4321 cctgccactt actgccttat gacctaggac tgatgctgtg gggtgctggt ggagcagctg 4381 atgtcgtgtt tacagagcaa ggcttccctg tctcccacgg ggaggggctc gggcctctag 4441 tcagacattc ctgcagaggg tcggtggagg ggtcattcac ctgcccctgc agcaagcaaa 4501 agttgtctgt ggtgccattt gattccctga cactgccccc tgcttgaatt gattccgaag 4561 ggtagggtgg gaaggtgagc aaagggagca gaaacaaggg aattcaagac ccagaatgta 4621 ggtgccactg cctcctatgt ttacaggatc ctccgtggcc ctaggcacct gggctgcagg 4681 aagtgactcc gttccactcc tcctttattc ccttaaaaag ggaaaaatga ctgttacgac 4741 cctgttcaca aaactcttac ttttgctatt ttgtctgctg tccagaactg aagactttaa 4801 aattttgtta ctgtttacaa gtccagattc aaaaaatgtt tttactttgt ttacaactca 4861 aaactttgag ttttacactt tgtttacagt agataatttt ttttcctttg tttccaagtg 4921 aaaggtaggg aaagtgggag agggacttgg aggacccacc tgtgaggacc ctgacctggc 4981 catcttgagg ggttttctaa cccccaggtc tcccaggccg aaggtcagcc ttgagtcccg 5041 tttaacagca gatccagaag accttgagag taggcgtcct ctaaccacgg gggagagtgg 5101 ctgtgcaggg ctggggggtg gtctgtgcag acacctcctc acccaccacc ccatgcatac 5161 tcttgggaag cagcttcctg ggagattaga aattctactt ccctgactgg agctaaatcc 5221 caccagccag gacccaaact ctccttaccg agaaggaccc cagctcttga agggctgagt 5281 ggcctgctgg gggtgggagg gtgtggtctt g //