LOCUS BC111571 845 bp mRNA linear HUM 29-AUG-2008
DEFINITION Homo sapiens surfactant protein A2B, mRNA (cDNA clone MGC:133366
IMAGE:40069329), complete cds.
ACCESSION BC111571
VERSION BC111571.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 845)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 845)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (28-DEC-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 17 Row: p Column: 19.
FEATURES Location/Qualifiers
source 1..845
/db_xref="H-InvDB:HIT000386644_03"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:133366 IMAGE:40069329"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: AGTAAGAG"
gene 1..845
/gene="SFTPA2B"
/gene_synonym="AC068139.3"
/gene_synonym="SFTPA2"
/gene_synonym="SP-2A"
/gene_synonym="SP-A1"
/gene_synonym="SP-A2"
/gene_synonym="SPAII"
/db_xref="GeneID:6436"
/db_xref="HGNC:HGNC:23441"
CDS 77..823
/gene="SFTPA2B"
/gene_synonym="AC068139.3"
/gene_synonym="SFTPA2"
/gene_synonym="SP-2A"
/gene_synonym="SP-A1"
/gene_synonym="SP-A2"
/gene_synonym="SPAII"
/codon_start=1
/product="surfactant protein A2B"
/protein_id="AAI11572.1"
/db_xref="GeneID:6436"
/db_xref="HGNC:HGNC:23441"
/translation="MWLCPLALTLILMAASGAACEVKDVCVGSPGIPGTPGSHGLPGR
DGRDGVKGDPGPPGPMGPPGETPCPPGNNGLPGAPGVPGERGEKGEAGERGPPGLPAH
LDEELQATLHDFRHQILQTRGALSLQGSIMTVGEKVFSSNGQSITFDAIQEACARAGG
RIAVPRNPEENEAIASFVKKYNTYAYVGLTEGPSPGDFRYSDGTPVNYTNWYRGEPAG
RGKEQCVEMYTDGQWNDRNCLYSRLTICEF"
BASE COUNT 194 a 226 c 266 g 159 t
ORIGIN
1 gcagctggag gctctgtgtg tgggtcgctg atttcttgga gcctgaaaag aaggagcagc
61 gactggaccc agagccatgt ggctgtgccc tctggccctc accctcatct tgatggcagc
121 ctctggtgct gcgtgcgaag tgaaggacgt ttgtgttgga agccctggta tccccggcac
181 tcctggatcc cacggcctgc caggcaggga cgggagagat ggtgtcaaag gagaccctgg
241 ccctccaggc cccatgggtc cgcctggaga aacaccatgt cctcctggga ataatgggct
301 gcctggagcc cctggtgtcc ctggagagcg tggagagaag ggggaggctg gcgagagagg
361 ccctccaggg cttccagctc atctagatga ggagctccaa gccacactcc acgacttcag
421 acatcaaatc ctgcagacaa ggggagccct cagtctgcag ggctccataa tgacagtagg
481 agagaaggtc ttctccagca atgggcagtc catcactttt gatgccattc aggaggcatg
541 tgccagagca ggcggccgca ttgctgtccc aaggaatcca gaggaaaatg aggccattgc
601 aagcttcgtg aagaagtaca acacatatgc ctatgtaggc ctgactgagg gtcccagccc
661 tggagacttc cgctactcag acgggacccc tgtaaactac accaactggt accgagggga
721 gcccgcaggt cggggaaaag agcagtgtgt ggagatgtac acagatgggc agtggaatga
781 caggaactgc ctgtactccc gactgaccat ctgtgagttc tgagaggcat ttaggccatg
841 ggaca
//