LOCUS BC111570 815 bp mRNA linear HUM 29-AUG-2008
DEFINITION Homo sapiens surfactant protein A1B, mRNA (cDNA clone MGC:133365
IMAGE:40069324), complete cds.
ACCESSION BC111570
VERSION BC111570.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 815)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 815)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (28-DEC-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 17 Row: p Column: 17.
FEATURES Location/Qualifiers
source 1..815
/db_xref="H-InvDB:HIT000386643_03"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:133365 IMAGE:40069324"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: TGTGAGAC"
gene 1..815
/gene="SFTPA1B"
/gene_synonym="AC068139.6"
/gene_synonym="PSAP"
/gene_synonym="PSPA"
/gene_synonym="SFTP1"
/gene_synonym="SFTPA1"
/db_xref="GeneID:6435"
/db_xref="HGNC:HGNC:23439"
/db_xref="MIM:178630"
CDS 47..793
/gene="SFTPA1B"
/gene_synonym="AC068139.6"
/gene_synonym="PSAP"
/gene_synonym="PSPA"
/gene_synonym="SFTP1"
/gene_synonym="SFTPA1"
/codon_start=1
/product="surfactant protein A1B"
/protein_id="AAI11571.1"
/db_xref="GeneID:6435"
/db_xref="HGNC:HGNC:23439"
/db_xref="MIM:178630"
/translation="MWLCPLALNLILMAASGAVCEVKDVCVGSPGIPGTPGSHGLPGR
DGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGEKGEPGERGPPGLPAH
LDEELQATLHDFRHQILQTRGALSLQGSIMTVGEKVFSSNGQSITFDAIQEACARAGG
RIAVPRNPEENEAIASFVKKYNTYAYVGLTEGPSPGDFRYSDGTPVNYTNWYRGEPAG
RGKEQCVEMYTDGQWNDRNCLYSRLTICEF"
BASE COUNT 187 a 218 c 255 g 155 t
ORIGIN
1 gcagctggag gctctgtgtg tgggagcagc gactggaccc agagccatgt ggctgtgccc
61 tctggccctc aacctcatct tgatggcagc ctctggtgct gtgtgcgaag tgaaggacgt
121 ttgtgttgga agccctggta tccccggcac tcctggatcc cacggcctgc caggcaggga
181 cgggagagat ggtctcaaag gagaccctgg ccctccaggc cccatgggtc cacctggaga
241 aatgccatgt cctcctggaa atgatgggct gcctggagcc cctggtatcc ctggagagtg
301 tggagagaag ggggagcctg gcgagagggg ccctccaggg cttccagctc atctagatga
361 ggagctccaa gccacactcc acgactttag acatcaaatc ctgcagacaa ggggagccct
421 cagtctgcag ggctccataa tgacagtagg agagaaggtc ttctccagca atgggcagtc
481 catcactttt gatgccattc aggaggcatg tgccagagca ggcggccgca ttgctgtccc
541 aaggaatcca gaggaaaatg aggccattgc aagcttcgtg aagaagtaca acacatatgc
601 ctatgtaggc ctgactgagg gtcccagccc tggagacttc cgctactcag acgggacccc
661 tgtaaactac accaactggt accgagggga gcccgcaggt cggggaaaag agcagtgtgt
721 ggagatgtac acagatgggc agtggaatga caggaactgc ctgtactccc gactgaccat
781 ctgtgagttc tgagaggcat ttaggccatg ggaca
//