LOCUS BC111545 2411 bp mRNA linear HUM 23-JUL-2007
DEFINITION Homo sapiens mex-3 homolog B (C. elegans), mRNA (cDNA clone
MGC:117199 IMAGE:5742971), complete cds.
ACCESSION BC111545
VERSION BC111545.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2411)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2411)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (28-DEC-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 233 Row: m Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 47894110.
FEATURES Location/Qualifiers
source 1..2411
/db_xref="H-InvDB:HIT000339947"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:117199 IMAGE:5742971"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2411
/gene="MEX3B"
/gene_synonym="DKFZp434J0617"
/gene_synonym="MEX-3B"
/gene_synonym="RNF195"
/db_xref="GeneID:84206"
/db_xref="HGNC:HGNC:25297"
/db_xref="MIM:611008"
CDS 415..2124
/gene="MEX3B"
/gene_synonym="DKFZp434J0617"
/gene_synonym="MEX-3B"
/gene_synonym="RNF195"
/codon_start=1
/product="mex-3 homolog B (C. elegans)"
/protein_id="AAI11546.1"
/db_xref="GeneID:84206"
/db_xref="HGNC:HGNC:25297"
/db_xref="MIM:611008"
/translation="MPSSLFADLERNGSGGGGGGSSGGGETLDDQRALQLALDQLSLL
GLDSDEGASLYDSEPRKKSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKT
PVRGEEPVFVVTGRKEDVAMARREIISAAEHFSMIRASRNKNTALNGAVPGPPNLPGQ
TTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAR
EEIEAHIALRTGGIIELTDENDFHANGTDVGFDLHHGSGGSGPGSLWSKPTPSITPTP
GRKPFSSYRNDSSSSLGSASTDSYFGGGTSSSAAATQRLADYSPPSPALSFAHNGNNN
NNGNGYTYTAGGEASVPSPDGCPELQPTFDPAPAPPPGAPLIWAQFERSPGGGPAAPV
SSSCSSSASSSASSSSVVFPGGGASAPSNANLGLLVHRRLHPGTSCPRLSPPLHMAPG
AGEHHLARRVRSDPGGGGLAYAAYANGLGAQLPGLQPSDTSGSSSSSSSSSSSSSSSS
GLRRKGSRDCSVCFESEVIAALVPCGHNLFCMECANRICEKSEPECPVCHTAVTQAIR
IFS"
BASE COUNT 479 a 811 c 733 g 388 t
ORIGIN
1 ggaaaaagcg ctgagtgagg gcgggcgggc gggcgggagg gagggagtgg aggagccggg
61 gaggggctcc ttaaagaaac gcttctgtcg ctcgcctgct cgcttttcgc tcggcattgc
121 ggccagccag ccgggcactc ggggggcacg cgcggccacc gctagagctc tgcccccacc
181 ccacccgcca gcaggtctgg ggtggggacc caggtggggg ctcctgcagc cactgcccgg
241 tgcggaccgc acggagcgac ccactcctcc cagcaccgag gaggaagcaa cggagccctc
301 agcaggcgac cggcctcccc gcccctgacc acccgcttcc cggctgcctt tgtggccgca
361 gcttctcgcc gccgagccga gggccggcgg gggcgcggcg cgcacggccg agcgatgccc
421 agctcgctgt tcgcagacct ggagcgcaac ggcagcggcg gcggcggcgg cggcagcagc
481 ggagggggag agaccctgga tgaccaaaga gccctgcagc tcgcgctcga ccagctctcc
541 ctgctggggc tggacagtga cgagggcgcc tctctgtacg acagcgagcc gcgcaagaag
601 agcgtgaaca tgaccgagtg cgtgccagta cccagttctg agcatgtcgc cgagatcgtg
661 gggcggcaag gttgtaaaat caaagcgctg cgggcgaaga ccaatactta catcaagacc
721 ccagttcgcg gggaggagcc tgtctttgtt gtgacgggca ggaaggagga tgtggccatg
781 gctcggaggg agatcatctc tgctgccgag cacttctcca tgatccgcgc ctcccggaat
841 aagaacacgg cactcaacgg cgcggtgcct gggccgccca acctgcccgg gcagaccacc
901 atccaagtgc gggtacccta ccgcgtggtg gggctcgtgg tggggcccaa aggcgccaca
961 atcaagcgca tccagcagca gacgcacacg tacatcgtga cgcccagccg ggataaggag
1021 ccggtgttcg aggtgaccgg catgccagag aacgtggatc gcgctcgaga ggagattgag
1081 gcgcacattg ctctgcgtac cggcggcatc attgagctca cagacgagaa cgacttccac
1141 gccaacggca ccgatgtggg cttcgatctg catcatgggt ccggcgggtc cggcccaggc
1201 agcctctgga gcaagcccac ccccagcatc acgcccaccc ccggccgcaa gcctttctct
1261 agctaccgca acgacagctc cagctcgctt ggcagtgctt ccacagactc ttatttcggc
1321 ggcgggacca gcagcagcgc agcggctacc cagcgcctgg cggactacag cccccctagc
1381 cccgccctga gctttgcgca caacggaaac aataacaata acggcaatgg gtacacctac
1441 acagcggggg gagaagcctc agtgccatcc cccgacggct gccccgagct gcagcccact
1501 tttgacccgg ctcccgctcc cccacctggg gcaccactta tctgggccca gttcgagcgg
1561 tccccgggag gcggacctgc agctccggta tcttcttcct gctcttcttc tgcatcttcg
1621 tctgcttctt cctcctccgt ggtcttcccc gggggtggcg ccagtgcgcc ctccaacgcc
1681 aacctggggc tattggtgca ccgccggctg caccctggca ccagctgccc gcgcctgtct
1741 ccacccttgc acatggcccc gggggcggga gagcaccacc tggctcgccg ggtgcgcagc
1801 gacccgggtg gaggaggcct ggcctacgcc gcttatgcca acgggctggg ggcacagctg
1861 cctggcttgc agccgtcgga cacgtcgggc tcctcctctt cgtccagctc ctcctccagc
1921 tcttcatcct cttcctccgg gcttcggcgt aaaggcagcc gcgactgctc cgtgtgcttc
1981 gagagcgaag tgattgccgc gctggtgccc tgtggccaca acctcttctg catggagtgc
2041 gccaatcgca tctgtgagaa gagcgagccc gagtgcccgg tctgccacac cgcggtcact
2101 caggccatcc gcatcttttc ttaaaggcag cgggcgctgc tagtgcgcac cgtgctgggg
2161 gaagggggaa cccctcccca tcctctttcc ccagcgctcg cctgcctccc tgggtgcccc
2221 ccctctccct tctccttccc ggccccacca acactctgag atccgagagg agcttggaaa
2281 gctgtagtat ccgctcattt ttaaaattta atttttaagt aaaggaattt gccaggaaaa
2341 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2401 aaaaaaaaaa a
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