LOCUS BC111489 1306 bp mRNA linear HUM 06-JUN-2006
DEFINITION Homo sapiens solute carrier family 6 (neurotransmitter transporter,
taurine), member 6, mRNA (cDNA clone IMAGE:5755891), complete cds.
ACCESSION BC111489
VERSION BC111489.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1306)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1306)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (28-DEC-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 255 Row: i Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 54607093
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1306
/db_xref="H-InvDB:HIT000339916"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5755891"
/tissue_type="Blood, adult leukocytes"
/clone_lib="NIH_MGC_118"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1306
/gene="SLC6A6"
/gene_synonym="TAUT"
/db_xref="GeneID:6533"
/db_xref="HGNC:HGNC:11052"
/db_xref="MIM:186854"
CDS 282..884
/gene="SLC6A6"
/gene_synonym="TAUT"
/codon_start=1
/product="SLC6A6 protein"
/protein_id="AAI11490.1"
/db_xref="GeneID:6533"
/db_xref="HGNC:HGNC:11052"
/db_xref="MIM:186854"
/translation="MATKEKLQCLKDFHKDILKPSPGKSPGTRPEDEAEGKPPQREKW
SSKIDFVLSVAGGFVGLGNVWRFPYLCYKNGGGAFLIPYFIFLFGSGLPVFFLEIIIG
QYTSEGGITCWEKICPLFSGIGYASVVIVSLLNVYYIVILAWATYYLFQSFQKELPWA
HCNHSWNTPHCMEDTMRKNKSVWITISSTNFTSPVIEFWE"
BASE COUNT 357 a 344 c 340 g 265 t
ORIGIN
1 cagacaacag acacgcgagg tcaggaagaa gccgcttata aattaccgct tccttcgcgc
61 cgccgccaac gccgagcccc gaggaccgca agcccagagg acaagctgcg ccaagaggga
121 gtgcggagcg ttcacccagc gggtcagaga gcgagcgggc aggcagcccc cggccggcgg
181 aacccggcac agccgagcag agcgcgggcg gcgccgcagc caccccagat ccagaaccag
241 aaccacagcc cttctgagga gctcccaaac aaagcaagga gatggccacc aaggagaagc
301 tgcagtgtct gaaagatttc cacaaggaca tcctgaagcc ctcaccaggg aagagcccag
361 gcacgcggcc tgaggacgag gctgagggaa aacctccgca gagggagaag tggtctagca
421 agatcgactt tgtgctctct gtggctggcg gcttcgtggg cttgggcaac gtctggcgct
481 tcccgtacct ctgctacaag aatggtggag gtgcgtttct cataccgtat tttattttcc
541 tgtttgggag cggcctgcct gtgtttttct tggagatcat cataggccag tacacctctg
601 aagggggcat cacctgctgg gaaaagatct gccccttgtt ctctggtatc ggctatgcct
661 ccgttgtaat tgtgtccctc ctgaatgtct actacatcgt catcctggcc tgggccacat
721 actacctgtt ccagtccttc cagaaggagc tgccctgggc acactgcaac cacagctgga
781 acacacctca ctgcatggag gacaccatgc gcaagaacaa gagtgtctgg atcaccatca
841 gctccaccaa cttcacctcc cctgtcatcg agttctggga gtaaggccac ctcattgaag
901 caaggaggag gacatgggtg gggcagagag gatggcccac ttccttatct cctcccctgg
961 gatacaggag ccactgtctt cgggggagtg ggaggagggt gcagatctgg agataaattt
1021 atgcctttgg ccatagacag gactggaatc ccagttctgc cacttactgg ctgtttgacc
1081 ttaggcaagc cactcctcct ttctgagcct cagtttcttt acctgtaaga taaaaagaat
1141 gaatcattac taccctgtga ggcaggtatg catacttatg ttgtctaaaa atgatacagt
1201 tttcttaatg tattttagga aaaaatatat tctgttattg cacagagaaa aaaaaaaaaa
1261 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
//