LOCUS BC111407 3433 bp mRNA linear HUM 08-SEP-2006
DEFINITION Homo sapiens mitogen-activated protein kinase kinase kinase 9, mRNA
(cDNA clone IMAGE:40036385), partial cds.
ACCESSION BC111407
VERSION BC111407.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3433)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3433)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (18-DEC-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 12 Row: p Column: 2.
FEATURES Location/Qualifiers
source 1..3433
/db_xref="H-InvDB:HIT000386607"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:40036385"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: AACCCGTG"
gene <1..3433
/gene="MAP3K9"
/gene_synonym="PRKE1"
/db_xref="GeneID:4293"
/db_xref="HGNC:HGNC:6861"
/db_xref="MIM:600136"
CDS <1..3314
/gene="MAP3K9"
/gene_synonym="PRKE1"
/codon_start=3
/product="MAP3K9 protein"
/protein_id="AAI11408.1"
/db_xref="GeneID:4293"
/db_xref="HGNC:HGNC:6861"
/db_xref="MIM:600136"
/translation="EPSRALLGCLASAAAAAPPGEDGAGAGAEEEEEEEEEAAAAVGP
GELGCDAPLPYWTAVFEYEAAGEDELTLRLGDVVEVLSKDSQVSGDEGWWTGQLNQRV
GIFPSNYVTPRSAFSSRCQPGGEDPSCYPPIQLLEIDFAELTLEEIIGIGGFGKVYRA
FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV
MEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILIL
QKVENGDLSNKILKITDFGLAREWHRTTKMSAAGTYAWMAPEVIRASMFSKGSDVWSY
GVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSR
PSFTNILDQLTTIEESGFFEMPKDSFHCLQDNWKHEIQEMFDQLRAKEKELRTWEEEL
TRAALQQKNQEELLRRREQELAEREIDILERELNIIIHQLCQEKPRVKKRKGKFRKSR
LKLKDGNRISLPSDFQHKFTVQASPTMDKRKSLINSRSSPPASPTIIPRLRAIQLTPG
ESSKTWGRSSVVPKEEGEEEEKRAPKKKGRTWGPGTLGQKELASGDEGSPQRREKANG
LSTPSESPHFHLGLKSLVDGYKQWSSSAPNLVKGPRSSPALPGFTSLMEMEDEDSEGP
GSGESRLQHSPSQSYLCIPFPRGEDGDGPSSDGIHEEPTPVNSATSTPQLTPTNSLKR
GGAHHRRCEVALLGCGAVLAATGLGFDLLEAGKCQLLPLEEPEPPAREEKKRREGLFQ
RSSRPRRSTSPPSRKLFKKEEPMLLLGDPSASLTLLSLSSISECNSTRSLLRSDSDEI
VVYEMPVSPVEAPPLSPCTHNPLVNVRVERFKRDPNQSLTPTHVTLTTPSQPSSHRRT
PSDGALKPETLLASRSPSSNGLSPSPGAGMLKTPSPSRDPGEFPRLPDPNVVFPPTPR
RWNTQQDSTLERPKTLEFLPRPRPSANRQRLDPWWFVSPSHARSTSPANSSSTETPSN
LDSCFASSSSTVEERPGLPALLPFQAGPLPPTERTLLDLDAEGQSQDSTVPLCRAELN
THRPAPYEIQQEFWS"
BASE COUNT 758 a 1029 c 1023 g 623 t
ORIGIN
1 tggagccctc cagagcgctt ctcggctgcc tagcgagcgc cgccgctgcc gccccgccgg
61 gggaggatgg agcaggggcc ggggccgagg aggaggagga ggaggaggag gaggcggcgg
121 cggcggtggg ccccggggag ctgggctgcg acgcgccgct gccctactgg acggccgtgt
181 tcgagtacga ggcggcgggc gaggacgagc tgaccctgcg gctgggcgac gtggtggagg
241 tgctgtccaa ggactcgcag gtgtccggcg acgagggctg gtggaccggg cagctgaacc
301 agcgggtggg catcttcccc agcaactacg tgaccccgcg cagcgccttc tccagccgct
361 gccagcccgg cggcgaggac cccagttgct acccgcccat tcagttgtta gaaattgatt
421 ttgcggagct caccttggaa gagattattg gcatcggggg ctttgggaag gtctatcgtg
481 ctttctggat aggggatgag gttgctgtga aagcagctcg ccacgaccct gatgaggaca
541 tcagccagac catagagaat gttcgccaag aggccaagct cttcgccatg ctgaagcacc
601 ccaacatcat tgccctaaga ggggtatgtc tgaaggagcc caacctctgc ttggtcatgg
661 agtttgctcg tggaggacct ttgaatagag tgttatctgg gaaaaggatt cccccagaca
721 tcctggtgaa ttgggctgtg cagattgcca gagggatgaa ctacttacat gatgaggcaa
781 ttgttcccat catccaccgc gaccttaagt ccagcaacat attgatcctc cagaaggtgg
841 agaatggaga cctgagcaac aagattctga agatcactga ttttggcctg gctcgggaat
901 ggcaccgaac caccaagatg agtgcggcag ggacgtatgc ttggatggca cccgaagtca
961 tccgggcctc catgttttcc aaaggcagtg atgtgtggag ctatggggtg ctactttggg
1021 agttgctgac tggtgaggtg ccctttcgag gcattgatgg cttagcagtc gcttatggag
1081 tggccatgaa caaactcgcc cttcctattc cttctacgtg cccagaacct tttgccaaac
1141 tcatggaaga ctgctggaat cctgatcccc actcacgacc atctttcacg aatatcctgg
1201 accagctaac caccatagag gagtctggtt tctttgaaat gcccaaggac tccttccact
1261 gcctgcagga caactggaaa cacgagattc aggagatgtt tgaccaactc agggccaaag
1321 aaaaggaact tcgcacctgg gaggaggagc tgacgcgggc tgcactgcag cagaagaacc
1381 aggaggaact gctgcggcgt cgggagcagg agctggccga gcgggagatt gacatcctgg
1441 aacgggagct caacatcatc atccaccagc tgtgccagga gaagccccgg gtgaagaaac
1501 gcaagggcaa gttcaggaag agccggctga agctcaagga tggcaaccgc atcagcctcc
1561 cttctgattt ccagcacaag ttcacggtgc aggcctcccc taccatggat aaaaggaaga
1621 gtcttatcaa cagccgctcc agtcctcctg caagccccac catcattcct cgccttcgag
1681 ccatccagtt gacaccaggt gaaagcagca aaacctgggg caggagctca gtcgtcccaa
1741 aggaggaagg ggaggaggag gagaagaggg ccccaaagaa gaagggacgg acgtgggggc
1801 cagggacgct tggtcagaag gagcttgcct cgggagatga aggatcccct cagagacgtg
1861 agaaagctaa tggtttaagt accccatcag aatctccaca tttccacttg ggcctcaagt
1921 ccctggtaga tggatataag cagtggtcgt ccagtgcccc caacctggtg aagggcccaa
1981 ggagtagccc ggccctgcca gggttcacca gccttatgga gatggaggat gaggacagtg
2041 aaggcccagg gagtggagag agtcgcctac agcattcacc cagccagtcc tacctctgta
2101 tcccattccc tcgtggagag gatggcgatg gcccctccag tgatggaatc catgaggagc
2161 ccaccccagt caactcggcc acgagtaccc ctcagctgac gccaaccaac agcctcaagc
2221 ggggcggtgc ccaccaccgc cgctgcgagg tggctctgct cggctgtggg gctgttctgg
2281 cagccacagg cctagggttt gacttgctgg aagctggcaa gtgccagctg cttcccctgg
2341 aggagcctga gccaccagcc cgggaggaga agaaaagacg ggagggtctt tttcagaggt
2401 ccagccgtcc tcgtcggagc accagccccc catcccgaaa gcttttcaag aaggaggagc
2461 ccatgctgtt gctaggagac ccctctgcct ccctgacgct gctctccctc tcctccatct
2521 ccgagtgcaa ctccacacgc tccctgctgc gctccgacag cgatgaaatt gtcgtgtatg
2581 agatgccagt cagcccagtc gaggcccctc ccctgagtcc atgtacccac aaccccctgg
2641 tcaatgtccg agtagagcgc ttcaaacgag atcctaacca atctctgact cccacccatg
2701 tcaccctcac caccccctcg cagcccagca gtcaccggcg gactccttct gatggggccc
2761 ttaagccaga gactctccta gccagcagga gcccctccag caatgggttg agccccagtc
2821 ctggagcagg aatgttgaaa acccccagtc ccagccgaga cccaggtgaa ttcccccgtc
2881 tccctgaccc caatgtggtc ttccccccaa ccccaaggcg ctggaacact cagcaggact
2941 ctaccttgga gagacccaag actctggagt ttctgcctcg gccgcgtcct tctgccaacc
3001 ggcaacggct ggacccttgg tggtttgtgt cccccagcca tgcccgcagc acctccccag
3061 ccaacagctc cagcacagag acgcccagca acctggactc ctgctttgct agcagtagca
3121 gcactgtaga ggagcggcct ggacttccag ccctgctccc gttccaggca gggccgctgc
3181 ccccgactga gcggacgctc ctggacctgg atgcagaggg gcagagtcag gacagcaccg
3241 tgccgctgtg cagagcggaa ctgaacacac acaggcctgc cccttatgag atccagcagg
3301 agttctggtc ttagcacgaa aaggattggg gcgggcaagg gggacagcca gcggagatga
3361 ggggagctgg cgggcacagc cctttctcag ggttggaccc cctgagatcc agccctactt
3421 cttgcactga taa
//