LOCUS BC111058 4973 bp mRNA linear HTC 23-JUL-2007 DEFINITION Homo sapiens Rho guanine nucleotide exchange factor (GEF) 10-like, mRNA (cDNA clone IMAGE:5745823), with apparent retained intron. ACCESSION BC111058 VERSION BC111058.1 KEYWORDS HTC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4973) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4973) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (07-DEC-2005) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 233 Row: n Column: 12 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis This clone has the following problem: retained intron. FEATURES Location/Qualifiers source 1..4973 /db_xref="H-InvDB:HIT000339872" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5745823" /tissue_type="Blood, adult leukocytes" /clone_lib="NIH_MGC_118" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" BASE COUNT 1022 a 1505 c 1479 g 967 t ORIGIN 1 ctgggatccc ctctcccggc acctgtacct tgctctgttg ggggctggaa ccctctccgg 61 agcctccctc actatctgac ctcctcccac tctcagaggc ttgggcctct gtccatctca 121 ttccgtcctc cgtctgaggt ccagctccac tcactcctgg gattccatgt caggctcctg 181 ttgaactttt tccctttagc tctgcatgtt ttatttcaaa aggaaagtgc caaaccacgc 241 tgccctgttc ttctcggggc ttattttctt ccccctttta gacttccaga agaaaactat 301 ttttagttcc tagtgatggg gacatgggca gctagccttc gccaggccag agcgggcggg 361 cctgagcagg gacagtggct tctggcagca tggacgccga gaacccaggc cccacaggac 421 gcagctttga tttctgcctg ttcaccctct cgctcacttg ctcacaatta ttcactgatg 481 gaatgttcca ggccctggga cgtagcaggg aactcctgag aaggagctac cgggcggctc 541 taaccccacg gggccccagg agctgcttgc accctaggac ctgggtccaa ggctggtcta 601 ggggggctct cagctcctga ggcctgagca gggtgtgctg tccctgcctt agctgtgtca 661 tcggcccatc tgactttcca ggtgactcgg aggaggagga catggggctc ctggaggtca 721 gcgtttcgga catcaagccc ccagccccag agctgggccc catgccagag ggcctgagcc 781 ctcagcaggt ggtccggagg catatcctgg gctccatcgt gcagagcgaa ggcagctacg 841 tggagtctct gaagcggata ctccaggact accgcaaccc cctgatggag atggagccca 901 aggcgctgag cgcccgcaag tgccaggtgg tgttcttccg cgtgaaggag atcctgcact 961 gccactccat gttccagatc gccctgtcct cccgcgtggc tgagtgggat tccaccgaga 1021 agatcgggga cctcttcgtg gcctcgtttt ccaagtccat ggtgctagat gtgtacagtg 1081 actacgtgaa caacttcacc agtgccatgt ccatcatcaa gaaggcctgc ctcaccaagc 1141 ctgccttcct cgagttcctc aagcgacggc aggtgtgcag cccagaccgt gtcaccctct 1201 acgggctgat ggtcaagccc atccagaggt tcccacagtt catactcctg cttcaggaca 1261 tgctgaagaa cacccccagg ggccatccgg acaggctgtc gctgcagctg gccctcacag 1321 agctggagac gctggctgag aagctgaacg agcagaagcg gctggctgac caggtggctg 1381 agatccagca gctgaccaag agcgtcagtg accgcagcag cctcaacaag ctgttgacct 1441 caggccagcg gcagctgctc ctgtgtgaga cgttgacgga gaccgtgtac ggtgaccgcg 1501 ggcagctaat taagtccaag gagcgtcggg tcttcctgct caacgacatg cttgtctgtg 1561 ccaacatcaa cttcaagggc cagctggaga tcagcagcct ggtgcccctg gggcccaagt 1621 atgtggtgaa gtggaacacg gcgctgcccc aggtgcaggt ggtggaggtg ggccaggacg 1681 gtggcaccta tgacaaggac aatgtgctca tccagcactc aggcgccaag aaggcctctg 1741 cctcagggca ggctcagaat aaggtgtacc tcggcccccc acgcctcttc caggagctgc 1801 aggacctgca gaaggacctg gccgtggtgg agcagatcac gcttctcatc agcacgctgc 1861 acggcaccta ccagaacctg aacatgactg tggctcaaga ctggtgcctg gccctgcaga 1921 ggctgatgcg ggtgaaggag gaagagatcc actcggccaa caagtgccgt ctcaggctcc 1981 tgcttcctgg gaaacccgac aaatgaggaa ggtgaggctc agagtttcag gagaggctga 2041 aggccacatc gtgagagaca gagctgggtc ctgatgaggt ctgactctga agcccaggcc 2101 agtgcaatga gggggctcaa tgcccaggtt ttggcctcca gggtggggtg aaggtgggga 2161 tagagtgtca caagcacagt ggctgcaagg aagagaaggt tggagcacta tcatttgaga 2221 ggcacgtggt cagacatgta aggtgtctaa gacctgtgga cagctgaccg ctgaccaggt 2281 ggagtcacag cctgcagagg ctctgccggg cacaaagcca gaggctcctg gagccaggct 2341 ggggagcgtg gctcagccac cctggccagg tccggccgcc ccattagctt catggtggtt 2401 ttcatcaccc ccaaccccct gagcaagatt tcctgggtca acaggttaca tttggccaaa 2461 atcggactcc gggaggagaa ccagccaggc tggctatgcc cggatgagga caagaagagc 2521 aaagccccat tctggtgccc gatcctggcc tgctgcatcc ctgccttctc ctcccgggca 2581 ctcagcctgc agcttggggc cctggtccac agtcctgtca actgtcccct gctgggtttc 2641 tcagccgtca gcacctccct tccacagggc tacctctggg tcgggggcgg acaggaaggc 2701 gcagggggcc aggtggaaat cttttccttg aaccggccct cgccccgcac cgtcaagtcc 2761 ttcccactgg cagcccctgt gctctgcatg gagtatatcc cggagctgga ggaggaggcg 2821 gagagcagag acgagagccc gacagttgct gacccctcgg ccacagtgca tccaaccatc 2881 tgcctcgggc tccaggatgg cagcatcctc ctctacagca gtgtggacac tggcacccag 2941 tgcctggtga gctgcaggag cccaggtctg cagcctgtgc tctgcctgcg acacagcccc 3001 ttccacctgc tcgctggcct gcaggatggg acccttgctg cttaccctcg gaccagcgga 3061 ggtgtcctgt gggacctgga gagccctccc gtgtgcctga ctgtggggcc cgggcctgtc 3121 cgcaccctgt tgagcctgga ggatgccgtg tgggccagct gtgggccccg ggtcactgtc 3181 ctggaagcca ccaccctgca gcctcagcaa agcttcgagg cgcaccagga cgaggcagtg 3241 agcgtgacac acatggtgaa ggcgggcagc ggcgtctgga tggccttctc ctccggcacc 3301 tccatccgcc tcttccacac tgagaccctg gagcatctgc aagagatcaa catcgccacc 3361 aggaccacct tcctcctgcc agggcctgca gggtgtgctg tgacctcatc tgaagaagca 3421 cccacacggg caggccctga ggggctgcag cagagccacc tcgatgcctc tcgagcccca 3481 cccggcccta cttatgcctt ccatctgcac caacaccgat gagaagcttg cacctcccca 3541 gtcttccctg gttttgctcg tagctggctg gctggatccc tgcatggatt gcccttggac 3601 aaccctttgt gccggatgac ctggccgccg tgtattgaga gcgcacacag accaggcgct 3661 gtgcctgtgg tgttccccca atgcatccgt atggcagccc cactttacac aggcggaaac 3721 tgaggctggt taggggagtg ctcagctgca ggacctcgtg gccagacccc aggcaggcca 3781 gaagcacttg tgtgtcacca gcctcctgat ctgccagggt ctgctctggg tgggcactga 3841 ccagggtgtc atcgtcctgc tgcccgtgcc tcggctggaa ggcatcccca agatcacagg 3901 gaaaggcatg gtctcactca acgggcactg tgggcctgtg gccttcctgg ctgtggctac 3961 cagcatcctg gcccctgaca tcctgcggag tgaccaggag gaggctgagg ggccccgggc 4021 tgaggaggac aagccagacg ggcaggcaca cgagcccatg cccgatagcc acgtgggccg 4081 agagctgacc cgcaagaagg gcatcctctt gcagtaccgc ctgcgctcca ccgcacacct 4141 cccgggcccg ctgctctcca tgcgggagcc ggcgcctgct gatggcgcag ctttggagca 4201 cagcgaggag gacggctcca tttacgagat ggccgacgac cccgacatct gggtgcgcag 4261 ccggccctgc gcccgcgacg cccaccgcaa ggagatttgc tctgtggcca tcatctccgg 4321 cgggcagggc taccgcaact ttggcagcgc tctgggcagc agtgggaggc aggccccgtg 4381 tggggagacg gacagcaccc tcctcatctg gcaggtgccc ttgatgctat agcgcctccc 4441 ctctcccctc agagggcaca gctgcaggcc tgaccaaggc cacgcccggc tctcgtgctc 4501 taggacctgc acgggacttg tggatgggcc tggactctcc agaaactact tgggcagagc 4561 aaaggaaaac ctcttgtttt aaaaaaattt ttttcagagt gttttgggga ggagttttag 4621 ggcttgggga gagggaggac acatctggag gaaatggcct tctttttaaa agcaaaaaac 4681 acaaaacctc acaactgcct ggcaagccca gtatcacttg tttgggccct agcgggactc 4741 caaggcagcc acacgcccct cctggaaggg tgtgtgcgtg tgagtgtgtg cgagtgtgtg 4801 ggctggtgtg tgaatatcta taaataagta tatatggtgt atattatatg tgtataaata 4861 aagtctgtac atattggagc tctgggagat gctggaataa aagacaagag ttacatctgg 4921 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa //