LOCUS BC111058 4973 bp mRNA linear HTC 23-JUL-2007
DEFINITION Homo sapiens Rho guanine nucleotide exchange factor (GEF) 10-like,
mRNA (cDNA clone IMAGE:5745823), with apparent retained intron.
ACCESSION BC111058
VERSION BC111058.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4973)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4973)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-DEC-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 233 Row: n Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..4973
/db_xref="H-InvDB:HIT000339872"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5745823"
/tissue_type="Blood, adult leukocytes"
/clone_lib="NIH_MGC_118"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 1022 a 1505 c 1479 g 967 t
ORIGIN
1 ctgggatccc ctctcccggc acctgtacct tgctctgttg ggggctggaa ccctctccgg
61 agcctccctc actatctgac ctcctcccac tctcagaggc ttgggcctct gtccatctca
121 ttccgtcctc cgtctgaggt ccagctccac tcactcctgg gattccatgt caggctcctg
181 ttgaactttt tccctttagc tctgcatgtt ttatttcaaa aggaaagtgc caaaccacgc
241 tgccctgttc ttctcggggc ttattttctt ccccctttta gacttccaga agaaaactat
301 ttttagttcc tagtgatggg gacatgggca gctagccttc gccaggccag agcgggcggg
361 cctgagcagg gacagtggct tctggcagca tggacgccga gaacccaggc cccacaggac
421 gcagctttga tttctgcctg ttcaccctct cgctcacttg ctcacaatta ttcactgatg
481 gaatgttcca ggccctggga cgtagcaggg aactcctgag aaggagctac cgggcggctc
541 taaccccacg gggccccagg agctgcttgc accctaggac ctgggtccaa ggctggtcta
601 ggggggctct cagctcctga ggcctgagca gggtgtgctg tccctgcctt agctgtgtca
661 tcggcccatc tgactttcca ggtgactcgg aggaggagga catggggctc ctggaggtca
721 gcgtttcgga catcaagccc ccagccccag agctgggccc catgccagag ggcctgagcc
781 ctcagcaggt ggtccggagg catatcctgg gctccatcgt gcagagcgaa ggcagctacg
841 tggagtctct gaagcggata ctccaggact accgcaaccc cctgatggag atggagccca
901 aggcgctgag cgcccgcaag tgccaggtgg tgttcttccg cgtgaaggag atcctgcact
961 gccactccat gttccagatc gccctgtcct cccgcgtggc tgagtgggat tccaccgaga
1021 agatcgggga cctcttcgtg gcctcgtttt ccaagtccat ggtgctagat gtgtacagtg
1081 actacgtgaa caacttcacc agtgccatgt ccatcatcaa gaaggcctgc ctcaccaagc
1141 ctgccttcct cgagttcctc aagcgacggc aggtgtgcag cccagaccgt gtcaccctct
1201 acgggctgat ggtcaagccc atccagaggt tcccacagtt catactcctg cttcaggaca
1261 tgctgaagaa cacccccagg ggccatccgg acaggctgtc gctgcagctg gccctcacag
1321 agctggagac gctggctgag aagctgaacg agcagaagcg gctggctgac caggtggctg
1381 agatccagca gctgaccaag agcgtcagtg accgcagcag cctcaacaag ctgttgacct
1441 caggccagcg gcagctgctc ctgtgtgaga cgttgacgga gaccgtgtac ggtgaccgcg
1501 ggcagctaat taagtccaag gagcgtcggg tcttcctgct caacgacatg cttgtctgtg
1561 ccaacatcaa cttcaagggc cagctggaga tcagcagcct ggtgcccctg gggcccaagt
1621 atgtggtgaa gtggaacacg gcgctgcccc aggtgcaggt ggtggaggtg ggccaggacg
1681 gtggcaccta tgacaaggac aatgtgctca tccagcactc aggcgccaag aaggcctctg
1741 cctcagggca ggctcagaat aaggtgtacc tcggcccccc acgcctcttc caggagctgc
1801 aggacctgca gaaggacctg gccgtggtgg agcagatcac gcttctcatc agcacgctgc
1861 acggcaccta ccagaacctg aacatgactg tggctcaaga ctggtgcctg gccctgcaga
1921 ggctgatgcg ggtgaaggag gaagagatcc actcggccaa caagtgccgt ctcaggctcc
1981 tgcttcctgg gaaacccgac aaatgaggaa ggtgaggctc agagtttcag gagaggctga
2041 aggccacatc gtgagagaca gagctgggtc ctgatgaggt ctgactctga agcccaggcc
2101 agtgcaatga gggggctcaa tgcccaggtt ttggcctcca gggtggggtg aaggtgggga
2161 tagagtgtca caagcacagt ggctgcaagg aagagaaggt tggagcacta tcatttgaga
2221 ggcacgtggt cagacatgta aggtgtctaa gacctgtgga cagctgaccg ctgaccaggt
2281 ggagtcacag cctgcagagg ctctgccggg cacaaagcca gaggctcctg gagccaggct
2341 ggggagcgtg gctcagccac cctggccagg tccggccgcc ccattagctt catggtggtt
2401 ttcatcaccc ccaaccccct gagcaagatt tcctgggtca acaggttaca tttggccaaa
2461 atcggactcc gggaggagaa ccagccaggc tggctatgcc cggatgagga caagaagagc
2521 aaagccccat tctggtgccc gatcctggcc tgctgcatcc ctgccttctc ctcccgggca
2581 ctcagcctgc agcttggggc cctggtccac agtcctgtca actgtcccct gctgggtttc
2641 tcagccgtca gcacctccct tccacagggc tacctctggg tcgggggcgg acaggaaggc
2701 gcagggggcc aggtggaaat cttttccttg aaccggccct cgccccgcac cgtcaagtcc
2761 ttcccactgg cagcccctgt gctctgcatg gagtatatcc cggagctgga ggaggaggcg
2821 gagagcagag acgagagccc gacagttgct gacccctcgg ccacagtgca tccaaccatc
2881 tgcctcgggc tccaggatgg cagcatcctc ctctacagca gtgtggacac tggcacccag
2941 tgcctggtga gctgcaggag cccaggtctg cagcctgtgc tctgcctgcg acacagcccc
3001 ttccacctgc tcgctggcct gcaggatggg acccttgctg cttaccctcg gaccagcgga
3061 ggtgtcctgt gggacctgga gagccctccc gtgtgcctga ctgtggggcc cgggcctgtc
3121 cgcaccctgt tgagcctgga ggatgccgtg tgggccagct gtgggccccg ggtcactgtc
3181 ctggaagcca ccaccctgca gcctcagcaa agcttcgagg cgcaccagga cgaggcagtg
3241 agcgtgacac acatggtgaa ggcgggcagc ggcgtctgga tggccttctc ctccggcacc
3301 tccatccgcc tcttccacac tgagaccctg gagcatctgc aagagatcaa catcgccacc
3361 aggaccacct tcctcctgcc agggcctgca gggtgtgctg tgacctcatc tgaagaagca
3421 cccacacggg caggccctga ggggctgcag cagagccacc tcgatgcctc tcgagcccca
3481 cccggcccta cttatgcctt ccatctgcac caacaccgat gagaagcttg cacctcccca
3541 gtcttccctg gttttgctcg tagctggctg gctggatccc tgcatggatt gcccttggac
3601 aaccctttgt gccggatgac ctggccgccg tgtattgaga gcgcacacag accaggcgct
3661 gtgcctgtgg tgttccccca atgcatccgt atggcagccc cactttacac aggcggaaac
3721 tgaggctggt taggggagtg ctcagctgca ggacctcgtg gccagacccc aggcaggcca
3781 gaagcacttg tgtgtcacca gcctcctgat ctgccagggt ctgctctggg tgggcactga
3841 ccagggtgtc atcgtcctgc tgcccgtgcc tcggctggaa ggcatcccca agatcacagg
3901 gaaaggcatg gtctcactca acgggcactg tgggcctgtg gccttcctgg ctgtggctac
3961 cagcatcctg gcccctgaca tcctgcggag tgaccaggag gaggctgagg ggccccgggc
4021 tgaggaggac aagccagacg ggcaggcaca cgagcccatg cccgatagcc acgtgggccg
4081 agagctgacc cgcaagaagg gcatcctctt gcagtaccgc ctgcgctcca ccgcacacct
4141 cccgggcccg ctgctctcca tgcgggagcc ggcgcctgct gatggcgcag ctttggagca
4201 cagcgaggag gacggctcca tttacgagat ggccgacgac cccgacatct gggtgcgcag
4261 ccggccctgc gcccgcgacg cccaccgcaa ggagatttgc tctgtggcca tcatctccgg
4321 cgggcagggc taccgcaact ttggcagcgc tctgggcagc agtgggaggc aggccccgtg
4381 tggggagacg gacagcaccc tcctcatctg gcaggtgccc ttgatgctat agcgcctccc
4441 ctctcccctc agagggcaca gctgcaggcc tgaccaaggc cacgcccggc tctcgtgctc
4501 taggacctgc acgggacttg tggatgggcc tggactctcc agaaactact tgggcagagc
4561 aaaggaaaac ctcttgtttt aaaaaaattt ttttcagagt gttttgggga ggagttttag
4621 ggcttgggga gagggaggac acatctggag gaaatggcct tctttttaaa agcaaaaaac
4681 acaaaacctc acaactgcct ggcaagccca gtatcacttg tttgggccct agcgggactc
4741 caaggcagcc acacgcccct cctggaaggg tgtgtgcgtg tgagtgtgtg cgagtgtgtg
4801 ggctggtgtg tgaatatcta taaataagta tatatggtgt atattatatg tgtataaata
4861 aagtctgtac atattggagc tctgggagat gctggaataa aagacaagag ttacatctgg
4921 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
//