LOCUS BC111052 3005 bp mRNA linear HTC 28-DEC-2005
DEFINITION Homo sapiens cDNA clone IMAGE:5575911, with apparent retained
intron.
ACCESSION BC111052
VERSION BC111052.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3005)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3005)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-DEC-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 233 Row: l Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..3005
/db_xref="H-InvDB:HIT000339866"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5575911"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_92"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 968 a 563 c 673 g 801 t
ORIGIN
1 agcattttgg attttggatc tttggttagg gatgcccaac tggtataatg caaatattcc
61 aaaatctgaa aaaaatccaa aattcaaaaa tcttctgacc ccaagcattt cagataaggg
121 aaaattaacc tgtattttca accgccattg ggagacctga acaaggtata ggtcaaaagg
181 aaagttagct gatgaagtag aaatgaatga cagtggtgtg tgcttcataa gtgctggttg
241 tgggaatgaa tgaacttgta acagatactc ctatgcaaag caagaaactt ctgaagaaat
301 ggaacaaggt ggagaagcct cgggaatgcc caacattccg aggcttctca ggattgcaga
361 aagagaggga acaaatcaca agcagagggt tggcttctgg tgaggccatt tggtcctcag
421 agacttgaga aaagagagag taagcaaggt gggctacttg gccaaagagc tgagaagggg
481 gtgtgaattt tccttattga catttgttta acttagagaa actgggagct aaatctcagc
541 taaagtagaa atgtcttaaa gctcaagagg agaagtgaaa ttttgcatta agattagtga
601 agactgagcc aggctccact aaaggaagag atatgatgtt cagtaactta gagcagagtt
661 atgcaactgg agaataggaa tctgctattg tgcctgtagg tacatttagt atcaggcaac
721 taacaggtaa ttcatagtgc ctataataaa gatattcata taacaaaaag tgtgaaggta
781 ggctatttca ggttaggtgc aatagcttaa ccatggtatc aaaggtctag ccccctgccc
841 tccttctagt ccccctccct cacccccacc ccactttctt agctcactct tttttcccat
901 ttctcactcc catttccttc cctcacaata ttgggcttaa tgcactgtgg ttcttagagt
961 ttagatgtca acagtagaaa gactcagtgt gatcaaggaa tgtcactgaa gttatggatg
1021 tcagggaact ttaagatgga tgtgttgaat acatgcagac actgaagaca ccctggatga
1081 taaacacttt acataaagaa atgtatgtag tgtaaattat attaaaatat actcttcatg
1141 cttcttaaat gtctttgaaa acttgactag tttaccaaca gaacactaat aaattaaatg
1201 cacatgtcta aaaattaaaa actttgtgta aaataatact tttcagttgg gtgcagtggc
1261 tcatgcttgt aatcccagca ctttgggagg ccgaggtgag tggatcacga ggtcaggagt
1321 ttgagaccag cctggccaac acagtgaaac cctgtctcta ctaaaaatac aaaaattagt
1381 tgggcatggt ggcacgtgcc tgtagtccca gctactcggg aggctgaggc aggagaattg
1441 cttgaacctg ggaggcagag gtggcagtga gctgaaatca tgccactgca ctccagcctg
1501 ggtgacagag ctagactctg tctcaaaaaa aaaaaaaaac aaaacaaaac ttttcatctt
1561 tgtaacttta gcttacttcc ttgtaaaccc cataaaaatc agtccaagtg caatgagttg
1621 agtttcattt gtttttcccc agagtagtat gtccatcaga tgaatgtaga actagcaggg
1681 gctaagtcct tccatgttca gaaattctgt gagagatgtc agaagacctg gtaaataata
1741 accttttttt cttgttcaga ttcagaacca attgacaggg atgcaggagt aaaatagatg
1801 gttctggaaa cctcagtttc ttactgacag aagttagact ggataaaaac ggcttaaagg
1861 cagagctaaa taggcttgta ctggcagagg aggagtgtag cagatgtccc tctgcatagg
1921 tcttctcaat gcaacttggg gcaccaagga gcatgggatg tctgcatcct gctcctaaag
1981 aggacagagg gaggagtgta ccaaggatac tcagttattt ctcccaggct caacagttag
2041 ttccatcctg aggagtgagt gagaggtgga gagtggctag aaatgtttaa tctagccaaa
2101 gtcctcccca tggaaactta agagaaataa gtaagtatcc ccccacaccc accccaagcc
2161 ccaaaagatt taagcttcag cagatttatc atgtgtgaga gaatatgatt gaggattttt
2221 ataacatgtt ctttttttct ttcccagaga gtgtgcaccc cagattcctt gtagtactcc
2281 tattgctact gaaaggacag ttgcacattt gaacactctg aaggaccgtc acccaggtga
2341 tttgtgggcc cgcatgcaca tctcatccct ggaatatgct gcaggagaca ttacccgaaa
2401 agggagaaaa aaagacaaag ctcgagtgag tgaactgctc caaggcctct cattctctgg
2461 tgactcagat gtggaaaaag ataatgagcc tgagatccag cctgctcaaa agaagttaaa
2521 ggtatcatgt ttcccagaaa agagttggac caaaagagac attaaaccca attttccaag
2581 ctggtcagca ctggattctg gacttttgaa tctcaagagc gaaaagttga acccagtaga
2641 gctttttgaa ttattttttg atgatgaaac attcaactta attgtcaatg aaaccaataa
2701 ttatgcttct cagaaaaatg tcagcttgga agtcacagtt caggaaatga ggtgtgtgtt
2761 tggtgtctta cttttgagtg gatttatgag gcatcctaga agggaaatgt attgggaagt
2821 ctctgacacc gatcagaacc tggttagaga tgcaatcaga agggacagat ttgaattgat
2881 tttctcaaac ctgcactttg cagataatgg ccacctagat caaaaagata agtttacaaa
2941 gttgagacct ctcataaaac aaatgaataa aaatttcctc ttgtatgcaa aaaaaaaaaa
3001 aaaaa
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