LOCUS BC111018 2495 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens translin-associated factor X interacting protein 1,
mRNA (cDNA clone MGC:111443 IMAGE:5168384), complete cds.
ACCESSION BC111018
VERSION BC111018.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2495)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2495)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-DEC-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 233 Row: b Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 8923845.
FEATURES Location/Qualifiers
source 1..2495
/db_xref="H-InvDB:HIT000339841"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:111443 IMAGE:5168384"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2495
/gene="TSNAXIP1"
/gene_synonym="TXI1"
/db_xref="GeneID:55815"
/db_xref="HGNC:HGNC:18586"
/db_xref="MIM:607720"
CDS 378..2354
/gene="TSNAXIP1"
/gene_synonym="TXI1"
/codon_start=1
/product="translin-associated factor X interacting protein
1"
/protein_id="AAI11019.1"
/db_xref="GeneID:55815"
/db_xref="HGNC:HGNC:18586"
/db_xref="MIM:607720"
/translation="MGGHLSPWPTYTSGQTILQNRKPCSDDYRKRVGSCQQHPFRTAK
PQYLEELENYLRKELLLLDLGTDSTQELRLQPYREIFEFFIEDFKTYKPLLSSIKNAY
EGMLAHQREKIRALEPLKAKLVTVNEDCNERILAMRAEEKYEISLLKKEKMNLLKLID
KKNEEKISLQSEVTKLRKNLAEEYLHYLSERDACKILIADLNELRYQREDMSLAQSPG
IWGEDPVKLTLALKMTRQDLTRTQMELNNMKANFGDVVPRRDFEMQEKTNKDLQEQLD
TLRASYEEVRKEHEILMQLHMSTLKERDQFFSELQEIQRTSTPRPDWTKCKDVVAGGP
ERWQMLAEGKNSDQLVDVLLEEIGSGLLREKDFFPGLGYGEAIPAFLRFDGLVENKKP
SKKDVVNLLKDAWKERLAEEQKETFPDFFFNFLEHRFGPSDAMAWAYTIFENIKIFHS
NEVMSQFYAVLMGKRSENVYVTQKETVAQLLKEMTNADSQNEGLLTMEQFNTVLKSTF
PLKTEEQIQELMEAGGWHPSSSNADLLNYRSLFMEDEEGQSEPFVQKLWEQYMDEKDE
YLQQLKQELGIELHEEVTLPKLRGGLMTIDPSLDKQTVNTYMSQAFQLPESEMPEEGD
EKEEAVVEILQTALERLQVIDIRRVGPREPEPAS"
BASE COUNT 717 a 607 c 698 g 473 t
ORIGIN
1 gctgattgcc cgcctgcccg tgggtcatgg cctgccagca gtcgcggtac cacagcttct
61 cgtccgcgtc gaggtaggcg ctggcaggga tgagggcaga gatgagggtt tgagtacttc
121 tagagaggga aatggcactt gatccggacc tctgcacctc ctgctggcct ctgaccattg
181 atctagggct ccagcaccac agagtcaatg gttagaatcg ggctgattta gcccagtgaa
241 gacgttacgt gctagcaaaa cgattacagc cacggccttc aggagtgacc atagacgaat
301 cctttctcac agaagacaag agcacccaga atcgcaagct tcttcagaaa cgaaggacgc
361 tgactggtca gttctccatg ggtgggcacc tgtccccatg gcccacatac accagtggcc
421 agaccatttt gcaaaatcga aaaccctgtt cagatgacta ccggaagcga gtagggagct
481 gccagcagca cccctttcgc actgccaagc cccagtactt ggaggaactg gaaaactacc
541 tacgcaagga gctcctcctg ctggacctgg gcacagattc cacccaggaa ctaaggctgc
601 agccttacag agagatcttt gagttcttca tagaggactt caaaacgtac aagccattac
661 tatcctccat caagaatgcg tatgagggga tgctggccca ccaaagggag aagattcggg
721 ctctggagcc cctgaaggcc aagcttgtca ctgtgaatga ggactgcaat gagaggatcc
781 tggccatgag agctgaggag aaatatgaaa tctccctgct caagaaagag aagatgaact
841 tgctaaaact catcgacaaa aagaatgagg agaagatttc attgcagagc gaggtgacca
901 aactgaggaa gaacttggct gaggagtacc tgcactacct cagtgagcga gatgcctgta
961 agatcctcat cgcagacctg aatgagctgc ggtaccagcg ggaggacatg tcattagccc
1021 agtcgccagg catctggggg gaggaccctg tgaagttaac cctggctctt aagatgaccc
1081 ggcaagacct gacccgcacg cagatggaac tcaacaacat gaaggccaac tttggagatg
1141 tggtccccag gagggacttt gaaatgcagg agaagaccaa caaggatctt caggagcagc
1201 tggacaccct gagagccagc tacgaggagg ttcgcaagga gcatgagatc ctcatgcagc
1261 tgcacatgag cacgctgaag gaacgggacc aattcttctc tgagctgcag gagatccagc
1321 gcacttccac gccgcggcct gactggacca agtgcaaaga tgtggtggct gggggcccag
1381 agcgctggca gatgctggct gagggcaaga acagcgacca gctggtggac gtgctcctgg
1441 aagagattgg ttcggggctg ctgcgggaga aagacttctt ccctggtctg ggctatgggg
1501 aagccatccc tgcttttctt cggtttgatg gcctcgtgga gaacaagaag ccaagcaaga
1561 aggacgtggt caacctcctc aaggatgcct ggaaggaacg tcttgctgag gagcagaaag
1621 agacgttccc agatttcttc ttcaatttcc tggagcatcg ctttgggccc agtgatgcca
1681 tggcctgggc ttatactatt tttgaaaata tcaagatctt ccactccaac gaggttatga
1741 gtcagttcta tgcagtcttg atgggaaagc ggagtgagaa tgtgtatgtc acccagaagg
1801 agacagtagc ccagctgctg aaggagatga caaatgctga cagtcagaac gaggggctac
1861 taaccatgga gcagttcaac actgtcctca agagtacctt ccctctcaag acagaagagc
1921 aaatccagga gctgatggag gcagggggct ggcatcccag cagcagcaat gcagacttgc
1981 tcaactaccg ctcactgttt atggaggatg aggagggcca gagtgagccc tttgtgcaaa
2041 aactctggga acaatacatg gatgagaagg acgagtactt acagcagcta aagcaggagc
2101 ttggcataga actccatgag gaagtgactc tgcccaagct gcgagggggc ctgatgacca
2161 tcgaccccag cctggacaag cagacagtga acacctacat gagccaggcc ttccagctcc
2221 ctgagtcgga aatgccagag gagggtgacg agaaggaaga agccgtggtg gaaatcctcc
2281 agactgccct ggagcggctt caggtgattg acatcaggcg tgtgggacct cgagagccag
2341 agcctgcaag ctaggaactt gtgggcagcc tgcgtactcc agtcctgcta acccctagct
2401 tttaatataa aagtgtttgt ctgaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2461 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
//