LOCUS       BC111007                1337 bp    mRNA    linear   HUM 11-APR-2007
DEFINITION  Homo sapiens caprin family member 2, mRNA (cDNA clone
            IMAGE:5770001), complete cds.
ACCESSION   BC111007
VERSION     BC111007.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1337)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1337)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-DEC-2005) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Life Technologies, Inc.
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: National Institutes of Health Intramural
            Sequencing Center (NISC),
            Gaithersburg, Maryland;
            Web site: http://www.nisc.nih.gov/
            Contact: nisc_mgc@nhgri.nih.gov
            Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
            Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
            Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
            Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
            Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
            McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
            Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
            Young,A., Zhang,L.-H. and Green,E.D.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 233 Row: p Column: 7
            This clone has the following problem: The cds is short compared to
            the longest cds in the locus.
FEATURES             Location/Qualifiers
     source          1..1337
                     /db_xref="H-InvDB:HIT000339830"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="IMAGE:5770001"
                     /tissue_type="Brain, fetal, whole pooled"
                     /clone_lib="NIH_MGC_121"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            1..1337
                     /gene="CAPRIN2"
                     /gene_synonym="caprin-2"
                     /gene_synonym="EEG-1"
                     /gene_synonym="EEG1"
                     /db_xref="GeneID:65981"
                     /db_xref="HGNC:HGNC:21259"
                     /db_xref="MIM:610375"
     CDS             463..939
                     /gene="CAPRIN2"
                     /gene_synonym="caprin-2"
                     /gene_synonym="EEG-1"
                     /gene_synonym="EEG1"
                     /codon_start=1
                     /product="CAPRIN2 protein"
                     /protein_id="AAI11008.1"
                     /db_xref="GeneID:65981"
                     /db_xref="HGNC:HGNC:21259"
                     /db_xref="MIM:610375"
                     /translation="MTPVDVPVTNPAATILPVHVYPLPQQMRVAFSAARTSNLAPGTL
                     DQPIVFDLLLNNLGETFDLQLGRFNCPVNGTYVFIFHMLKLAVNVPLYVNLMKNEEVL
                     VSAYANDGAPDHETASNHAILQLFQGDQIWLRLHRGAIYGSSWKYSTFSGYLLYQD"
BASE COUNT          408 a          271 c          284 g          374 t
ORIGIN      
        1 tattcaagta agcaatggta gccttgcctt ttacccagca cagacgaatg tatttcccag
       61 acctactcag ccatttgtca atagccgggg atctgttaga ggatgtactc gtggtgggag
      121 attaataacc aattcctatc ggtcccctgg tggttataaa ggttttgata cttatagagg
      181 actcccttca atttccaatg gaaattatag ccagctgcag ttccaagcta gagagtattc
      241 tggagcacct tattcccaaa gggataattt ccagcagtgt tataagcgag gagggacatc
      301 tggtggtcca cgagcaaatt cgagagctaa ctgcttcatt atgagaaact cactgttgct
      361 aataaaacag cagggtggag tgattcttct caggtgagca gcccagaaag agacaacgaa
      421 acctttaaca gtggtgactc tggacaagga gactcccgta gcatgacccc tgtggatgtg
      481 ccagtgacaa atccagcagc caccatactg ccagtacacg tctaccctct gcctcagcag
      541 atgcgagttg ccttctcagc agccagaacc tctaatctgg cccctggaac tttagaccaa
      601 cctattgtgt ttgatcttct tctgaacaac ttaggagaaa cttttgatct tcagcttggt
      661 agatttaatt gcccagtgaa tggcacttac gttttcattt ttcacatgct aaagctggca
      721 gtgaatgtgc cactgtatgt caacctcatg aagaatgaag aggtcttggt atcagcctat
      781 gccaatgatg gtgctccaga ccatgaaact gctagcaatc atgcaattct tcagctcttc
      841 cagggagacc agatatggtt acgtctgcac aggggagcaa tttatggaag tagctggaaa
      901 tattctacgt tttcaggcta tcttctttat caagattgaa agtcagtaca gtattgacaa
      961 taaaaggatg gtgttctaat tagtgggatt gaaggaaaag tagtctttgc cctcatgact
     1021 gattggttta ggaaaatgtt tttgttccta gagggaggag gtccttactt ttttgttttc
     1081 cttcctgagg tgaaaaatca agctgaatga caattagcac taatctggca ctttataaat
     1141 tgtgatgtag cctcgctagt caagctgtga atgtatattg tttgcactta atccttaact
     1201 gtattaacgt tcagcttact aaactgactg cctcaagtcc aggcaagtta caatgccttg
     1261 ttgtgcctca ataaaaaagt tacatgcaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
     1321 aaaaaaaaaa aaaaaaa
//