LOCUS BC110884 3620 bp mRNA linear HUM 08-DEC-2005
DEFINITION Homo sapiens F-box protein, helicase, 18, mRNA (cDNA clone
MGC:131916 IMAGE:6147373), complete cds.
ACCESSION BC110884
VERSION BC110884.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3620)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3620)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-DEC-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 255 Row: l Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 30795118.
FEATURES Location/Qualifiers
source 1..3620
/db_xref="H-InvDB:HIT000339775"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:131916 IMAGE:6147373"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3620
/gene="FBXO18"
/gene_synonym="FBH1"
/gene_synonym="Fbx18"
/gene_synonym="FLJ14590"
/db_xref="GeneID:84893"
/db_xref="HGNC:HGNC:13620"
/db_xref="IMGT/GENE-DB:13620"
/db_xref="MIM:607222"
CDS 389..3298
/gene="FBXO18"
/gene_synonym="FBH1"
/gene_synonym="Fbx18"
/gene_synonym="FLJ14590"
/codon_start=1
/product="FBXO18 protein"
/protein_id="AAI10885.1"
/db_xref="GeneID:84893"
/db_xref="HGNC:HGNC:13620"
/db_xref="IMGT/GENE-DB:13620"
/db_xref="MIM:607222"
/translation="MAKSNSVGQDSCQDSEGDMIFPAESSCALPQEGSAGPGSPGSAP
PSRKRSWSSEEESNQATGTSRWDGVSKKAPRHHLSVPCTRPREARQEAEDSTSRLSAE
SGETDQDAGDVGPDPIPDSYYGLLGTLPCQEALSHICSLPSEVLRHVFAFLPVEDLYW
NLSLVCHLWREIISDPLFIPWKKLYHRYLMNEEQAVSKVDGILSNCGIEKESDLCVLN
LIRYTATTKCSPSVDPERVLWSLRDHPLLPEAEACVRQHLPDLYAAAGGVNIWALVAA
VVLLSSSVNDIQRLLFCLRRPSSTVTMPDVTETLYCIAVLLYAMREKGINISNRIHYN
IFYCLYLQENSCTQATKVKEEPSVWPGKKTIQLTHEQQLILNHKMEPLQVVKIMAFAG
TGKTSTLVKYAEKWSQSRFLYVTFNKSIAKQAERVFPSNVICKTFHSMAYGHIGRKYQ
SKKKLNLFKLTPFMVNSVLAEGKGGFIRAKLVCKTLENFFASADEELTIDHVPIWCKN
SQGQRVMVEQSEKLNGVLEASRLWDNMRKLGECTEEAHQMTHDGYLKLWQLSKPSLAS
FDAIFVDEAQDCTPAIMNIVLSQPCGKIFVGDPHQQIYTFRGAVNALFTVPHTHVFYL
TQSFRFGVEIAYVGATILDVCKRVRKKTLVGGNHQSGIRGDAKGQVALLSRTNANVFD
EAVRVTEGEFPSRIHLIGGIKSFGLDRIIDIWILLQPEEERRKQNLVIKDKFIRRWVH
KEGFSGFKRYVTAAEDKELEAKIAVVEKYNIRIPELVQRIEKCHIEDLDFAEYILGTV
HKAKGLEFDTVHVLDDFVKVPCARHNLPQLPHFRVESFSEDEWNLLYVAVTRAKKRLI
MTKSLENILTLAGEYFLQAELTSNVLKTGVVRCCVGQCNNAIPVDTVLTMKKLPITYS
NRKENKGGYLCHSCAEQRIGPLAFLTASPEQVRAMERTVENIVLPRHEALLFLVF"
BASE COUNT 918 a 907 c 1001 g 794 t
ORIGIN
1 gctgggctga gcggccggcg gcgcgggccc ggcggcggcg gcagcggggt ccgggtccgg
61 agcgccacat ctgtggtccg aagacaaccc tatgaggcat cagtagggtt ttacaggtgg
121 ggaagtggag gcctaaccaa gtcagtgact ttcttacaga attacagtga gacggtttaa
181 gcggaagcat cttactgcca ttgactgcca gcatttggct cggagtcact tggctgtgac
241 ccagcccttc ggtcaaagat ggacaaacag agatccgaac catggtctct atcctaaacc
301 gagaacaaaa agagggagta ggggtcaggg aagtcaaaga tgcatccctg agttcttcct
361 agcaggcaag cagccgtgca ccaatgacat ggccaaaagc aattctgttg gccaggacag
421 ctgtcaggac tctgagggtg acatgatctt tcctgcagag agcagctgtg cactgcctca
481 ggaaggcagt gcagggccgg gctcaccagg gtctgccccg ccctccagga agcggtcttg
541 gtcctctgag gaagagagta accaggctac cgggaccagc cggtgggatg gagtttctaa
601 gaaagctcca cggcaccatt tgtctgtgcc atgcacaagg cctagggagg ccaggcaaga
661 agcagaggac agtacgtctc ggctctctgc ggagtctggt gaaaccgacc aagatgctgg
721 ggacgtgggt cctgatccca ttcctgactc atactatggg cttcttggga ccttgccctg
781 ccaggaagca ctgagccaca tttgcagcct gcctagtgag gtcctgaggc acgtgtttgc
841 cttcctcccg gtggaagacc tctattggaa cctgagcttg gtgtgccact tgtggaggga
901 gatcatcagt gacccgctgt tcattccttg gaagaagctg taccatcgat acctgatgaa
961 tgaagagcaa gctgtcagca aagtggacgg catcctgtct aactgtggca tagaaaagga
1021 gtcagacctg tgtgtgctga acctcatacg atacacagcc accactaagt gctctccgag
1081 tgtggatccc gagagggtgc tgtggagtct gagggaccac cccctcctcc ccgaggctga
1141 ggcgtgtgtg cggcaacacc tccccgacct ctacgctgct gccgggggtg tcaacatctg
1201 ggccctggtg gcggctgtgg tgctcctctc cagcagtgtg aatgacatcc agcgactgct
1261 cttctgcctc cggagaccca gctccacggt gaccatgcca gatgtcaccg agaccctgta
1321 ctgcatagcc gtgcttctct acgccatgag ggagaagggg attaacatca gcaataggat
1381 tcactacaac attttctatt gcctatatct tcaggagaat tcctgcactc aggccacaaa
1441 agttaaagag gagccatctg tctggccagg caagaaaacc atccaactta cacatgaaca
1501 acagctgatt ctgaatcaca agatggaacc tctccaggtg gtgaaaatta tggcctttgc
1561 cggcactggg aagacctcaa cgctggtcaa gtatgcagag aagtggtctc agagcaggtt
1621 tctgtatgtg acattcaaca agagcatcgc aaagcaggcc gaacgcgtct tccccagcaa
1681 cgtcatctgc aaaaccttcc actccatggc ctacgggcac atagggcgga agtaccagtc
1741 aaagaagaag ttgaatctct tcaagttaac acccttcatg gtcaactccg tccttgctga
1801 agggaagggt ggattcataa gagccaagct tgtgtgtaag actctagaaa acttctttgc
1861 ctcggctgac gaagagctga ccattgatca cgtgcctatt tggtgtaaga acagccaagg
1921 acagagagtc atggttgagc agagtgaaaa actgaatggt gtccttgaag cgagccgcct
1981 ctgggataac atgcggaagc tgggggagtg cacagaagag gcgcaccaga tgactcatga
2041 cggctacttg aaactctggc agctgagcaa gccttcgctg gcctcttttg acgccatctt
2101 tgtggatgag gcccaggact gcacaccagc tatcatgaac atagttctgt ctcagccatg
2161 tgggaaaatc tttgtagggg acccgcacca gcagatctat accttccggg gtgcggtcaa
2221 cgccctgttc acagtgcccc acacccacgt cttctatctc acgcagagtt ttcggtttgg
2281 tgtggaaata gcttatgtgg gagctactat cttggatgtt tgcaagagag tcaggaaaaa
2341 gactttggtt ggaggaaacc atcagagtgg cattagaggt gacgcaaagg ggcaagtggc
2401 cttgttgtcc cggaccaacg ccaacgtgtt tgatgaggcc gtacgggtga cggaagggga
2461 attcccttca aggatacatt tgattggggg gattaaatca tttggattgg acagaatcat
2521 tgatatttgg atccttcttc agccagagga agaacggagg aaacaaaacc tcgtcattaa
2581 agacaaattt atcagaagat gggtgcacaa agaaggcttt agtggcttca agaggtatgt
2641 gaccgctgcc gaggacaagg agcttgaagc caagatcgca gttgttgaaa agtataacat
2701 caggattcca gagctggtgc aaaggataga aaaatgccat atagaagatt tggactttgc
2761 agagtacatt ctgggcactg tgcacaaagc caaaggcctg gagtttgaca ctgtgcatgt
2821 tttggatgat tttgtgaaag tgccttgtgc ccggcataac ctgccccagc ttccgcactt
2881 cagagttgag tcattttctg aggatgaatg gaatttactg tatgttgcag taactcgagc
2941 caagaagcgt ctcatcatga ccaaatcatt ggaaaacatt ttgactttgg ctggggagta
3001 cttcttgcaa gcagagctga caagcaacgt cttaaaaaca ggcgtggtgc gctgctgcgt
3061 gggacagtgc aacaatgcca tccctgttga caccgtcctt accatgaaga agctgcccat
3121 cacctatagc aacaggaagg aaaacaaggg gggctacctc tgccactcct gtgcggagca
3181 gcgcatcggg cccctggcgt tcctgacagc ctccccggag caggtgcgcg ccatggagcg
3241 cactgtggag aacatcgtac tgccccggca tgaggccctg ctcttcctcg tcttctgagg
3301 acaaggcgca cgttctccgc agtgcagagc agcttgccga ggaccccgcg tgaagaaagc
3361 cagcgagggg ggcttctgct ccctgagact ctgggttcac ccacagcact ttctgaggaa
3421 gaggacacca gcccaagctg gacctgccat ttctccactc cctacagaca gccagtctcc
3481 acttgcctcc cctctggatg tatctggtca gggaagtggg ggatgttctt ttgataaaaa
3541 aaaaaaattt tatgtattta aacttttatt acaagatttc aattaaacag gcaccatagc
3601 actggcaaaa aaaaaaaaaa
//