LOCUS BC110861 2726 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens heat shock 70kDa protein 4, mRNA (cDNA clone
MGC:131852 IMAGE:6169048), complete cds.
ACCESSION BC110861
VERSION BC110861.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2726)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2726)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-DEC-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 255 Row: n Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38327038.
FEATURES Location/Qualifiers
source 1..2726
/db_xref="H-InvDB:HIT000339752"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:131852 IMAGE:6169048"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2726
/gene="HSPA4"
/gene_synonym="APG-2"
/gene_synonym="HS24/P52"
/gene_synonym="hsp70"
/gene_synonym="hsp70RY"
/gene_synonym="RY"
/db_xref="GeneID:3308"
/db_xref="HGNC:HGNC:5237"
/db_xref="MIM:601113"
CDS 142..2664
/gene="HSPA4"
/gene_synonym="APG-2"
/gene_synonym="HS24/P52"
/gene_synonym="hsp70"
/gene_synonym="hsp70RY"
/gene_synonym="RY"
/codon_start=1
/product="heat shock 70kDa protein 4"
/protein_id="AAI10862.1"
/db_xref="GeneID:3308"
/db_xref="HGNC:HGNC:5237"
/db_xref="MIM:601113"
/translation="MSVVGIDLGFQSCYVAVARAGGIETIANEYSDRCTPACISFGPK
NRSIGAAAKSQVISNAKNTVQGFKRFHGRAFSDPFVEAEKSNLAYDIVQLPTGLTGIK
VTYMEEERNFTTEQVTAMLLSKLKETAESVLKKPVVDCVVSVPCFYTDAERRSVMDAT
QIAGLNCLRLMNETTAVALAYGIYKQDLPALEEKPRNVVFVDMGHSAYQVSVCAFNRG
KLKVLATAFDTTLGGRKFDEVLVNHFCEEFGKKYKLDIKSKIRALLRLSQECEKLKKL
MSANASDLPLSIECFMNDVDVSGTMNRGKFLEMCNDLLARVEPPLRSVLEQTKLKKED
IYAVEIVGGATRIPAVKEKISKFFGKELSTTLNADEAVTRGCALQCAILSPAFKVREF
SITDVVPYPISLRWNSPAEEGSSDCEVFSKNHAAPFSKVLTFYRKEPFTLEAYYSSPQ
DLPYPDPAIAQFSVQKVTPQSDGSSSKVKVKVRVNVHGIFSVSSASLVEVHKSEENEE
PMETDQNAKEEEKMQVDQEEPHVEEQQQQTPAENKAESEEMETSQAGSKDKKMDQPPQ
AKKAKVKTSTVDLPIENQLLWQIDREMLNLYIENEGKMIMQDKLEKERNDAKNAVEEY
VYEMRDKLSGEYEKFVSEDDRNSFTLKLEDTENWLYEDGEDQPKQVYVDKLAELKNLG
QPIKIRFQESEERPKLFEELGKQIQQYMKIISSFKNKEDQYDHLDAADMTKVEKSTNE
AMEWMNNKLNLQNKQSLTMDPVVKSKEIEAKIKELTSTCSPIISKPKPKVEPPKEEQK
NAEQNGPVDGQGDNPGPQAAEQGTDTAVPSDSDKKLPEMDID"
BASE COUNT 888 a 518 c 658 g 662 t
ORIGIN
1 cggacgcgtg ggcgtggaca ccgcaagccc ctcagtagcc tcggcccaag aggcctgctt
61 tccactcgct agccccgccg ggggtccgtg tcctgtctcg gtggccggac ccgggcccga
121 gcccgagcag tagccggcgc catgtcggtg gtgggcatag acctgggctt ccagagctgc
181 tacgtcgctg tggcccgcgc cggcggcatc gagactatcg ctaatgagta tagcgaccgc
241 tgcacgccgg cttgcatttc ttttggtcct aagaatcgtt caattggagc agcagctaaa
301 agccaggtaa tttctaatgc aaagaacaca gtccaaggat ttaaaagatt ccatggccga
361 gcattctctg atccatttgt ggaggcagaa aaatctaacc ttgcatatga tattgtgcag
421 ttgcctacag gattaacagg tataaaggtg acatatatgg aggaagagcg aaattttacc
481 actgagcaag tgactgccat gcttttgtcc aaactgaagg agacagccga aagtgttctt
541 aagaagcctg tagttgactg tgttgtttcg gttccttgtt tctatactga tgcagaaaga
601 cgatcagtga tggatgcaac acagattgct ggtcttaatt gcttgcgatt aatgaatgaa
661 accactgcag ttgctcttgc atatggaatc tataagcagg atcttcctgc cttagaagag
721 aaaccaagaa atgtagtttt tgtagacatg ggccactctg cttatcaagt ttctgtatgt
781 gcatttaata gaggaaaact gaaagttctg gccactgcat ttgacacgac attgggaggt
841 agaaaatttg atgaagtgtt agtaaatcac ttctgtgaag aatttgggaa gaaatacaag
901 ctagacatta agtccaaaat ccgtgcatta ttacgactct ctcaggagtg tgagaaactc
961 aagaaattga tgagtgcaaa tgcttcagat ctccctttga gcattgaatg ttttatgaat
1021 gatgttgatg tatctggaac tatgaataga ggcaaatttc tggagatgtg caatgatctc
1081 ttagctagag tggagccacc acttcgtagt gttttggaac aaaccaagtt aaagaaagaa
1141 gatatttatg cagtggagat agttggtggt gctacacgaa tccctgcggt aaaagagaag
1201 atcagcaaat ttttcggtaa agaacttagt acaacattaa atgctgatga agctgtcact
1261 cgaggctgtg cattgcagtg tgccatctta tcgcctgctt tcaaagtcag agaattttct
1321 atcactgatg tagtaccata tccaatatct ctgagatgga attctccagc tgaagaaggg
1381 tcaagtgact gtgaagtctt ttccaaaaat catgctgctc ctttctctaa agttcttaca
1441 ttttatagaa aggaaccttt cactcttgag gcctactaca gctctcctca ggatttgccc
1501 tatccagatc ctgctatagc tcagttttca gttcagaaag tcactcctca gtctgatggc
1561 tccagttcaa aagtgaaagt caaagttcga gtaaatgtcc atggcatttt cagtgtgtcc
1621 agtgcatctt tagtggaggt tcacaagtct gaggaaaatg aggagccaat ggaaacagat
1681 cagaatgcaa aggaggaaga gaagatgcaa gtggaccagg aggaaccaca tgttgaagag
1741 caacagcagc agacaccagc agaaaataag gcagagtctg aagaaatgga gacctctcaa
1801 gctggatcca aggataaaaa gatggaccaa ccaccccaag ccaagaaggc aaaagtgaag
1861 accagtactg tggacctgcc aatcgagaat cagctattat ggcagataga cagagagatg
1921 ctcaacttgt acattgaaaa tgagggtaag atgatcatgc aggataaact ggagaaggag
1981 cggaatgatg ctaagaacgc agtggaggaa tatgtgtatg aaatgagaga caagcttagt
2041 ggtgaatatg agaagtttgt gagtgaagat gatcgtaaca gttttacttt gaaactggaa
2101 gatactgaaa attggttgta tgaggatgga gaagaccagc caaagcaagt ttatgttgat
2161 aagttggctg aattaaaaaa tctaggtcaa cctattaaga tacgtttcca ggaatctgaa
2221 gaacgaccaa aattatttga agaactaggg aaacagatcc aacagtatat gaaaataatc
2281 agctctttca aaaacaagga ggaccagtat gatcatttgg atgctgctga catgacaaag
2341 gtagaaaaaa gcacaaatga agcaatggag tggatgaata acaagctaaa tctgcagaac
2401 aagcagagtt tgaccatgga tccagttgtc aagtcaaaag agattgaagc taaaattaag
2461 gagctgacaa gtacttgtag ccctataatt tcaaagccca aacccaaagt ggaacctcca
2521 aaagaggaac aaaaaaatgc agagcagaat ggaccagtgg atggacaagg agacaaccca
2581 ggcccccagg ctgctgagca gggtacagac acagctgtgc cttcggattc agacaagaag
2641 cttcctgaaa tggacattga ttgattccaa cacttgtttc tattaaaaca gactattata
2701 aaaaaaaaaa aaaaaaaaaa aaaaaa
//