LOCUS BC110851 4216 bp mRNA linear HUM 21-JUL-2006 DEFINITION Homo sapiens TSR1, 20S rRNA accumulation, homolog (S. cerevisiae), mRNA (cDNA clone MGC:131829 IMAGE:5786818), complete cds. ACCESSION BC110851 VERSION BC110851.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4216) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4216) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (07-DEC-2005) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Lou Staudt cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 255 Row: j Column: 19 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 39780587. FEATURES Location/Qualifiers source 1..4216 /db_xref="H-InvDB:HIT000339742" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:131829 IMAGE:5786818" /tissue_type="Lymph, lymphoma" /clone_lib="NIH_MGC_85" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..4216 /gene="TSR1" /gene_synonym="FLJ10534" /gene_synonym="KIAA1401" /db_xref="GeneID:55720" /db_xref="HGNC:HGNC:25542" CDS 536..2950 /gene="TSR1" /gene_synonym="FLJ10534" /gene_synonym="KIAA1401" /codon_start=1 /product="TSR1, 20S rRNA accumulation, homolog (S. cerevisiae)" /protein_id="AAI10852.1" /db_xref="GeneID:55720" /db_xref="HGNC:HGNC:25542" /translation="MAAHRPGPLKQQNKAHKGGRHRGRGSAQRDGKGRLALKTLSKKV RKELSRVDQRHRASQLRKQKKEAVLAEKRQLGGKDGPPHQVLVVPLHSRISLPEAMQL LQDRDTGTVHLNELGNTQNFMLLCPRLKHRWFFTSARPGDLHVVLDMAKVADTILFLL DPLEGWDSTGDYCLSCLFAQGLPTYTLAVQGISGLPLKKQIDTRKKLSKAVEKRFPHD KLLLLDTQQEAGMLLRQLANQKQQHLAFRDRRAYLFAHAVDFVPSEENNLVGTLKISG YVRGQTLNVNRLLHIVGYGDFQMKQIDAPGDPFPLNPRGIKPQKDPDMAMEICATDAV DDMEEGLKVLMKADPGRQESLQAEVIPDPMEGEQTWPTEEELSEAKDFLKESSKVVKK VPKGTSSYQAEWILDGGSQSGGEGDEYEYDDMEHEDFMEEESQDESSEEEEEYETMTI GESVHDDLYDKKVDEEAEAKMLEKYKQERLEEMFPDEVDTPRDVAARIRFQKYRGLKS FRTSPWDPKENLPQDYARIFQFQNFTNTRKSIFKEVEEKEVEGAEVGWYVTLHVSEVP VSVVECFRQGTPLIAFSLLPHEQKMSVLNMVVRRDPGNTEPVKAKEELIFHCGFRRFR ASPLFSQHTAADKHKLQRFLTADMALVATVYAPITFPPASVLLFKQKSNGMHSLIATG HLMSVDPDRMVIKRVVLSGHPFKIFTKMAVVRYMFFNREDVLWFKPVELRTKWGRRGH IKEPLGTHGHMKCSFDGKLKSQDTVLMNLYKRVFPKWTYDPYVPEPVPWLKSEISSTV PQGGME" BASE COUNT 1201 a 945 c 1065 g 1005 t ORIGIN 1 gtaacaggga cgggcttgag ctggtacgga accgggcaag gtgagagaag tgtcttccac 61 gcgattccca agcctcgcta gggaatcgag ggagaagaaa ggttgctcag agtgataaag 121 aacatgccgt tgcaaacgga agagcaacgt gcccgaatct aggtgacagg aagggcttag 181 gccttttcgg cacgaatgga gccttccagt caacatgctt ctacgtgatg cagctttata 241 gcgcaaaaaa atgacaatgc aaggggtaca aacagccctg ctagaccaac agcccgagcc 301 tcgacagtct acatccggcg ccttcaagcc cccaaccaca cactgcgaag tgggaaaagt 361 tcccagcgcg gcttggcgaa cccgctaaca cggcgctctc acgagctgct ggaaaagacc 421 ttcgcgagag ggcgcaggga gtcccgctcc ctggagggcc cgcccccttg gaggggaccg 481 gaagcgcttg tcctggcccg gaagcagtgc tgactccgta cacgcgcgct gcggcatggc 541 ggcccaccgc cccggcccgc tcaagcagca gaataaagct cataaaggcg gacggcatcg 601 gggtcgggga tctgcacagc gggacggcaa gggccgtctg gcactgaaaa ccctaagcaa 661 gaaggtgaga aaagaactca gcagagtcga ccagaggcat cgcgccagcc agctccgaaa 721 gcagaagaag gaggcggttc tggcagagaa gagacagctg ggtggcaagg atggccctcc 781 tcatcaggta ctggtggtgc ccctgcacag cagaatttcc ctgccagagg ccatgcagct 841 gcttcaagat agggacactg gaacagtaca cttgaatgaa ttgggaaaca cccagaactt 901 tatgctgctg tgcccccgct tgaaacatcg gtggtttttc acctcagcaa ggccagggga 961 tctgcacgtt gtgttagaca tggctaaagt agctgatacc atcctgttcc tccttgatcc 1021 actagaaggc tgggacagca ccggtgatta ctgtctttcc tgcctctttg ctcagggcct 1081 tccgacctat acactagctg tccaggggat ttctggcctc ccactgaaga aacaaataga 1141 taccaggaag aagctaagta aagcagtgga gaagcgcttt ccgcatgaca aactcctctt 1201 gttagacact caacaggagg cagggatgct gcttaggcag ttggctaacc agaagcaaca 1261 gcatcttgct tttcgagatc ggcgggccta cctatttgcc catgctgttg attttgttcc 1321 tagtgaagag aataacttgg tgggcacctt gaaaatttca ggctatgttc gagggcagac 1381 tctgaatgtc aataggttgc tgcatatcgt tggatatggt gatttccaga tgaaacagat 1441 agatgccccc ggagaccctt tccctttaaa tcctagagga attaaacccc aaaaggaccc 1501 agacatggca atggagattt gtgctacgga tgctgtagat gatatggaag aaggtcttaa 1561 agtcctaatg aaggcagacc ctggtagaca ggaatccttg caagcagagg ttatcccaga 1621 tccaatggag ggagagcaaa cctggcccac tgaggaggag ctgagcgagg caaaggattt 1681 cttgaaggaa agttctaagg tggtaaagaa ggtccccaaa ggaacatcca gttaccaagc 1741 tgaatggatt ttggatggtg gcagccaaag tggtggggaa ggagatgaat atgaatatga 1801 tgatatggaa catgaggatt ttatggagga ggaatctcag gatgagagta gtgaagaaga 1861 ggaagaatat gaaactatga ctattgggga gtctgtgcat gatgatctgt atgataagaa 1921 agtagatgaa gaagctgagg caaaaatgtt ggagaaatat aaacaagaaa gactggaaga 1981 gatgtttcca gatgaagtgg acacgccccg tgatgtggct gctcgaattc gatttcagaa 2041 atacagaggc cttaagagct tccggacatc tccatgggat cctaaggaaa accttcctca 2101 agattatgct cgaatatttc agtttcagaa ctttactaac actaggaaaa gcatctttaa 2161 agaggttgaa gaaaaagagg ttgaaggagc tgaggttggc tggtatgtca cacttcatgt 2221 ctctgaagtc cccgtctcag tggtcgagtg cttcaggcaa ggaacaccct tgattgcatt 2281 ttctttacta cctcatgaac agaagatgtc agtattgaat atggtggtga ggcgtgaccc 2341 tggcaacact gaacctgtga aagccaagga agagctcata tttcactgtg gattcaggcg 2401 cttccgagcc tcacctttat tctctcagca cactgcagcg gacaaacata aattgcagag 2461 attcctgact gctgacatgg ccctggtggc gacagtctat gcgccaatca cttttcctcc 2521 tgcatctgtg ctgcttttca agcaaaaaag caatggaatg cacagcctca ttgctacagg 2581 ccatcttatg tcagtagatc cagacagaat ggtcatcaag agagttgttc tgagtggtca 2641 tcctttcaaa atttttacta agatggcagt agtacgttac atgttcttca acagagagga 2701 tgtgctgtgg tttaaaccag tggaactgag aacgaagtgg ggccggagag gacatatcaa 2761 ggaaccttta ggtacccatg gccacatgaa atgcagcttt gatgggaagc taaaatctca 2821 agacacagta ctgatgaacc tgtataaacg agtcttcccc aaatggactt atgatccata 2881 tgtaccagaa ccagtaccct ggctgaaaag tgagatttct tcaacagtgc ctcaaggggg 2941 catggagtaa tggattcaaa gagattctgt cttaccggtg ccagtcagta ctccagggat 3001 gggaggcaca agttgtgatt gggcaaagtt tattttctat gtcagcctgt cagtccactg 3061 ccccattttg caagactttt ttttagcctt gacaaaatgt ctcagttaag tataaaagtt 3121 tttccactac ttagtccaaa aaaaactatt aaatcttaat gaaatagcca ctctccatta 3181 agaatctgat aactaagagt tgacaatact aggaaacaaa atgtcttcag tatctaaaga 3241 cactgaattc ccaccatttc cttttctgta aattaaacag aaacagactg ataaaaagct 3301 ggcctttcag cctgcttcac ccaagttatg gaggaggtta agtctacatt tccaccactg 3361 agcacaacac aaatgttctt tacttctggg gaaacagttt gaaaatgttg agacagcaca 3421 gcagccactc caacaccagc tgtaggttca atgagtagtt tcatcctctc ccacaccagc 3481 tgggttgcac actgttgata tggaagggag taggaattag tgaaagggga gtctagttgg 3541 tttacctata aagttcagat gagaatacgt gtccagtttg aattttctta tcactgtgta 3601 cacacgcttc ccaaagcttt tctttaattc tgactctgct tctgtcaaga gggttgtcat 3661 taatacatct agggtaccct tccatgtcat gaagttacct agtcaggttc ccgtgggtca 3721 cttgctactc ctaagggaag tttcttctgc ctaagaagtt acaccatgct ttgctatttc 3781 ttttcttgct ggagcctcac cttaatttca tcctctgtga cagtgaagat atcatccaca 3841 aggtccctga taataggcca ggtgttcaag ccaatgctgg atttgacacc atctgctatg 3901 gtttctggag gataaagatt gggcatcagt ttccccttca gcttggactg gtagcagtca 3961 tctgcatttg agggttcagc agcatatacc ttcacactag gtttcagagc ctgggaagag 4021 gaatattaag acatcttaac aacaaaccac aacattgcct gcatgtctaa aagaaaatat 4081 gggcctggtg tggtggctca cacctgtaat cccaacactt tgggagcccg aggcgggtgg 4141 atcagctgag gtcaggagtt caagaccagc ctggccaacc tggtgaaatg cagtgtcaac 4201 taaaaaaaaa aaaaaa //