LOCUS BC110815 3681 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens LIM domain and actin binding 1, mRNA (cDNA clone
MGC:131726 IMAGE:5115521), complete cds.
ACCESSION BC110815
VERSION BC110815.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3681)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3681)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-DEC-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 255 Row: c Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 54792736.
FEATURES Location/Qualifiers
source 1..3681
/db_xref="H-InvDB:HIT000339706"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:131726 IMAGE:5115521"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3681
/gene="LIMA1"
/gene_synonym="EPLIN"
/gene_synonym="SREBP3"
/db_xref="GeneID:51474"
/db_xref="HGNC:HGNC:24636"
/db_xref="MIM:608364"
CDS 112..2391
/gene="LIMA1"
/gene_synonym="EPLIN"
/gene_synonym="SREBP3"
/codon_start=1
/product="LIM domain and actin binding 1"
/protein_id="AAI10816.1"
/db_xref="GeneID:51474"
/db_xref="HGNC:HGNC:24636"
/db_xref="MIM:608364"
/translation="MESSPFNRRQWTSLSLRVTAKELSLVNKNKSSAIVEIFSKYQKA
AEETNMEKKRSNTENLSQHFRKGTLTVLKKKWENPGLGAESHTDSLRNSSTEIRHRAD
HPPAEVTSHAASGAKADQEEQIHPRSRLRSPPEALVQGRYPHIKDGEDLKDHSTESKK
MENCLGESRHEVEKSEISENTDASGKIEKYNVPLNRLKMMFEKGEPTQTKILRAQSRS
ASGRKISENSYSLDDLEIGPGQLSSSTFDSEKNESRRNLELPRLSETSIKDRMAKYQA
AVSKQSSSTNYTNELKASGGEIKIHKMEQKENVPPGPEVCITHQEGEKISANENSLAV
RSTPAEDDSRDSQVKSEVQQPVHPKPLSPDSRASSLSESSPPKAMKKFQAPARETCVE
CQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSKG
NYDEGFGHRPHKDLWASKNENEEILERPAQLANARETPHSPGVEDAPIAKVGVLAASM
EAKASSQQEKEDKPAETKKLRIAWPPPTELGSSGSALEEGIKMSKPKWPPEDEISKPE
VPEDVDLDLKKLRRSSSLKERSRPFTVAASFQSTSVKSPKTVSPPIRKGWSMSEQSEE
SVGGRVAERKQVENAKASKKNGNVGKTTWQNKESKGETGKRSKEGHSLEMENENLVEN
GADSDEDDNSFLKQQSPQEPKSLNWSSFVDNTFAEEFTTQNQKSQDVELWEGEVVKEL
SVEEQIKRNRYYDEDEDEE"
BASE COUNT 1213 a 740 c 815 g 913 t
ORIGIN
1 agcttggtcg cgacaggtgc gctaggtaga gcgccgggac ctgtgacagg gctggtagca
61 gcgcagagga aaggcggctt ttagccaggt atttcagtgt ctgtagacaa gatggaatca
121 tctccattta atagacggca atggacctca ctatcattga gggtaacagc caaagaactt
181 tctcttgtca acaagaacaa gtcatcggct attgtggaaa tattctccaa gtaccagaaa
241 gcagctgaag aaacaaacat ggagaagaag agaagtaaca ccgaaaatct ctcccagcac
301 tttagaaagg ggaccctgac tgtgttaaag aagaagtggg agaacccagg gctgggagca
361 gagtctcaca cagactctct acggaacagc agcactgaga ttaggcacag agcagaccat
421 cctcctgctg aagtgacaag ccacgctgct tctggagcca aagctgacca agaagaacaa
481 atccacccca gatctagact caggtcacct cctgaagccc tcgttcaggg tcgatatccc
541 cacatcaagg acggtgagga tcttaaagac cactcaacag aaagtaaaaa aatggaaaat
601 tgtctaggag aatccaggca tgaagtagaa aaatcagaaa tcagtgaaaa cacagatgct
661 tcgggcaaaa tagagaaata taatgttccg ctgaacaggc ttaagatgat gtttgagaaa
721 ggtgaaccaa ctcaaactaa gattctccgg gcccaaagcc gaagtgcaag tggaaggaag
781 atctctgaaa acagctattc tctagatgac ctggaaatag gcccaggtca gttgtcatct
841 tctacatttg actcggagaa aaatgagagt agacgaaatc tggaacttcc acgcctctca
901 gaaacctcta taaaggatcg aatggccaag taccaggcag ctgtgtccaa acaaagcagc
961 tcaaccaact atacaaatga gctgaaagcc agtggtggcg aaatcaaaat tcataaaatg
1021 gagcaaaagg agaatgtgcc cccaggtcct gaggtctgca tcacccatca ggaaggggaa
1081 aagatttctg caaatgagaa tagcctggca gtccgttcca cccctgccga agatgactcc
1141 cgtgactccc aggttaagag tgaggttcaa cagcctgtcc atcccaagcc actaagtcca
1201 gattccagag cctccagtct ttctgaaagt tctcctccca aagcaatgaa gaagtttcag
1261 gcacctgcaa gagagacctg cgtggaatgt cagaagacag tctatccaat ggagcgtctc
1321 ttggccaacc agcaggtgtt tcacatcagc tgcttccgtt gctcctattg caacaacaaa
1381 ctcagtctag gaacatatgc atctttacat ggaagaatct attgtaagcc tcacttcaat
1441 caactcttta aatctaaggg caactatgat gaaggctttg ggcacagacc acacaaggat
1501 ctatgggcaa gcaaaaatga aaacgaagag attttggaga gaccagccca gcttgcaaat
1561 gcaagggaga cccctcacag cccaggggta gaagatgccc ctattgctaa ggtgggtgtc
1621 ctggctgcaa gtatggaagc caaggcctcc tctcagcagg agaaggaaga caagccagct
1681 gaaaccaaga agctgaggat cgcctggcca ccccccactg aacttggaag ttcaggaagt
1741 gccttggagg aagggatcaa aatgtcaaag cccaaatggc ctcctgaaga cgaaatcagc
1801 aagcccgaag ttcctgagga tgtcgatcta gatctgaaga agctaagacg atcttcttca
1861 ctgaaggaaa gaagccgccc attcactgta gcagcttcat ttcaaagcac ctctgtcaag
1921 agcccaaaaa ctgtgtcccc acctatcagg aaaggctgga gcatgtcaga gcagagtgaa
1981 gagtctgtgg gtggaagagt tgcagaaagg aaacaagtgg aaaatgccaa ggcttctaag
2041 aagaatggga atgtgggaaa aacaacctgg caaaacaaag aatctaaagg agagacaggg
2101 aagagaagta aggaaggtca tagtttggag atggagaatg agaatcttgt agaaaatggt
2161 gcagactccg atgaagatga taacagcttc ctcaaacaac aatctccaca agaacccaag
2221 tctctgaatt ggtcgagttt tgtagacaac acctttgctg aagaattcac tactcagaat
2281 cagaaatccc aggatgtgga actctgggag ggagaagtgg tcaaagagct ctctgtggaa
2341 gaacagataa agagaaatcg gtattatgat gaggatgagg atgaagagtg acaaattgca
2401 atgatgctgg gccttaaatt catgttagtg ttagcgagcc actgcccttt gtcaaaatgt
2461 gatgcacata agcaggtatc ccagcatgaa atgtaattta cttggaagta actttggaaa
2521 agaattcctt cttaaaatca aaaacaaaac aaaaaaacac aaaaaacaca ttctaaatac
2581 tagagataac tttacttaaa ttcttcattt tagcagtgat gatatgcata agtgctgtaa
2641 ggcttgtaac tggggaaata ttccacctga taatagccca gattctactg tattcccaaa
2701 aggcaatatt aaggtagaca gatgattagt agtatattgt tacacactat tttggaatta
2761 gagaacatac agaaggaatt taggggctta aacattacga ctgaatgcac tttagtataa
2821 agggcacagt ttgtatattt ttaaatgaat accaatttaa ttttttagta tttacctgtt
2881 aagagattat ttagtcttta aattttttag gttaattttc ttgctgtgat atatatgagg
2941 aatttactac tttatgtcct gctctctaaa ctacatcctg aactcgacgt cctgaggtat
3001 aatacaacag agcacttttt gaggcaattg aaaaaccaac ctacactctt cggtgcttag
3061 agagatctgc tgtctcccaa ataagctttt gtatctgcca gtgaatttac cgtactccaa
3121 atgattgctt tcttttctgg tgatatctgt gcttctcata attactgaaa gctgcaatat
3181 tttagtaata ccttcgggat cactgtcccc catcttccgt gttagagcaa agtgaagagt
3241 ttaaaggagg aagaagaaag aactgtctta caccacttga gctcagacct ctaaaccctg
3301 tatttccctt atgatgtccc ctttttgaga cactaatttt taaatactta ctagctctga
3361 aatatattga tttttatcac agtattctca gggtgaaatt aaaccaacta taggcctttt
3421 tcttgggatg attttctagt cttaaggttt ggggacatta taaacttgag tacatttgtt
3481 gtacacagtt gatattccaa attgtatgga tgggagggag aggtgtctta agctgtaggc
3541 ttttctttgt actgcattta tagagattta gctttaatat tttttagaga tgtaaaacat
3601 tctgctttct tagtcttacc tagtctgaaa catttttatt caataaagat tttaattaaa
3661 atttgaaaaa aaaaaaaaaa a
//