LOCUS BC110656 2830 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens transmembrane 9 superfamily member 2, mRNA (cDNA clone
MGC:117391 IMAGE:3855486), complete cds.
ACCESSION BC110656
VERSION BC110656.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2830)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2830)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-DEC-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 217 Row: f Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4758873.
FEATURES Location/Qualifiers
source 1..2830
/db_xref="H-InvDB:HIT000339679"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:117391 IMAGE:3855486"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_65"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2830
/gene="TM9SF2"
/gene_synonym="P76"
/db_xref="GeneID:9375"
/db_xref="HGNC:HGNC:11865"
/db_xref="MIM:604678"
CDS 191..2182
/gene="TM9SF2"
/gene_synonym="P76"
/codon_start=1
/product="transmembrane 9 superfamily member 2"
/protein_id="AAI10657.1"
/db_xref="GeneID:9375"
/db_xref="HGNC:HGNC:11865"
/db_xref="MIM:604678"
/translation="MSARLPVLSPPRWPRLLLLSLLLLGAVPGPRRSGAFYLPGLAPV
NFCDEEKKSDECKAEIELFVNRLDSVESVLPYEYTAFDFCQASEGKRPSENLGQVLFG
ERIEPSPYKFTFNKKETCKLVCTKTYHTEKAEDKQKLEFLKKSMLLNYQHHWIVDNMP
VTWCYDVEDGQRFCNPGFPIGCYITDKGHAKDACVISSDFHERDTFYIFNHVDIKIYY
HVVETGSMGARLVAAKLEPKSFKHTHIDKPDCSGPPMDISNKASGEIKIAYTYSVSFE
EDDKIRWASRWDYILESMPHTHIQWFSIMNSLVIVLFLSGMVAMIMLRTLHKDIARYN
QMDSTEDAQEEFGWKLVHGDIFRPPRKGMLLSVFLGSGTQILIMTFVTLFFACLGFLS
PANRGALMTCAVVLWVLLGTPAGYVAARFYKSFGGEKWKTNVLLTSFLCPGIVFADFF
IMNLILWGEGSSAAIPFGTLVAILALWFCISVPLTFIGAYFGFKKNAIEHPVRTNQIP
RQIPEQSFYTKPLPGIIMGGILPFGCIFIQLFFILNSIWSHQMYYMFGFLFLVFIILV
ITCSEATILLCYFHLCAEDYHWQWRSFLTSGFTAVYFLIYAVHYFFSKLQITGTASTI
LYFGYTMIMVLIFFLFTGTIGFFACFWFVTKIYSVVKVD"
BASE COUNT 751 a 568 c 596 g 915 t
ORIGIN
1 gcatgctctg ttgcggtccg cttcggtttc tgttgcggga cccggggtgt ctcctagcgc
61 aaccggaact agccttctgg gggccggctt cctttatctc tggcggcctt gtagtcgtct
121 ccgagactcc ccacccctcc ttccctcttg accccctagg tttgattgcc ctttccccga
181 aacaactatc atgagcgcga ggctgccggt gttgtctcca cctcggtggc cgcggctgtt
241 gctgctgtcg ctgctcctgc tgggggcggt tcctggcccg cgccggagcg gcgctttcta
301 cctgcccggc ctggcgcccg tcaacttctg cgacgaagaa aaaaagagcg acgagtgcaa
361 ggccgaaata gaactatttg tgaacagact tgattcagtg gaatcagttc ttccttatga
421 atacacagcg tttgattttt gccaagcatc agaaggaaag cgcccatctg aaaatcttgg
481 tcaggtacta ttcggggaaa gaattgaacc ttcaccatat aagtttacgt ttaataagaa
541 ggagacctgt aagcttgttt gtacaaaaac ataccataca gagaaagctg aagacaaaca
601 aaagttagaa ttcttgaaaa aaagcatgtt attgaattat caacatcact ggattgtgga
661 taatatgcct gtaacgtggt gttacgatgt tgaagatggt cagaggttct gtaatcctgg
721 atttcctatt ggctgttaca ttacagataa aggccatgca aaagatgcct gtgttattag
781 ttcagatttc catgaaagag atacatttta catcttcaac catgttgaca tcaaaatata
841 ctatcatgtt gttgaaactg ggtccatggg agcaagatta gtggctgcta aacttgaacc
901 gaaaagcttc aaacataccc atatagataa accagactgc tcagggcccc ccatggacat
961 aagtaacaag gcttctgggg agataaaaat tgcctatact tactctgtta gcttcgagga
1021 agatgataag atcagatggg cgtctagatg ggactatatt ctggagtcta tgcctcatac
1081 ccacattcag tggtttagca ttatgaattc cctggtcatt gttctcttct tatctggaat
1141 ggtagctatg attatgttac ggacactgca caaagatatt gctagatata atcagatgga
1201 ctctacggaa gatgcccagg aagaatttgg ctggaaactt gttcatggtg atatattccg
1261 tcctccaaga aaagggatgc tgctatcagt ctttctagga tccgggacac agattttaat
1321 tatgaccttt gtgactctat ttttcgcttg cctgggattt ttgtcacctg ccaaccgagg
1381 agcgctgatg acgtgtgctg tggtcctgtg ggtgctgctg ggcacccctg caggctatgt
1441 tgctgccaga ttctataagt cctttggagg tgagaagtgg aaaacaaatg ttttattaac
1501 atcatttctt tgtcctggga ttgtatttgc tgacttcttt ataatgaatc tgatcctctg
1561 gggagaagga tcttcagcag ctattccttt tgggacactg gttgccatat tggccctttg
1621 gttctgcata tctgtgcctc tgacgtttat tggtgcatac tttggtttta agaagaatgc
1681 cattgaacac ccagttcgaa ccaatcagat tccacgtcag attcctgaac agtcgttcta
1741 cacgaagccc ttgcctggta ttatcatggg agggattttg ccctttggct gcatctttat
1801 acaacttttc ttcattctga atagtatttg gtcacaccag atgtattaca tgtttggctt
1861 cctatttctg gtgtttatca ttttggttat tacctgttct gaagcaacta tacttctttg
1921 ctatttccac ctatgtgcag aggattatca ttggcaatgg cgttcattcc ttacgagtgg
1981 ctttactgca gtttatttct taatctatgc agtacactac ttcttttcaa aactgcagat
2041 cacgggaaca gcaagcacaa ttctgtactt tggttatacc atgataatgg ttttgatctt
2101 ctttcttttt acaggaacaa ttggcttctt tgcatgcttt tggtttgtta ccaaaatata
2161 cagtgtggtg aaggttgact gaagaagtcc agtgtgtcca gttaaaacag aaataaatta
2221 aactcttcat caacaaagac ctgtttttgt gactgccttg agttttatca gaattattgg
2281 cctagtaatc cttcagaaac accgtaattc taaataaacc tcttcccata cacctttccc
2341 ccataagatg tgtcttcaac actataaagc atttgtattg tgatttgatt aagtatatat
2401 ttggttgttc tcaatgaaga gcaaatttaa atattatgtg catttgtaaa tacagtagct
2461 ataaaatttt ccatacttct aatggcagaa tagaggaggc catattaaat aatactgatg
2521 aaaggcagga cactgcattg taaataggat tttctaggct cggtaggcag aaagaattat
2581 ttttctttga aggaaataac tttttatcat ggtaattttg aaggatgatt cctatgatgt
2641 gttcaccagg ggaatgtggc ttttaaagaa aatcttctat tggttgtaac tgttcatatc
2701 ttcttacttt tctgtgttga cttcattatt cccatggtat tggcctttta aactatgtgc
2761 ctctgagtct ttcaatttat aaatttgtta tcttaataaa tattataaaa atgtcaaaaa
2821 aaaaaaaaaa
//