LOCUS BC110607 3378 bp mRNA linear HUM 19-MAR-2007
DEFINITION Homo sapiens EPH receptor B6, mRNA (cDNA clone MGC:129911
IMAGE:40028687), complete cds.
ACCESSION BC110607
VERSION BC110607.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3378)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3378)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-DEC-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 13 Row: k Column: 16.
FEATURES Location/Qualifiers
source 1..3378
/db_xref="H-InvDB:HIT000339641"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:129911 IMAGE:40028687"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: GGACAAGGAG sequenced
from the forward primer"
gene 1..3378
/gene="EPHB6"
/gene_synonym="HEP"
/db_xref="GeneID:2051"
/db_xref="HGNC:HGNC:3396"
/db_xref="MIM:602757"
CDS 222..3242
/gene="EPHB6"
/gene_synonym="HEP"
/codon_start=1
/product="EPH receptor B6"
/protein_id="AAI10608.2"
/db_xref="GeneID:2051"
/db_xref="HGNC:HGNC:3396"
/db_xref="MIM:602757"
/translation="MVCSLWVLLLVSSVLALEEVLLDTTGETSEIGWLTYPPGGWDEV
SVLDDQRRLTRTFEACHVAGAPPGTGQDNWLQTHFVERRGAQRAHIRLHFSVRACSSL
GVSGGTCRETFTLYYRQAEEPDSPDSVSSWHLKRWTKVDTIAADESFPSSSSSSSSSS
SAAWAVGPHGAGQRAGLQLNVKERSFGPLTQRGFYVAFQDTGACLALVAVRLFSYTCP
AVLRSFASFPETQASGAGGASLVAAVGTCVAHAEPEEDGVGGQAGGSPPRLHCNGEGK
WMVAVGGCRCQPGYQPARGDKACQACPRGLYKSSAGNAPCSPCPARSHAPNPAAPVCP
CLEGFYRASSDPPEAPCTGPPSAPQELWFEVQGSALMLHWRLPRELGGRGDLLFNVVC
KECEGRQEPASGGGGTCHRCRDEVHFDPRQRGLTESRVLVGGLRAHVPYILEVQAVNG
VSELSPDPPQAAAINVSTSHEVPSAVPVVHQVSRASNSITVSWPQPDQTNGNILDYQL
RYYDQAEDESHSFTLTSETNTATVTQLSPGHIYGFQVRARTAAGHGPYGGKVYFQTLP
QGELSSQLPERLSLVIGSILGALAFLLLAAITVLAVVFQRKRRGTGYTEQLQQYSSPG
LGVKYYIDPSTYEDPCQAIRELAREVDPAYIKIEEVIGTGSFGEVRQGRLQPRGRREQ
TVAIQALWAGGAESLQMTFLGRAAVLGQFQHPNILRLEGVVTKSRPLMVLTEFMELGP
LDSFLRQREGQFSSLQLVAMQRGVAAAMQYLSSFAFVHRSLSAHSVLVNSHLVCKVAR
LGHSPQGPSCLLRWAAPEVIAHGKHTTSSDVWSFGILMWEVMSYGERPYWDMSEQEVL
NAIEQEFRLPPPPGCPPGLHLLMLDTWQKDRARRPHFDQLVAAFDKMIRKPDTLQAGG
DPGERPSQALLTPVALDFPCLDSPQAWLSAIGLECYQDNFSKFGLCTFSDVAQLSLED
LPALGITLAGHQKKLLHHIQLLQQHLRQQGSVEV"
BASE COUNT 644 a 1036 c 1048 g 650 t
ORIGIN
1 ggctgttgga ggaagggagg agagtaaatg aagagaaaga actggaataa ccccttgcag
61 aaaaaaaaaa aaagggaagc aagcttagct gtacaccctg agtcttgcaa aagctgcagc
121 cccacccagg agcagggtgg tggctggggc gatggtggac gccctgaaga tgtcccatgg
181 ctactgaagg ggctgcccag ttagggaaca gagtggcggg catggtgtgt agcctatggg
241 tgctgctcct ggtgtcttca gttctggctc tggaagaggt attgctggac accaccggag
301 agacatctga gattggctgg ctcacctacc caccaggggg gtgggacgag gtgagtgttc
361 tggacgacca gcgacgcctg actcggacct ttgaggcatg tcatgtggca ggggcccctc
421 caggcaccgg gcaggacaat tggttgcaga cacactttgt ggagcggcgc ggggcccaga
481 gggcgcacat tcgactccac ttctctgtgc gggcatgctc cagcctgggt gtgagcggcg
541 gcacctgccg ggagaccttc accctttact accgtcaggc tgaggagccc gacagccctg
601 acagcgtttc ctcctggcac ctcaaacgct ggaccaaggt ggacacaatt gcagcagacg
661 agagctttcc ctcctcctcc tcctcctcct cctcttcttc ctctgcagcg tgggctgtgg
721 gaccccacgg ggctgggcag cgggctggac tgcaactgaa cgtcaaagag cggagctttg
781 ggcctctcac ccaacgcggc ttctacgtgg ccttccagga cacgggggcc tgcctggccc
841 tggtcgctgt caggctcttc tcctacacct gccctgccgt gctccgatcc tttgcttcct
901 ttccagagac gcaggccagt ggggctgggg gggcctccct ggtggcagct gtgggcacct
961 gtgtggctca tgcagagcca gaggaggatg gagtaggggg ccaggcagga ggcagccccc
1021 ccaggctgca ctgcaacggg gagggcaagt ggatggtagc tgtcgggggc tgccgctgcc
1081 agcctggata ccaaccagca cgaggagaca aggcctgcca agcctgccca cgggggctct
1141 ataagtcttc tgctgggaat gctccctgct caccatgccc tgcccgcagt cacgctccca
1201 acccagcagc ccccgtttgc ccctgcctgg agggcttcta ccgggccagt tccgacccac
1261 cagaggcccc ctgcactggt cctccatcgg ctccccagga gctttggttt gaggtgcaag
1321 gctcagcact catgctacac tggcgcctgc ctcgggagct ggggggtcga ggggacctgc
1381 tcttcaatgt cgtgtgcaag gagtgtgaag gccgccagga acctgccagc ggtggtgggg
1441 gcacttgtca ccgctgcagg gatgaggtcc acttcgaccc tcgccagaga ggcctgactg
1501 agagccgagt gttagtgggg ggactccggg cacacgtacc ctacatctta gaggtgcagg
1561 ctgttaatgg ggtgtctgag ctcagccctg accctcctca ggctgcagcc atcaatgtca
1621 gcaccagcca tgaagtgccc tctgctgtcc ctgtggtgca ccaggtgagc cgggcatcca
1681 acagcatcac ggtgtcctgg ccgcagcccg accagaccaa tgggaacatc ctggactatc
1741 agctccgcta ctatgaccag gcagaagacg aatcccactc cttcaccctg accagcgaga
1801 ccaacactgc caccgtgaca cagctgagcc ctggccacat ctatggtttc caggtgcggg
1861 cccggactgc tgccggccac ggcccctacg ggggcaaagt ctatttccag acacttcctc
1921 aaggggagct gtcttcccag cttccggaaa gactctcctt ggtgatcggc tccatcctgg
1981 gggctttggc cttcctcctg ctggcagcca tcaccgtgct ggcggtcgtc ttccagcgga
2041 agcggcgtgg gactggctac acggagcagc tgcagcaata cagcagccca ggactcgggg
2101 tgaagtatta catcgacccc tccacctacg aggacccctg tcaggccatc cgagaacttg
2161 cccgggaagt cgatcctgct tatatcaaga ttgaggaggt cattgggaca ggctcttttg
2221 gagaagtgcg ccagggccgc ctgcagccac ggggacggag ggagcagact gtggccatcc
2281 aggccctgtg ggccgggggc gccgaaagcc tgcagatgac cttcctgggc cgggccgcag
2341 tgctgggtca gttccagcac cccaacatcc tgcggctgga gggcgtggtc accaagagcc
2401 gacccctcat ggtgctgacg gagttcatgg agcttggccc cctggacagc ttcctcaggc
2461 agcgggaggg ccagttcagc agcctgcagc tggtggccat gcagcgggga gtggctgctg
2521 ccatgcagta cctgtccagc tttgccttcg tccatcgctc gctgtctgcc cacagcgtgc
2581 tggtgaatag ccacttggtg tgcaaggtgg cccgtcttgg ccacagtcct cagggcccaa
2641 gttgtttgct tcgctgggca gccccagagg tcattgcaca tggaaagcat acaacatcca
2701 gtgatgtctg gagctttggg atactcatgt gggaagtgat gagttatgga gaacggcctt
2761 actgggacat gagtgagcag gaggtactaa atgcaataga gcaggagttc cggctgcccc
2821 cgcctccagg ctgtcctcct ggattacatc tacttatgtt ggacacttgg cagaaggacc
2881 gtgcccggcg gcctcatttt gaccagctgg tggctgcatt tgacaagatg atccgcaagc
2941 cagataccct gcaggctggc ggggacccag gggaaaggcc ttcccaggcc cttctgaccc
3001 ctgtggccct ggactttcct tgtctggact caccccaggc ctggctttca gccattggac
3061 tggagtgcta ccaggacaac ttctccaagt ttggcctctg taccttcagt gatgtggctc
3121 agctcagcct agaagacctg cctgccctgg gcatcaccct ggctggccac cagaagaagc
3181 tgctgcacca catccagctc cttcagcaac acctgaggca gcagggctca gtggaggtct
3241 gagaatgacg atacccgtga ctcagccctg gacactggtc cgagaaggga catgtgggac
3301 gtgagccggg ctccaacagc ctctgtgaga gatgccccac accaaaccca accctcccga
3361 tggctgcatt ccctggtc
//