LOCUS BC110606 3309 bp mRNA linear HUM 04-OCT-2006
DEFINITION Homo sapiens EPH receptor B6, mRNA (cDNA clone MGC:129910
IMAGE:40028676), complete cds.
ACCESSION BC110606
VERSION BC110606.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3309)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3309)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-DEC-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 13 Row: k Column: 15.
FEATURES Location/Qualifiers
source 1..3309
/db_xref="H-InvDB:HIT000339640"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:129910 IMAGE:40028676"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: NA"
gene 1..3309
/gene="EPHB6"
/gene_synonym="HEP"
/db_xref="GeneID:2051"
/db_xref="HGNC:HGNC:3396"
/db_xref="MIM:602757"
CDS 984..3173
/gene="EPHB6"
/gene_synonym="HEP"
/codon_start=1
/product="EPHB6 protein"
/protein_id="AAI10607.1"
/db_xref="GeneID:2051"
/db_xref="HGNC:HGNC:3396"
/db_xref="MIM:602757"
/translation="MVAVGGCRCQPGYQPARGDKACQACPRGLYKSSAGNAPCSPCPA
RSHAPNPAAPVCPCLEGFYRASSDPPEAPCTGPPSAPQELWFEVQGSALMLHWRLPRE
LGGRGDLLFNVVCKECEGRQEPASGGGGTCHRCRDEVHFDPRQRGLTESRVLVGGLRA
HVPYILEVQAVNGVSELSPDPPQAAAINVSTSHEVPSAVPVVHQVSRASNSITVSWPQ
PDQTNGNILDYQLRYYDQAEDESHSFTLTSETNTATVTQLSPGHIYGFQVRARTAAGH
GPYGGKVYFQTLPQGELSSQLPERLSLVIGSILGALAFLLLAAITVLAVVFQRKRRGT
GYTEQLQQYSSPGLGVKYYIDPSTYEDPCQAIRELAREVDPAYIKIEEVIGTGSFGEV
RQGRLQPRGRREQTVAIQALWAGGAESLQMTFLGRAAVLGQFQHPNILRLEGVVTKSR
PLMVLTEFMELGPLDSFLRQREGQFSSLQLVAMQRGVAAAMQYLSSFAFVHRSLSAHS
VLVNSHLVCKVARLGHSPQGPSCLLRWAAPEVIAHGKHTTSSDVWSFGILMWEVMSYG
ERPYWDMSEQEVLNAIEQEFRLPPPPGCPPGLHLLMLDTWQKDRARRPHFDQLVAAFD
KMIRKPDTLQAGGDPGERPSQALLTPVALDFPCLDSPQAWLSAIGLECYQDNFSKFGL
CTFSDVAQLSLEDLPALGITLAGHQKKLLHHIQLLQQHLRQQGSVEV"
BASE COUNT 627 a 1018 c 1025 g 639 t
ORIGIN
1 ggctgttgga ggaagggagg agagtaaatg aagagaaaga actggaataa ccccttgcag
61 aaaaaaaaaa aaaggcaagc ttagctgtac accctgagtc ttgcaaaagc tgcagcccca
121 cccaggagca gggtggtggc tggggcgatg gtggacgccc tgaagatgtc ccatggctac
181 tgaaggggct gcccagttag ggaacagagt ggcgggcatg gtgtgtagcc tatgggtgct
241 gctcctggtg tcttcagttc tggctctgga agtgggacga ggtgagtgtt ctggacgacc
301 agcgacgcct gactcggacc tttgaggcat gtcatgtggc aggggcccct ccaggcaccg
361 ggcaggacaa ttggttgcag acacactttg tggagcggcg cggggcccag agggcgcaca
421 ttcgactcca cttctctgtg cgggcatgct ccagcctggg tgtgagcggc ggcacctgcc
481 gggagacctt caccctttac taccgtcagg ctgaggagcc cgacagccct gacagcgttt
541 cctcctggca cctcaaacgc tggaccaagg tggacacaat tgcagcagac gagagctttc
601 cctcctcctc ctcctcctcc tcctcttctt cctctgcagc gtgggctgtg ggaccccacg
661 gggctgggca gcgggctgga ctgcaactga acgtcaaaga gcggagcttt gggcctctca
721 cccaacgcgg cttctacgtg gccttccagg acacgggggc ctgcctggcc ctggtcgctg
781 tcaggctctt ctcctacacc tgccctgccg tgctccgatc ctttgcttcc tttccagaga
841 cgcaggccag tggggctggg ggggcctccc tggtggcagc tgtgggcacc tgtgtggctc
901 atgcagagcc agaggaggat ggagtagggg gccaggcagg aggcagcccc cccaggctgc
961 actgcaacgg ggagggcaag tggatggtag ctgtcggggg ctgccgctgc cagcctggat
1021 accaaccagc acgaggagac aaggcctgcc aagcctgccc acgggggctc tataagtctt
1081 ctgctgggaa tgctccctgc tcaccatgcc ctgcccgcag tcacgctccc aacccagcag
1141 cccccgtttg cccctgcctg gagggcttct accgggccag ttccgaccca ccagaggccc
1201 cctgcactgg tcctccatcg gctccccagg agctttggtt tgaggtgcaa ggctcagcac
1261 tcatgctaca ctggcgcctg cctcgggagc tggggggtcg aggggacctg ctcttcaatg
1321 tcgtgtgcaa ggagtgtgaa ggccgccagg aacctgccag cggtggtggg ggcacttgtc
1381 accgctgcag ggatgaggtc cacttcgacc ctcgccagag aggcctgact gagagccgag
1441 tgttagtggg gggactccgg gcacacgtac cctacatctt agaggtgcag gctgttaatg
1501 gggtgtctga gctcagccct gaccctcctc aggctgcagc catcaatgtc agcaccagcc
1561 atgaagtgcc ctctgctgtc cctgtggtgc accaggtgag ccgggcatcc aacagcatca
1621 cggtgtcctg gccgcagccc gaccagacca atgggaacat cctggactat cagctccgct
1681 actatgacca ggcagaagac gaatcccact ccttcaccct gaccagcgag accaacactg
1741 ccaccgtgac acagctgagc cctggccaca tctatggttt ccaggtgcgg gcccggactg
1801 ctgccggcca cggcccctac gggggcaaag tctatttcca gacacttcct caaggggagc
1861 tgtcttccca gcttccggaa agactctcct tggtgatcgg ctccatcctg ggggctttgg
1921 ccttcctcct gctggcagcc atcaccgtgc tggcggtcgt cttccagcgg aagcggcgtg
1981 ggactggcta cacggagcag ctgcagcaat acagcagccc aggactcggg gtgaagtatt
2041 acatcgaccc ctccacctac gaggacccct gtcaggccat ccgagaactt gcccgggaag
2101 tcgatcctgc ttatatcaag attgaggagg tcattgggac aggctctttt ggagaagtgc
2161 gccagggccg cctgcagcca cggggacgga gggagcagac tgtggccatc caggccctgt
2221 gggccggggg cgccgaaagc ctgcagatga ccttcctggg ccgggccgca gtgctgggtc
2281 agttccagca ccccaacatc ctgcggctgg agggcgtggt caccaagagc cgacccctca
2341 tggtgctgac ggagttcatg gagcttggcc ccctggacag cttcctcagg cagcgggagg
2401 gccagttcag cagcctgcag ctggtggcca tgcagcgggg agtggctgct gccatgcagt
2461 acctgtccag ctttgccttc gtccatcgct cgctgtctgc ccacagcgtg ctggtgaata
2521 gccacttggt gtgcaaggtg gcccgtcttg gccacagtcc tcagggccca agttgtttgc
2581 ttcgctgggc agccccagag gtcattgcac atggaaagca tacaacatcc agtgatgtct
2641 ggagctttgg gatactcatg tgggaagtga tgagttatgg agaacggcct tactgggaca
2701 tgagtgagca ggaggtacta aatgcaatag agcaggagtt ccggctgccc ccgcctccag
2761 gctgtcctcc tggattacat ctacttatgt tggacacttg gcagaaggac cgtgcccggc
2821 ggcctcattt tgaccagctg gtggctgcat ttgacaagat gatccgcaag ccagataccc
2881 tgcaggctgg cggggaccca ggggaaaggc cttcccaggc ccttctgacc cctgtggccc
2941 tggactttcc ttgtctggac tcaccccagg cctggctttc agccattgga ctggagtgct
3001 accaggacaa cttctccaag tttggcctct gtaccttcag tgatgtggct cagctcagcc
3061 tagaagacct gcctgccctg ggcatcaccc tggctggcca ccagaagaag ctgctgcacc
3121 acatccagct ccttcagcaa cacctgaggc agcagggctc agtggaggtc tgagaatgac
3181 gatacccgtg actcagccct ggacactggt ccgagaaggg acatgtggga cgtgagccgg
3241 gctccaacag cctctgtgag agatgcccca caccaaaccc aaccctcccg atggctgcat
3301 tccctggtc
//