LOCUS BC110540 2850 bp mRNA linear HUM 07-AUG-2007
DEFINITION Homo sapiens solute carrier family 4, sodium borate transporter,
member 11, mRNA (cDNA clone MGC:126418 IMAGE:40035522), complete
cds.
ACCESSION BC110540
VERSION BC110540.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2850)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2850)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-DEC-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 14 Row: n Column: 3.
FEATURES Location/Qualifiers
source 1..2850
/db_xref="H-InvDB:HIT000339603"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:126418 IMAGE:40035522"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_282"
/note="Vector: pCR-Blunt II-TOPO; Clone identification
sequence tag: CGCTTCT sequenced from the reverse primer"
gene 1..2850
/gene="SLC4A11"
/gene_synonym="BTR1"
/gene_synonym="dJ794I6.2"
/gene_synonym="NABC1"
/db_xref="GeneID:83959"
/db_xref="HGNC:HGNC:16438"
/db_xref="MIM:610206"
CDS 22..2697
/gene="SLC4A11"
/gene_synonym="BTR1"
/gene_synonym="dJ794I6.2"
/gene_synonym="NABC1"
/codon_start=1
/product="solute carrier family 4, sodium borate
transporter, member 11"
/protein_id="AAI10541.1"
/db_xref="GeneID:83959"
/db_xref="HGNC:HGNC:16438"
/db_xref="MIM:610206"
/translation="MSQVGGRGDRCTQEVQGLVHGAGDLSASLAENSPTMSQNGYFED
SSYYKCDTDDTFEAREEILGDEAFDTANSSIVSGESIRFFVNVNLEMQATNTENEATS
GGCVLLHTSRKYLKLKNFKEEIRAHRDLDGFLAQASIVLNETATSLDNVLRTMLRRFA
RDPDNNEPNCNLDLLMAMLFTDAGAPMRGKVHLLSDTIQGVTATVTGVRYQQSWLCII
CTMKALQKRHVCISRLVRPQNWGENSCEVRFVILVLAPPKMKSTKTAMEVARTFATMF
SDIAFRQKLLETRTEEEFKEALVHQRQLLTMVSHGPVAPRTKERSTVSLPAHRHPEPP
KCKDFVPFGKGIREDIARRFPLYPLDFTDGIIGKNKAVGKYITTTLFLYFACLLPTIA
FGSLNDENTDGAIDVQKTIAGQSIGGLLYALFSGQPLVILLTTAPLALYIQVIRVICD
DYDLDFNSFYAWTGLWNSFFLALYAFFNLSLVMSLFKRSTEEIIALFISITFVLDAVK
GTVKIFWKYYYGHYLDDYHTKRTSSLVSLSGLGASLNASLHTALNASFLASPTELPSA
THSGQATAVLSLLIMLGTLWLGYTLYQFKKSPYLHPCVREILSDCALPIAVLAFSLIS
SHGFREIEMSKFRYNPSESPFAMAQIQSLSLRAVSGAMGLGFLLSMLFFIEQNLVAAL
VNAPENRLVKGTAYHWDLLLLAIINTGLSLFGLPWIHAAYPHSPLHVRALALVEERVE
NGHIYDTIVNVKETRLTSLGASVLVGLSLLLLPVPLQWIPKPVRYGLFLYIALTSLDG
NQLVQRVALLLKEQTAYPPTHYIRRVPQRKIHYFTGLQVLQLLLLCAFGMSSLPYMKM
IFPLIMIAMIPIRYILLPRIIEAKYLDVMDAEHRP"
BASE COUNT 561 a 920 c 770 g 599 t
ORIGIN
1 atccctcgga agagcgaagg aatgagccag gtcggggggc ggggagacag gtgcacacag
61 gaggtccagg gcttggtcca tggggctggt gacctttctg cttcccttgc agaaaactct
121 cccaccatgt cgcagaatgg atacttcgag gattcaagct actacaagtg tgacacagat
181 gacaccttcg aagcccgaga ggagatcctg ggggatgagg ccttcgacac tgccaactcc
241 tccatcgtgt ctggcgagag tatccgtttt tttgtcaatg tcaaccttga gatgcaggcc
301 accaacactg agaatgaagc gacttccggt ggctgtgtgc tcctgcacac ctcccgaaag
361 tacctgaagt taaagaactt caaggaagag atccgtgcgc accgcgacct agatggcttc
421 ctggcgcagg ccagcatcgt cctgaacgag acggccacct ccctggataa cgtgctgcgg
481 accatgcttc gccgcttcgc cagggaccct gacaacaatg agcccaactg caacctggac
541 ctgctcatgg ccatgctctt caccgatgcc ggggcaccca tgcggggtaa agtccacctg
601 ctgtcagata ccatccaagg ggtcaccgcc acagtgacag gggtgcggta ccagcagtca
661 tggctctgca tcatctgtac catgaaggcc ctacagaagc ggcacgtgtg catcagccgc
721 ctggttcgcc cacagaactg gggggagaat tcctgtgagg ttcggttcgt catcctggtg
781 ctggccccac ccaagatgaa aagcactaag actgcgatgg aggtggcgcg cacgtttgcc
841 accatgttct cggatatcgc cttccgccag aagctcctgg agacccgcac agaggaggaa
901 ttcaaggagg ccttggtgca tcagagacag ctgctcacca tggtgagcca cggtccagtg
961 gcgccgagaa cgaaggaacg cagcacagtc tccctccctg cccacagaca cccagagccc
1021 ccaaagtgca aggactttgt cccttttggg aagggcatcc gggaggacat cgcacgcagg
1081 ttccccttgt accccttgga cttcactgat ggcattattg ggaaaaacaa ggctgtgggc
1141 aaatacatca ccaccaccct gttcctctac ttcgcctgcc tcctgcccac catcgctttc
1201 gggtctctca atgacgagaa cacagacggg gccatcgacg tgcagaagac catagccggg
1261 cagagcatcg ggggcctgct ctacgcgctc ttctctgggc agccattggt gattctgctg
1321 accaccgcgc ccctggcgct ctacatccag gtgattcgtg tcatctgtga tgactatgac
1381 ctggacttca actccttcta cgcatggacg ggcctgtgga atagtttctt ccttgcgctt
1441 tatgcctttt tcaacctcag cctggtcatg agtctcttca agaggtcgac ggaggagatc
1501 atcgccctct tcatttccat cacgtttgtg ctggatgccg tcaagggcac ggttaaaatc
1561 ttctggaagt actactatgg gcattacttg gacgactatc acacaaaaag gacttcatcc
1621 cttgtcagcc tgtcaggcct cggcgccagc ctcaacgcca gcctccacac tgccctcaac
1681 gccagcttcc tcgccagccc cacggagctg ccctcggcca cacactcagg ccaggcgacc
1741 gccgtgctca gcctcctcat catgctgggc acgctctggc tgggctacac cctctaccaa
1801 ttcaagaaga gcccctacct gcacccctgc gtgcgagaga tcctgtccga ctgcgccctg
1861 cccatcgcgg tgctcgcctt ctccctcatc agctcccatg gcttccggga aatcgagatg
1921 agcaagttcc gctacaaccc cagcgagagc ccctttgcga tggcgcagat ccagtcgctg
1981 tccctgaggg ccgtcagcgg tgccatgggc ctcggcttcc tgctgtccat gctcttcttc
2041 atcgagcaga acttggtggc cgccttggtg aatgcaccgg agaacaggct ggtgaagggc
2101 actgcctacc actgggacct cctgctcctc gccatcatca acacagggct gtctctgttt
2161 gggctgcctt ggatccatgc cgcctacccc cactccccgc tgcacgtgcg agccctggcc
2221 ttagtggagg agcgtgtgga gaacggacac atctatgaca cgattgtgaa cgtgaaggag
2281 acgcggctga cctcgctggg cgccagcgtc ctggtgggcc tgtccctgtt gctgctgccg
2341 gtcccgcttc agtggatccc caagcccgtg cgctatggcc tcttcctcta catcgcgctc
2401 acctccctcg atggcaacca gctcgtccag cgcgtggccc tgctgctcaa ggagcagact
2461 gcgtaccccc cgacacacta catccggagg gtgccccaga ggaagatcca ctacttcacg
2521 ggcctgcagg tgcttcagct gctgctgctg tgtgccttcg gcatgagctc cctgccctac
2581 atgaagatga tctttcccct catcatgatc gccatgatcc ccatccgcta tatcctgctg
2641 ccccgaatca ttgaagccaa gtacttggat gtcatggacg ctgagcacag gccttgactg
2701 gcagaccctg cccacgcccc attcgccagc cctccacgtc ctcccaggct ggctctggag
2761 ctgtgagggg aggtgtaggt gtgtgggtga ctgctctgtg ctgcgccttc tcatggctga
2821 ctcaggcctg gggcatctgg gcattgtagt
//