LOCUS BC110447 3797 bp mRNA linear HUM 04-OCT-2006
DEFINITION Homo sapiens staufen, RNA binding protein, homolog 2 (Drosophila),
mRNA (cDNA clone MGC:119606 IMAGE:40009098), complete cds.
ACCESSION BC110447
VERSION BC110447.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3797)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3797)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-DEC-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 8 Row: j Column: 17.
FEATURES Location/Qualifiers
source 1..3797
/db_xref="H-InvDB:HIT000339543"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:119606 IMAGE:40009098"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_282"
/note="Vector: pCR-Blunt II-TOPO; Clone identification
sequence tag: GTCTCTTA sequenced from the reverse primer"
gene 1..3797
/gene="STAU2"
/gene_synonym="39K2"
/gene_synonym="39K3"
/db_xref="GeneID:27067"
/db_xref="HGNC:HGNC:11371"
/db_xref="MIM:605920"
CDS 44..1483
/gene="STAU2"
/gene_synonym="39K2"
/gene_synonym="39K3"
/codon_start=1
/product="staufen, RNA binding protein, homolog 2
(Drosophila)"
/protein_id="AAI10448.1"
/db_xref="GeneID:27067"
/db_xref="HGNC:HGNC:11371"
/db_xref="MIM:605920"
/translation="MLQINQMFSVQLSLGEQTWESEGSSIKKAQQAVANKALTESTLP
KPVQKPPKSNVNNNPGSITPTVELNGLAMKRGEPAIYRPLDPKPFPNYRANYNFRGMY
NQRYHCPVPKIFYVQLTVGNNEFFGEGKTRQAARHNAAMKALQALQNEPIPERSPQNG
ESGKDMDDDKDANKSEISLVFEIALKRNMPVSFEVIKESGPPHMKSFVTRVSVGEFSA
EGEGNSKKLSKKRAATTVLQELKKLPPLPVVEKPKLFFKKRPKTIVKAGPEYGQGMNP
ISRLAQIQQAKKEKEPDYVLLSERGMPRRREFVMQVKVGNEVATGTGPNKKIAKKNAA
EAMLLQLGYKASTNLQDQLEKTGENKGWSGPKPGFPEPTNNTPKGILHLSPDVYQEME
ASRHKVISGTTLGYLSPKDMNQPSSSFFSISPTSNSSATIARELLMNGTSSTAEAIGL
KGSSPTPPCSPVQPSKQLEYLARIQGFQV"
BASE COUNT 1168 a 693 c 689 g 1247 t
ORIGIN
1 ggagccgtga gggatacagc agtttggtca atattgtctt aacatgcttc aaataaatca
61 gatgttctca gtgcagctga gtcttggtga gcagacatgg gaatccgaag gcagcagtat
121 aaagaaggct cagcaggctg ttgccaataa agctttgact gaatctacgc ttcccaaacc
181 agttcagaag ccacccaaaa gtaatgttaa caataaccca ggcagtataa ctccaactgt
241 ggaactgaat gggcttgcta tgaaaagggg agagcctgcc atctacaggc cattagatcc
301 aaagccattc ccaaattata gagctaatta caactttcgg ggcatgtaca atcagaggta
361 tcattgccca gtgcctaaga tcttttatgt tcagctcact gtaggaaata atgaattttt
421 tggggaagga aagactcgac aagctgctag acacaatgct gcaatgaaag ccctccaagc
481 actgcagaat gaacctattc cagaaagatc tcctcagaat ggtgaatcag gaaaggatat
541 ggatgatgac aaagatgcaa ataagtctga gatcagctta gtgtttgaaa ttgctctgaa
601 gcgaaatatg cctgtcagtt ttgaggttat taaagaaagt ggaccaccac atatgaaaag
661 ctttgttact cgagtgtcag taggagagtt ctctgcagaa ggagaaggaa atagcaaaaa
721 actctccaag aagcgcgctg cgaccaccgt cttacaggag cttaaaaaac ttccacctct
781 tcctgtggtg gaaaagccaa aactattttt taaaaaacgc cctaaaacaa tagtaaaggc
841 cggaccagaa tatggccaag ggatgaaccc tattagccgc ctggcgcaaa ttcaacaggc
901 caaaaaggaa aaggagccgg attatgtttt gctttcagaa agaggaatgc ctcgacgtcg
961 agaatttgtg atgcaggtga aggtaggcaa tgaagttgct acaggaacag gacctaataa
1021 aaagatagcc aaaaaaaatg ctgcagaagc aatgctgtta caacttggtt ataaagcatc
1081 cactaatctt caggatcaac ttgagaagac aggggaaaac aaaggatgga gtggtccaaa
1141 gcctgggttt cctgaaccaa caaataatac tccaaaagga attcttcatt tgtctcctga
1201 tgtttatcaa gagatggaag ccagccgcca caaagtaatc tctggcacta ctctaggcta
1261 tttgtcaccc aaagatatga accaaccttc aagctctttc ttcagtatat ctcccacatc
1321 gaatagttca gctacaattg ccagggaact ccttatgaat ggaacatctt ctacagctga
1381 agccataggt ttaaaaggaa gttctcctac tcccccttgt tctccagtac aaccttcaaa
1441 acaactggaa tatttagcaa ggattcaagg ctttcaggta tgaattaaaa gcaaaaacaa
1501 aaaacaaaac aattcattag cctcagattc ttcatctgta tacatcacaa ggctcattct
1561 tgcctgctag tatggcctac atgccactta cgttttaagt tatttaggaa cacaaaggac
1621 agacaaaaaa gccatatgca catgcctcat tttctcttat ttttgatcta tctagtaatt
1681 cttttgctgc ctgtctcttc tccattttcc ttcttctttt ttaagcattt ttcatattct
1741 tcactgtctt ctatttggtc ttgattaggt gcatctatct cttcgctctg tcttccacaa
1801 acaaaaattc tgccttcaga catttggtgt tagtatttca cactcagttc tccctttttt
1861 tacataagga ttgagtttct ttttatgatg attttacctt tatagcaatt ttgaattttg
1921 cattctgttg ctagtattga ttcaggtaca ccattaagat acaacattct agaagtctat
1981 taccttagga gttaattaaa catgatattt gaagaataat gaaatgcttt atagttgttt
2041 gaggcataac aatgtgtatt tgttttactg gatcatgttt tgaactgact agggagggta
2101 gcacctgcct cagatagtac caacaattct gtttcactgg gtagtctaaa actagcttat
2161 agtttaactt aacttgttgt gtatgtgaat ttagggatgg aaactttttt tcccctattt
2221 attctttgtt tccttctggg aaaaaacccc acaaaaatca gcactccttt atggatacat
2281 tggagctttt gaaagaattg taaactctag gaaggggaaa tatctgtgtc ttgatttctt
2341 agttgccttg aaaatcatgt actgaactgt aaccgctaac ttgactggat gaactagttt
2401 gcttgtgtgt agagagtgta ttgcttcctc agatttcact gttttcatct ccttttccat
2461 cttagtcttt attccttaag accaaaaact gtaatatcct ttagaaatgc tctagaagat
2521 ctgtattgtg tagaatgatc atgtatttat aaatatttta caagtttaga ttataaaatg
2581 aaaaagaagg tcatgtgttt tggggggtat tttgcatgtt cggatttttt tttcccttca
2641 ccgaaccctt ctgattcttt caaactattg ccaggtagtt gttagtgttt ctaattggac
2701 tcttaatatg aacttcaaga agctgttacc agttatcggc tctgtcatct gaaattttaa
2761 ccacttaatt taaagttaca attttagaat ttgtttttgt tgttttacct taagaaacac
2821 aataaatcac tgtttaaaaa agatctcaat ttatataaag tactggaaaa aagctaagta
2881 atttttagtt ctatctataa tctccgtagg atgaattaga aataaattgt gatgaaaaga
2941 aattaactgc ttatttatga atctaatcat ttagaaatgt ctgagagtaa cactgcattc
3001 ttatagaaac aaagcacaaa ttgcattcaa gctctgaatt gattttttgc ttggagctgt
3061 tgttacagta gctgtaattt tgctaccaga atgtcttaat tttttaaatt tgtttttatt
3121 tctaagctct tggcaatgac aataattata attttaacat atcttcactg tagtcaacat
3181 gtagagtctg cttccctcat tattgcattg ctaaggcctt tttaaaaagc ttatgcttac
3241 ataatatact cttttttatg gacacgttat atgtttccaa atctgtgtat tgtgattttt
3301 acatactaat gaatataaac aggtgatttt aaaatattac tgtgcttctt tggttgaatg
3361 agctggtatt gatgtaaaat actctgtcat tgatggacca ctacctgcag ctaagcagtg
3421 agcagaatct ccgggaaatg acttagtctg gccacatgca tagcccatct tcataatgtc
3481 gcagcagaag gttctttgtg gttaaaagtt ttaaagccta tttctttata ggtaaccctc
3541 tcaggtatat ttacctggta gaaaaacatg tagattgttt ctattactta aatgttttaa
3601 ttggactgta gtttagaaat tacaggacca gcttgttaca gattatacac tattctgtta
3661 cttttatttc tgaaacttaa aaacaataaa ttctttttct gtgtttctag gttagaactt
3721 ttttatttta ttgcacactg aacagatact gttgcttatt gaatattgtg taaacccttc
3781 tttggctttc cttgccc
//