LOCUS BC110432 1703 bp mRNA linear HUM 24-SEP-2007
DEFINITION Homo sapiens PCF11, cleavage and polyadenylation factor subunit,
homolog (S. cerevisiae), mRNA (cDNA clone IMAGE:5529131), partial
cds.
ACCESSION BC110432
VERSION BC110432.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1703)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1703)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-NOV-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 233 Row: j Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 33620744.
FEATURES Location/Qualifiers
source 1..1703
/db_xref="H-InvDB:HIT000386569"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5529131"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1703
/gene="PCF11"
/db_xref="GeneID:51585"
/db_xref="HGNC:HGNC:30097"
/db_xref="MIM:608876"
CDS <1..479
/gene="PCF11"
/codon_start=3
/product="PCF11 protein"
/protein_id="AAI10433.1"
/db_xref="GeneID:51585"
/db_xref="HGNC:HGNC:30097"
/db_xref="MIM:608876"
/translation="HFVSVEKEASVAAGSGRRSPARRRRFIPEVPPVSSPIPPPRSAC
GEAGAAREPGRGRGVGREAGYPERLQLQLQRTSEGGRGAMSEQTPAEAGAAGAREDAC
RDYQSSLEDLTFNSKPHINMLTILAEENLPFAKEIVSLIEAQTAKVFIHPAASYYF"
BASE COUNT 384 a 409 c 469 g 441 t
ORIGIN
1 gccattttgt gtctgtggag aaagaagctt ctgtggcggc tggaagtgga cggagatcac
61 ccgcgagacg gcggcgtttc atacccgagg ttccccctgt gtcgtccccc atcccccctc
121 cgcggtcagc atgtggtgaa gccggagccg cgagagagcc ggggagagga agaggagtcg
181 gaagggaggc ggggtatcca gagcggcttc agcttcagct gcagcggacc tcggaggggg
241 gccgcggcgc aatgtcagag cagacgccgg ccgaggccgg tgctgcgggg gcccgggagg
301 acgcctgtcg ggattatcag tcatcgctcg aagacctgac cttcaatagc aagccgcaca
361 tcaatatgct gaccattcta gccgaggaga acctgccctt cgccaaggag atcgtctctc
421 tcatcgaggc ccaaaccgcc aaggttttta tacaccccgc agcctcctat tacttctaat
481 actccctgat tttagtgtca gcctcatccc aggtctcgct tccatcccaa gggggacagt
541 gttccttctc tccaaccccc ccacccccct ccaactcagg ctcggtcttt ggcccaggct
601 tcgagcatgg gcctctgggg gggagggagt ggggaggata aagggtggag tcccacttcc
661 gctttccaac tcccttttta ggccaccgca ttgtatatcc cgacacacac acgctttgaa
721 tagagccctt tggggtgggg gagacttaaa ggcagtttgt ggtttgggga agtaagagtt
781 aacataagcc attttaattc cctgggaagt gggagagtgg gtctcccatt ttccccaagc
841 accctttttg gtaattgtgt tctgtgggtt ggaaggaggt gaagggggac ctgggagcga
901 gctgttggtg ggtgggaata gggatttggc cccgagtgga gcagccgcct gttaggagcc
961 caacatggcg cctgaaaagc acatgatgcg aaagggaaga gaggagaatc cattccctgc
1021 cagccaggca gctgctcact cccgtcagcc ccattttggg gtgggggcgg ctagataaaa
1081 cttttattct cctattggag ggtctaattt gtcccaaaat aggggcaagt ggggttgagg
1141 gtggggtttg ggtgggggga ggagatctta tccaacctgt aggtggagaa ctggcccaga
1201 gggtaacaag tacttgcagt ttctctgaaa agttcagtcc ctcctcctct tccttttctc
1261 tttttctccc ttccctgata gcgaaggagt gtttttcttt accccttgac agaagtggtc
1321 ctctgccacc ttatatttcc ctgtagtcct cctcttctgt ggattcatat gggagcgata
1381 tgtcatttaa gtaaagttac tgttcaactt agttacaatg agttttaata gcgtcccagt
1441 gctacatttt atttttcaag cttgtactca cggtttagtt ttttctagtt gttagtgatt
1501 gcaattatca ggatgagcct ccttttagca gagtgaaccc ctttttaaag gccactttaa
1561 caacaaccac caatatattg tttagagacg gtttctgtct agtgtaaaac ttgagtggtc
1621 tgactctaat aaatggtttt gaaatgtgtg actggtatta taaaatttgt gaataaaaca
1681 tataaaataa aaaaaaaaaa aaa
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