LOCUS BC110418 2898 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens adhesion molecule with Ig-like domain 3, mRNA (cDNA
clone MGC:117236 IMAGE:5211193), complete cds.
ACCESSION BC110418
VERSION BC110418.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2898)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2898)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-NOV-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 233 Row: d Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38454321.
FEATURES Location/Qualifiers
source 1..2898
/db_xref="H-InvDB:HIT000386561"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:117236 IMAGE:5211193"
/tissue_type="Blood, adult leukocytes"
/clone_lib="NIH_MGC_118"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2898
/gene="AMIGO3"
/db_xref="GeneID:386724"
/db_xref="HGNC:HGNC:24075"
CDS 231..1745
/gene="AMIGO3"
/codon_start=1
/product="adhesion molecule with Ig-like domain 3"
/protein_id="AAI10419.1"
/db_xref="GeneID:386724"
/db_xref="HGNC:HGNC:24075"
/translation="MTWLVLLGTLLCMLRVGLGTPDSEGFPPRALHNCPYKCICAADL
LSCTGLGLQDVPAELPAATADLDLSHNALQRLRPGWLAPLFQLRALHLDHNELDALGR
GVFVNASGLRLLDLSSNTLRALGRHDLDGLGALEKLLLFNNRLVHLDEHAFHGLRALS
HLYLGCNELASFSFDHLHGLSATHLLTLDLSSNRLGHISVPELAALPAFLKNGLYLHN
NPLPCDCRLYHLLQRWHQRGLSAVRDFAREYVCLAFKVPASRVRFFQHSRVFENCSSA
PALGLERPEEHLYALVGRSLRLYCNTSVPAMRIAWVSPQQELLRAPGSRDGSIAVLAD
GSLAIGNVQEQHAGLFVCLATGPRLHHNQTHEYNVSVHFPRPEPEAFNTGFTTLLGCA
VGLVLVLLYLFAPPCRCCRRACRCRRWPQTPSPLQELSAQSSVLSTTPPDAPSRKASV
HKHVVFLEPGRRGLNGRVQLAVAEEFDLYNPGGLQLKAGSESASSIGSEGPMTT"
BASE COUNT 551 a 986 c 839 g 522 t
ORIGIN
1 gaactcgctt ggagagggct agcgaagccg aagggagcgc ggctaagagt gccgcaccgc
61 ctcacaacct gggaaccgga gagtaggggc cgtcggctgg caagaacccg ccgtgcctcc
121 tcggcaaggg ccatccggtg ccacccatgt cgcactagag cagaagaggg tgagtcctgg
181 aactgcaacc tgcacagagc tgctctgtac tgtccctggt ggtcgccgcc atgacctggt
241 tggtgctgct ggggacactg ctctgcatgc tgcgcgttgg gttaggcacc ccggactccg
301 agggtttccc gccccgtgcg ctccacaact gcccctacaa atgtatctgc gctgccgacc
361 tgctaagctg cactggccta gggctgcagg acgtgccagc cgagttacct gccgctactg
421 cggacctcga cctgagccac aacgcgctcc agcgcctgcg ccccggctgg ttggcgcccc
481 tcttccagct gcgcgccctg cacctagacc acaacgaact agatgcgctg ggtcgcggcg
541 tcttcgtcaa cgccagcggc ctgaggctgc tcgatctatc atctaacacg ttgcgggcgc
601 ttggccgcca cgacctcgac gggctggggg cgctggagaa gctgcttctg ttcaataacc
661 gcttggtgca cttggacgag catgccttcc acggcctgcg cgcgctcagc catctctacc
721 tgggctgcaa cgaactcgcc tcgttctcct tcgaccacct gcacggtctg agcgccaccc
781 acctgcttac tctggacctc tcctccaacc ggctgggaca catctccgta cctgagctgg
841 ccgcgctgcc ggccttcctc aagaacggcc tctacttgca caacaaccct ttgccttgcg
901 actgccgcct ctaccacctg ctacagcgct ggcaccagcg gggcctgagc gccgtgcgcg
961 actttgcgcg cgagtacgta tgcttggcct tcaaggtacc cgcgtcccgc gtgcgcttct
1021 tccagcacag ccgcgtcttt gagaactgct cgtcggcccc agctcttggc ctagagcggc
1081 cggaagagca cctgtacgcg ctggtgggtc ggtccctgag gctttactgc aacaccagcg
1141 tcccggccat gcgcattgcc tgggtttcgc cgcagcagga gcttctcagg gcgccaggat
1201 cccgcgatgg cagcatcgcg gtgctggccg acggcagctt ggccataggc aacgtacagg
1261 agcagcatgc gggactcttc gtgtgcctgg ccactgggcc ccgcctgcac cacaaccaga
1321 cgcacgagta caacgtgagc gtgcactttc cgcgcccaga gcccgaggct ttcaacacag
1381 gcttcaccac actgctgggc tgtgccgtgg gccttgtgct cgtgctgctc tacctgttcg
1441 ccccaccctg ccgctgctgc cgccgtgcct gccgctgccg ccgctggccc caaacaccca
1501 gcccgctcca agagctgagc gcacagtcct cagtactcag caccacaccg ccagacgcac
1561 ccagccgcaa ggccagcgtc cacaagcacg tagtctttct ggagccaggc cggaggggcc
1621 tcaatggccg cgtgcagctg gcagtagctg aggaattcga tctctacaac cctggaggcc
1681 tgcagctgaa ggctggctct gagtccgcca gctccatagg ctccgagggt cccatgacaa
1741 cctagactgc ccagggctcc cccacccagg cccccaccct cttgctgctc gccctgctcc
1801 ctgcttcggt ccagagaact ggcagatact ggtgggaagc actgtgcctg gccccccagc
1861 ttcctgtatg ggcctcgaaa cacaatgggc cttctcgctc actggtagag acaggggttg
1921 tggtccccaa cctgccttct gctctgcccc tgcacaggac ccaaaggccc caggccctgc
1981 aaggtgtgct agttcctgct ttcccgcgga cttcctagtg cccaaatgcc ctgtgaggct
2041 gagagaccca ggcccctgtg gctttcaaca cagcacagct gtggaagtgg ctgtgttctt
2101 ctacagcctg tggaagaacc cctgtagcag agcctcccgt ccaccctcag gggctgaggc
2161 agctctcgag gagtggtgct caagagctga cgcagggcca cctccccttc ccaagggggt
2221 gggagggagt gggcccacag ggaaaagaag gcggctctga aggaagatct cgcccacacc
2281 ccaggacaga aagaggaaac aagcccgccc tctggtgaaa tgggactccc tccatccacc
2341 aacacccaac ctcctgaaag cttcacaact tcacgcagag tccggtgggc aggcaccagg
2401 caggaaaggc tcctcaagag gttcctggtg gtctggccta agccccagcc agaggccctg
2461 ctctctctgg cctggggcat ccacccgttg ttctgaaggc agagcccatt ctgtgggctc
2521 acaagacaca gtgaagggga tcatggcctg cacccctgct tttcagcagt aaaaagcccg
2581 aaaagcctgg cgagcatggc cgagctggga gggccgagcc ggaactccac gtccctcgag
2641 agcaggagcc tcttaagggc tggcactggt ctcagcctaa tggctgaggc ggtaccctgg
2701 cttcatatgc atctcactgc tcccactgca ggggggcagg gaaggggggt ctgggagccc
2761 ttcatgtgtg ggggccgagc tgggggcccc catggccatc ctggacctcg ctgctccaga
2821 gtttaataaa ggtagcacat gcttattgct agagcctttg caaaaaaaaa aaaaaaaaaa
2881 aaaaaaaaaa aaaaaaaa
//