LOCUS BC110384 1500 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens cation channel, sperm associated 3, mRNA (cDNA clone
MGC:117279 IMAGE:5166215), complete cds.
ACCESSION BC110384
VERSION BC110384.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1500)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1500)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-NOV-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 233 Row: a Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 29789450.
FEATURES Location/Qualifiers
source 1..1500
/db_xref="H-InvDB:HIT000386529"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:117279 IMAGE:5166215"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1500
/gene="CATSPER3"
/gene_synonym="CACRC"
/db_xref="GeneID:347732"
/db_xref="HGNC:HGNC:20819"
/db_xref="MIM:609120"
CDS 87..1283
/gene="CATSPER3"
/gene_synonym="CACRC"
/codon_start=1
/product="cation channel, sperm associated 3"
/protein_id="AAI10385.1"
/db_xref="GeneID:347732"
/db_xref="HGNC:HGNC:20819"
/db_xref="MIM:609120"
/translation="MSQHRHQRHSRVISSSPVDTTSVGFCPTFKKFKRNDDECRAFVK
RVIMSRFFKIIMISTVTSNAFFMALWTSYDIRYRLFRLLEFSEIFFVSICTSELSMKV
YVDPINYWKNGYNLLDVIIIIVMFLPYALRQLMGKQFTYLYIADGMQSLRILKLIGYS
QGIRTLITAVGQTVYTVASVLLLLFLLMYIFAILGFCLFGSPDNGDHDNWGNLAAAFF
TLFSLATVDGWTDLQKQLDNREFALSRAFTIIFILLASFIFLNMFVGVMIMHTEDSIR
KFERELMLEQQEMLMGEKQVILQRQQEEISRLMHIQKNADCTSFSELVENFKKTLSHT
DPMVLDDFGTSLPFIDIYFSTLDYQDTTVHKLQELYYEIVHVLSLMLEDLPQEKPQSL
EKVDEK"
BASE COUNT 476 a 329 c 334 g 361 t
ORIGIN
1 cagaatccag acgctaagga aaatccctaa gcagagattt tctgttggat gctaaaagca
61 aggaataaaa gttgaaaatt tggaaaatgt ctcaacaccg tcaccagcgc cactcgagag
121 tcatttctag ttcaccagtt gacactacat cggtgggatt ttgcccaaca ttcaagaaat
181 ttaagaggaa cgatgatgaa tgtcgggcat ttgtgaagag agtcataatg agccgtttct
241 ttaagataat tatgattagc actgtcacat cgaatgcgtt ttttatggcc ttgtggacca
301 gttatgacat aaggtaccgc ttgttcagac ttcttgagtt ctcggagatc ttctttgtgt
361 ccatctgcac atctgagttg tccatgaagg tctatgtgga ccccatcaac tactggaaga
421 acggctacaa cctgctggat gtgatcatta tcatcgttat gtttttaccc tatgccctcc
481 gccagctcat gggcaaacag ttcacttacc tgtatatcgc tgatggcatg cagtccctgc
541 gcatcctcaa gcttatcggc tatagccagg gcatccggac gctgatcacc gccgtggggc
601 agacagtcta caccgtggcc tctgtgctcc tcctgctctt cctcctcatg tacatcttcg
661 ctatcttggg cttctgcctg tttggatctc cagacaatgg tgaccatgat aactggggga
721 acctggctgc ggcttttttc accctcttca gcttggccac ggttgatggc tggacagacc
781 tgcagaagca gttggacaat cgggaatttg ctttgagccg ggcattcacc atcatcttca
841 tcttgctcgc ctctttcatc ttcctcaaca tgttcgtggg tgtgatgatc atgcacacag
901 aggactccat cagaaagttt gagcgagagc tgatgttgga gcagcaggag atgctcatgg
961 gagagaagca ggtgattctg cagcggcagc aggaggagat cagcaggctg atgcacatac
1021 agaaaaatgc tgactgcaca agtttcagtg agctggtgga gaactttaag aagaccttga
1081 gccacactga cccaatggtc ttggatgatt ttggcactag cttacccttc atcgatatct
1141 acttttccac tctggactac caggacacaa ctgtccacaa gcttcaagag ctgtactatg
1201 agatcgtgca tgtgctgagc ctaatgctgg aagacttgcc ccaggagaag ccccagtcct
1261 tggaaaaggt ggatgagaag tagctgggca tggggcaccc atgtgccgag agccttgcag
1321 accatgacag gtccctatta aacacaggct ttctgagttg tcaaaaaaaa aaaaaaaaaa
1381 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1441 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//