LOCUS BC110378 1523 bp mRNA linear HUM 08-SEP-2006
DEFINITION Homo sapiens solute carrier family 38, member 6, mRNA (cDNA clone
MGC:102697 IMAGE:5737780), complete cds.
ACCESSION BC110378
VERSION BC110378.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1523)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1523)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-NOV-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 233 Row: m Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24429573.
FEATURES Location/Qualifiers
source 1..1523
/db_xref="H-InvDB:HIT000386524"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:102697 IMAGE:5737780"
/tissue_type="Duodenum, adenocarcinoma"
/clone_lib="NIH_MGC_88"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1523
/gene="SLC38A6"
/gene_synonym="NAT-1"
/db_xref="GeneID:145389"
/db_xref="HGNC:HGNC:19863"
CDS 26..1396
/gene="SLC38A6"
/gene_synonym="NAT-1"
/codon_start=1
/product="solute carrier family 38, member 6"
/protein_id="AAI10379.1"
/db_xref="GeneID:145389"
/db_xref="HGNC:HGNC:19863"
/translation="MEASWGSFNAERGWYVSVQQPEEAEAEELSPLLSNELHRQRSPG
VSFGLSVFNLMNAIMGSGILGLAYVMANTGVFGFSFLLLTVALLASYSVHLLLSMCIQ
TAVTSYEDLGLFAFGLPGKLVVAGTIIIQNIGAMSSYLLIIKTELPAAIAEFLTGDYS
RYWYLDGQTLLIIICVGIVFPLALLPKIGFLGYTSSLSFFFMMFFALVVIIKKWSIPC
PLTLNYVEKGFQISNVTDDCKPKLFHFSKESAYALPTMAFSFLCHTSILPIYCELQSP
SKKRMQNVTNTAIALSFLIYFISALFGYLTFYDKVESELLKGYSKYLSHDVVVMTVKL
CILFAVLLTVPLIHFPARKAVTMMFFSNFPFSWIRHFLITLALNIIIVLLAIYVPDIR
NVFGVVGASTSTCLIFIFPGLFYLKLSREDFLSWKKLGAFVLLIFGILVGNFSLALII
FDWINK"
BASE COUNT 423 a 281 c 286 g 533 t
ORIGIN
1 aactggtagt cagctggaga gcagcatgga ggcgtcctgg gggagcttca acgctgagcg
61 gggctggtat gtctctgtcc agcagcctga agaagcggag gccgaagagt tgagtccgtt
121 gctaagcaac gaacttcaca gacagcgatc cccaggtgtt tcatttggtt tatcagtgtt
181 taatttgatg aatgccatca tgggaagtgg catccttggc ttagcttatg ttatggctaa
241 taccggtgtc tttggattta gcttcttgct gctgacagtt gctctcctgg cttcttactc
301 agtccatctt ctgcttagta tgtgtattca gacagctgta acatcttatg aagatcttgg
361 actctttgca tttggattac ctggaaagtt ggtggtggca ggcaccataa taattcagaa
421 tattggagct atgtcatctt atcttttaat tattaaaaca gagcttcctg ctgctattgc
481 agaatttttg actggagact atagtagata ttggtatctt gatggacaaa cactactaat
541 aatcatatgt gttggcattg tgttccctct tgcacttctt cccaaaatag gctttcttgg
601 ctacacaagt agtttatcat ttttctttat gatgttcttt gctcttgtgg taataattaa
661 aaaatggtcc atcccttgtc ctctgacatt aaattatgta gagaaaggct tccagatttc
721 aaatgttaca gatgattgta agccaaagct ctttcatttc tccaaagaga gtgcttatgc
781 cttaccaacc atggcttttt catttctctg ccatacctca atattgccca tatactgtga
841 acttcaaagt ccttcaaaga aaagaatgca gaatgttacc aatacagcaa ttgctttaag
901 ttttctcatt tattttatat ctgcactctt tgggtacctc actttttatg acaaagtgga
961 gtcagaatta ctaaaaggtt atagtaaata cttatcacat gatgttgttg tcatgactgt
1021 gaagttatgc atactatttg ctgtgctttt gacagtccct ctaatccact tccctgccag
1081 aaaagctgta acaatgatgt ttttctccaa ttttccattc tcatggattc gccatttttt
1141 gatcactcta gcactcaata ttatcatcgt tttacttgca atatatgttc ctgacattag
1201 aaatgtattt ggtgtagttg gtgccagtac atcaacatgt ttgattttta tattcccagg
1261 actattttat cttaaactta gcagagagga ttttctgtca tggaaaaagc ttggggcatt
1321 cgttttgctc atctttggaa ttttggttgg gaattttagt ttagcactca tcatttttga
1381 ttggattaat aaataaaaga aatattttcc tacttcttac aagaataata tacccctagt
1441 tgcaagaatg aattattccg gaagacaccc tggatgaaaa ataacatttt aataaaaatt
1501 attaacagaa aaaaaaaaaa aaa
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