LOCUS BC110345 2535 bp mRNA linear HUM 02-DEC-2006
DEFINITION Homo sapiens family with sequence similarity 129, member B, mRNA
(cDNA clone IMAGE:5140923), partial cds.
ACCESSION BC110345
VERSION BC110345.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2535)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2535)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (18-NOV-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 233 Row: a Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 51093862.
FEATURES Location/Qualifiers
source 1..2535
/db_xref="H-InvDB:HIT000339512"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5140923"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2535
/gene="FAM129B"
/gene_synonym="bA356B19.6"
/gene_synonym="C9orf88"
/gene_synonym="DKFZP434H0820"
/gene_synonym="FLJ13518"
/gene_synonym="FLJ22151"
/gene_synonym="FLJ22298"
/gene_synonym="MEG-3"
/gene_synonym="OC58"
/gene_synonym="RP11-356B19.6"
/db_xref="GeneID:64855"
/db_xref="HGNC:HGNC:25282"
CDS <1..984
/gene="FAM129B"
/gene_synonym="bA356B19.6"
/gene_synonym="C9orf88"
/gene_synonym="DKFZP434H0820"
/gene_synonym="FLJ13518"
/gene_synonym="FLJ22151"
/gene_synonym="FLJ22298"
/gene_synonym="MEG-3"
/gene_synonym="OC58"
/gene_synonym="RP11-356B19.6"
/codon_start=1
/product="FAM129B protein"
/protein_id="AAI10346.1"
/db_xref="GeneID:64855"
/db_xref="HGNC:HGNC:25282"
/translation="AKAAGWRDGARPGAEPERKPQPGGGSGGSGGSRAGRAPWRQRRP
PEQRGQQRVLERVLKKYDYDSSSVRKRFFREALLQISIPFLLKKLAPTCKSELPRFQE
LIFEDFARFILVENTYEEVVLQTVMKDILQAVKEAAVQRKHNLYRDSMVMHNSDPNLH
LLAEGAPIDWGEEYSNSGGGGSPSPSTPESATLSEKRRRAKQVVSVVQDEEVGLPFEA
SPESPPPASPDGVTEIRGLLAQGLRPESPPPAGPLLNGAPAGESPQPKAAPEASSPPA
SPLQHLLPGKAVDLGPPKPSDQETGEQVSSPSSHPALHTTTEDSAGVQTEF"
BASE COUNT 448 a 780 c 837 g 470 t
ORIGIN
1 gccaaggcgg ccggctggag ggacggggcc cgaccgggag cggagccgga gcggaagccg
61 cagccgggcg gcgggagcgg cgggagcggg ggaagcaggg cgggccgggc tccatggcgc
121 cagcggcgtc cgcctgagca gcgcgggcaa cagcgggtcc tggagcgggt gctgaagaaa
181 tacgactacg acagcagctc tgtgcggaag aggttcttcc gggaggcgct gctgcagatc
241 agcatcccgt tcctgctcaa gaagctggcc cctacctgca agtcggagct gccccggttc
301 caggagctga tcttcgagga ctttgccagg ttcatcctgg tggaaaacac gtacgaggag
361 gtggtgctgc agaccgtcat gaaggacatc ctgcaggctg tgaaggaggc cgcggtgcag
421 aggaagcaca acctctaccg ggacagcatg gtcatgcaca acagcgaccc caacctgcac
481 ctgctggccg agggcgcccc catcgactgg ggcgaggagt acagcaacag cggcgggggc
541 ggcagcccca gccccagcac cccggagtca gccaccctct cggaaaagcg acggcgcgcc
601 aagcaggtgg tctctgtggt ccaggatgag gaggtggggc tgccctttga ggctagccct
661 gagtcaccac cacctgcgtc cccggacggt gtcactgaga tccgaggcct gctggcccaa
721 ggtctgcggc ctgagagccc cccaccagcc ggccccctgc tcaacggggc ccccgctggg
781 gagagtcccc agcctaaggc cgcccccgag gcctcctcgc cgcctgcctc acccctccag
841 catctcctgc ctggaaaggc tgtggacctt gggcccccca agcccagcga ccaggagact
901 ggagagcagg tgtccagccc cagcagccac cccgccctcc acaccaccac cgaggacagt
961 gcaggggtgc agactgagtt ctaggccagt gggtccctga ctgctgcaca tggcacaggc
1021 cgttcccttc cggacccagg caggctcagc tctggggagg gcaccctggt ctgtgccttg
1081 tgggtggagg cggggcaggg ctgtgtggca ccgccaggga gcgggcccac ctgagtcact
1141 ttattgggtt cagtcaacac tttcttgctc cctgttttct cttctgtggg atgatctcag
1201 atgcaggggc tggttttggg gttttcctgc ttgtgccaag ggctggacac tgctgggggg
1261 ctggaaagcc cctcccttcc tgtccttctg tggcctccat cccctcatgg gtgctgccat
1321 ccttcctgga gagagggagg tgaaagctgg tgtgagccca gtgggttccc gcccactcac
1381 ccaggagctg gctgggccag gaccgggaga gggagcactg ctgccctcct ggccctgctc
1441 cttccgcagt taggggtgga ccgagcctcg ctttccccac tgttctggag ggaaggggaa
1501 ggagggggtc ttcaggctgg agccaggctg ggggtgctgg gtggagagat gagatttagg
1561 gggtgcctca tggggtgggc aggcctgggg tgaaatgaga aaggcccaga acgtgcaggt
1621 ctgcggaggg gaagtgtcct gagtgaagga ggggaccccc atcctggggg atgctgggag
1681 tgagtgagtg agatggctga gtgagggtta tggggagcct gaggttttat gggcctgtgt
1741 atccccttct cccggcccca gcctgcctcc ctcctgcccg cctggcccac aggtctccct
1801 ctggtccctg tccctctggt ggttggggat ggagcggcag caaggggtgt aatggggctg
1861 ggttctgtct tctacaggcc accccgaggt cctcagtggt tgcctgggga gccggacggg
1921 gctcctgagg ggtacaggtt gggtgggccc tccctgaggg tctggggtca ggctttggcc
1981 tctgctgcct ctcagtcacc aagtcacctc cctctgaaaa tccagtccct tctttggatg
2041 tccttgtgag tcactctggg cctggctgtc gtccctcctc agcttcttgt tcctgggaca
2101 agggtcaagc caggatgggc ccaggcctgg gatcccccac cccaggaccc ccaggccccc
2161 tcccctgctg ctttgcgggg ggcagggcag aaatggactc cttttgggtc cccgaggtgg
2221 ggtcccctcc cagccctgca tcctccgtgc cctagacctg ctccccagag gaggggcctt
2281 gacccacagg acgtgtggtg gcgcctggca ctcagggacc cccagctgcc ccagccctgg
2341 tctctggcgc atctcttccc tcttgtcccg aagatctgcg cctctagtgc cttttgaggg
2401 gttcccatca tccctccctg atattgtatt gaaaatatta tgcacactgt tcatgcttct
2461 actaatcaat aaacgcttta tttaaagcca aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2521 aaaaaaaaaa aaaaa
//