LOCUS BC110339 1681 bp mRNA linear HUM 18-AUG-2006
DEFINITION Homo sapiens chromosome 10 open reading frame 18, mRNA (cDNA clone
IMAGE:5756954), partial cds.
ACCESSION BC110339
VERSION BC110339.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1681)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1681)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (18-NOV-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 233 Row: o Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..1681
/db_xref="H-InvDB:HIT000339506"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5756954"
/tissue_type="Blood, adult leukocytes"
/clone_lib="NIH_MGC_118"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1681
/gene="C10orf18"
/gene_synonym="bA318E3.2"
/gene_synonym="FLJ20360"
/db_xref="GeneID:54906"
/db_xref="HGNC:HGNC:23484"
CDS <1..943
/gene="C10orf18"
/gene_synonym="bA318E3.2"
/gene_synonym="FLJ20360"
/codon_start=2
/product="C10orf18 protein"
/protein_id="AAI10340.1"
/db_xref="GeneID:54906"
/db_xref="HGNC:HGNC:23484"
/translation="FNKVMKNSNQFIFQDKELNDVSGEATAQEMYLPFPGRSASYEDI
IIDVCTNLHVKLRSVVKEACKSTFLFYLVETEDKSFFVRTKNLLRKGGHTEIEPQHFC
QAFHRENDTLIIIIRNEDISSHLHQIPSLLKLKHFPSVIFAGVDSPGDVLDHTYQELF
RAGGFVISDDKILEAVTLVQLKEIIKILEKLNGNGRWKWLLHYRENKKLKEDERVDST
AHKKNIMLKSFQSANIIELLHYHQCDSRSSTKAEILKCLLNLQIQHIDARFAVLLTDK
PTIPREVFENNGILVTDVNNFIENIEKIAAPFRSSYW"
BASE COUNT 613 a 284 c 282 g 502 t
ORIGIN
1 attcaacaag gtgatgaaga atagcaacca attcattttc caagacaaag agctaaatga
61 tgtttctgga gaagccactg ctcaagagat gtatctgcct ttcccaggac ggtcagcctc
121 ctatgaagac ataatcatag acgtgtgcac caatttgcac gtcaaactaa gaagtgttgt
181 gaaagaggct tgtaaaagta ccttcctgtt ctaccttgtc gaaacagaag acaaatcatt
241 ctttgtaaga acaaagaacc ttctgaggaa aggaggccat acagaaattg aacctcagca
301 cttctgtcaa gctttccaca gagagaatga tacactaatc atcatcatca gaaatgaaga
361 tatatcatca catttgcatc agattccttc tttgctgaag ctgaagcatt tccccagtgt
421 catctttgct ggagtagaca gccctggaga tgttcttgat cacacctacc aagaactgtt
481 tcgtgcagga ggctttgtga tatcagatga caagatacta gaagctgtaa cattagttca
541 actgaaggaa attatcaaaa tcctggaaaa actaaatgga aatggaagat ggaagtggtt
601 gcttcactac agggaaaata aaaagctaaa agaagatgaa agagtggatt caactgcaca
661 taagaagaac ataatgttga agtcatttca gagtgcaaat atcattgaat tgcttcatta
721 tcaccagtgt gactctcgat catcaacaaa agcagaaatt ctgaaatgtt tgctaaacct
781 gcaaattcag catattgatg ccaggtttgc tgtcctccta acagacaagc ctactatccc
841 cagagaagtc tttgaaaata atggaatcct tgttacagat gtaaataact ttatagaaaa
901 catagaaaaa atagcagctc catttaggag tagctattgg tgactcaact acagcctgcc
961 tggatatgga tgatgccaat aaaaaattag tattttccct ttggaaaact tgtgaacatg
1021 tgaatacaca tgtgaacagt cttacatttg aaaaaccaat gttctacaac ttggaaagtt
1081 ttcatttttt atattttgct gaaatatgtc acagtggcat tgcagttgtc tgttagcttt
1141 gggttgcagt gctagatatt gttttaaatt attttcattt taaacaagat gccttctaag
1201 ctattgagct tattaaaaat aattttacat gtttacttag ttggagcaaa aataagtcta
1261 ttttaacaaa tagctttgtt tttgcatgct aatgtcagaa aggcatacga tgcacattat
1321 gctgttttaa aggttttacc acccttgtaa aaactataat cttaaatggt tttatttgct
1381 gttacacaaa caacactaca taaaacattt tttcctaaat ggtacaaatt tataaactat
1441 catttttcac ttacggtatt tgtaaatact acactacaaa aatcagcttt ctgagaaaga
1501 aataatcatt tatttatgat attgaaaatt tctacagtaa acactcaaaa ccaagcaaaa
1561 aacatttgta agatacacgg tatctatttg gagcaacggt ttttgtaact aatgtgtttc
1621 attttttaaa taaagacaac taaaaataaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1681 a
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