LOCUS BC110336 2581 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens transmembrane protein 200B, mRNA (cDNA clone
MGC:102864 IMAGE:5753003), complete cds.
ACCESSION BC110336
VERSION BC110336.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2581)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2581)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (18-NOV-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 233 Row: o Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 51242136.
FEATURES Location/Qualifiers
source 1..2581
/db_xref="H-InvDB:HIT000339503"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:102864 IMAGE:5753003"
/tissue_type="Brain, Lung, Testis, adult, pooled whole"
/clone_lib="NIH_MGC_115"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2581
/gene="TMEM200B"
/gene_synonym="TTMB"
/db_xref="GeneID:399474"
/db_xref="HGNC:HGNC:33785"
CDS 159..1082
/gene="TMEM200B"
/gene_synonym="TTMB"
/codon_start=1
/product="TMEM200B protein"
/protein_id="AAI10337.1"
/db_xref="GeneID:399474"
/db_xref="HGNC:HGNC:33785"
/translation="MTAGSPEECGEVRRSPEGRVSRLGRRLGRRRRPRSPPEPLRVRA
RLRLRSPSGAFAALGALVVLVGMGIAVAGYWPHRAGAPGSRAANASSPQMSELRREGR
GGGRAHGPHERLRLLGPVIMGVGLFVFICANTLLYENRDLETRRLRQGVLRAQALRPP
DGPGWDCALLPSPGPRSPRAVGCAEPEIWDPSPRRGTSPVPSVRSLRSEPANPRLGLP
ALLNSYPLKGPGLPPPWGPRTQTGHVIITVQPSGSCIEHSKSLDLGLGELLLGAPAAR
DCAHRSWPRLDRLSLGGYAKLGGGGDLGARV"
BASE COUNT 535 a 728 c 785 g 533 t
ORIGIN
1 gtcttgatcc gagcggtctt cccggtgtct agctcaagtc gctcctgctg cagcttcgct
61 gcgggcggag gaggtctgga aggagggggc gggcagggag aggctggagc cggtgacgcc
121 ccctcctccc gcgctgcgag cgcccagacg acggcgagat gacggccggg agccccgaag
181 aatgcgggga ggtgcggagg agccccgagg gccgcgtctc tcgcttgggc cgccgcctgg
241 gccgccgccg gcgcccgcgc tccccgcccg agcctctgcg ggtgcgggcg cggctgcggc
301 tgcgctcgcc gtcgggggcg ttcgcggcgc tgggggcgct cgtggtactg gtgggtatgg
361 gcattgcagt ggccggctac tggccgcacc gggccggggc cccagggtcc cgggccgcca
421 atgccagctc gccccagatg agcgagctgc gacgcgaggg tcgcggcggg ggccgggctc
481 acggcccgca cgagcggctg cggctcctcg ggccggtgat catgggcgtc ggcctgttcg
541 tgttcatctg cgccaacaca ctgctgtatg agaaccgaga cttggagacg cgacggctcc
601 gccagggggt gctgcgggcc caggcgctcc ggccccccga cggcccgggc tgggactgcg
661 ccctccttcc cagccccggc cctaggagtc cccgagccgt aggctgcgca gagccagaaa
721 tctgggaccc gtccccgcgt cggggtactt cacccgtccc gtcagtgcgg agtctgcgtt
781 cagagcccgc taatcctcgc ttggggttac ctgccttgct caacagctac ccgctgaagg
841 gccccgggct gcccccaccc tggggtccac ggacgcagac tggccatgtg atcatcaccg
901 tgcagccgtc tggctcctgc attgaacatt ccaagtctct ggatctgggc cttggggagc
961 tcctccttgg ggccccagca gctcgggact gtgctcaccg aagctggcca cggctggacc
1021 gcctcagtct tgggggctat gccaaattgg gaggaggagg ggacttgggg gcccgggtct
1081 gaagagaggg gagacagcct gctctgaggc tgcagcatgg accatgctaa taggaccaaa
1141 ggaccaggag tcccaacgtc taatagatgt ttcagtcaca tcccaggctg gggatggatg
1201 ctctgaccac agcagctgtg aagggcatcc tgacctgcat gcgggcagag aaatgccagc
1261 tgcaccaggg ctcagtgagc tggagagggt gcgtttcact gtggggtgtg gaggactcgc
1321 ctcaggaatt tcttcagcct ctgtaagtgg ccttagccct aacagggctg gaggtccagg
1381 ccagggtgac tgggagatgt acccagtgtc ttggcaaacc caagaaagtg gtgggcaagg
1441 gcccctaaga ctgggaggta ggttgggatg ttacaggctg gggcaggctc cctccaaggc
1501 ggcactggtg atggagtgtg gggcctctgg gaagatggac cacgggatga gactctccac
1561 tgccatctgg gacggggact gagccttgaa ctcctaccac ctcaatccct ttcttccctc
1621 agccatctgg ggtatatccc tctagagcta cactactgcc aatgccttca tactgagttc
1681 tgggcccttc tgcaaataag tctgagaagc cccttctctc cttcctttat cgtggcctat
1741 gctgcagaat ctcactgcag ctggcaaaag gcattggcca gctctcagaa atccctttac
1801 tcaacgttga agctgcattt tggtcaatgt gggtaactta ctttagaaaa tgacttgagt
1861 ttaggtctcc cccacccata tttaattttt cccaagttgc tggtagaaga gaaatttaaa
1921 agtggatcaa tcctcacaga gagagttctt tttgttgttg tttattgaaa aaaatgcaat
1981 acaagaagca agaccaaaca gatatctaaa cactacaacc acttctacta cgaaaggcca
2041 aaacagcaga cttgattatt gcctgtgtag tctaaagatt ctgccaatct gattctgctg
2101 cccgagttcc tattttttca agaaatgtaa acaactactt gatatgattc ataattttaa
2161 aaaaaattta caaagctcct tcatttttgt caccaaaata atacatttga gagagatttg
2221 tagaaacaac cagcctgggg ctgagatcct gggcagaaat ttcccgtgag catcaaaagg
2281 cgtcagtcag gccgcagctc tggctccagt tcccgaggtt tgttgtctcc tcacccccag
2341 ctgccaagca tccccccaac acacactgat gggcccagcg gtggaggggg gggtggggac
2401 ggggatgggt cacggggccc tgacgggtcc cgcagttagg ctccctgagc cctcggctta
2461 taaatacagg tcttgctttg tgggtgggtg ccagagtcct catgtggctt ggaggaaatc
2521 tttatttctc aaattaaaat aaaattgcag cgaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2581 a
//