LOCUS BC110299 2132 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens peptidylprolyl isomerase F, mRNA (cDNA clone
MGC:117207 IMAGE:5215228), complete cds.
ACCESSION BC110299
VERSION BC110299.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2132)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2132)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (18-NOV-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 233 Row: e Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 45439321.
FEATURES Location/Qualifiers
source 1..2132
/db_xref="H-InvDB:HIT000339474"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:117207 IMAGE:5215228"
/tissue_type="Blood, adult leukocytes"
/clone_lib="NIH_MGC_118"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2132
/gene="PPIF"
/gene_synonym="Cyp-D"
/gene_synonym="CYP3"
/db_xref="GeneID:10105"
/db_xref="HGNC:HGNC:9259"
/db_xref="MIM:604486"
CDS 63..530
/gene="PPIF"
/gene_synonym="Cyp-D"
/gene_synonym="CYP3"
/codon_start=1
/product="PPIF protein"
/protein_id="AAI10300.1"
/db_xref="GeneID:10105"
/db_xref="HGNC:HGNC:9259"
/db_xref="MIM:604486"
/translation="MLALRCGSRWLGLLSVPRSVPLRLPAARACSKGSGDPSSSSSSG
NPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSF
MCQAGDFTNHNGTGGKSIYGSRFPDENFTLKHVGPGWMASMLCSVTSKRAWTS"
BASE COUNT 470 a 566 c 548 g 548 t
ORIGIN
1 gcgcgacgtc agtttgagtt ctgtgttctc cccgcccgtg tcccgcccga cccgcgcccg
61 cgatgctggc gctgcgctgc ggctcccgct ggctcggcct gctctccgtc ccgcgctccg
121 tgccgctgcg cctccccgcg gcccgcgcct gcagcaaggg ctccggcgac ccgtcctctt
181 cctcctcctc cgggaacccg ctcgtgtacc tggacgtgga cgccaacggg aagccgctcg
241 gccgcgtggt gctggagctg aaggcagatg tcgtcccaaa gacagctgag aacttcagag
301 ccctgtgcac tggtgagaag ggcttcggct acaaaggctc caccttccac agagtgatcc
361 cttccttcat gtgccaggcg ggcgacttca ccaaccacaa tggcacaggc gggaagtcca
421 tctacggaag ccgctttcct gacgagaact ttacactgaa gcacgtgggg ccaggttgga
481 tggcaagcat gttgtgttcg gtcacgtcaa agagggcatg gacgtcgtga agaaaataga
541 atctttcggc tctaagagtg ggaggacatc caagaagatt gtcatcacag actgtggcca
601 gttgagctaa tctgtggcca gggtgctggc atggtggcag ctgcaaatgt ccatgcaccc
661 aggtggccgc gttgggctgt cagccaaggt gcctgaaacg atacgtgtgc ccactccact
721 gtcacagtgt gcctgaggaa ggctgctagg gatgttagac ctcggccagg acccaccaca
781 ttgcttccta atacccaccc ttcctcacga cctcatttct gggcatcttt gtggacatga
841 tgtcacccac cccttgtcaa gcattgcctg tgattgccca gcccagattc atctgtgcct
901 tggacatggt gatggtgatg ggttgccatc caagtgaaag tcttttcctt gaccaagggg
961 gacagtcagt tttgcaaaag gactctaata cctgtttaat attgtcttcc taattgggat
1021 aatttaatta acaagattga ctagaagtga aactgcaaca ctaacttccc catgctgtgg
1081 tgtgacctga gttggtgaca caggccacag accccagagc ttggcttttg aaacacaact
1141 cagggctttt gtgaaggttc ccccgctgag atctttcctc ctggttactg tgaagcctgt
1201 tggtttgctg ctgtcgtttt tgaggagggc ccatgggggt aggagcagtt gaacctggga
1261 acaaacctca cttgagctgt gcctagacaa tgtgaattcc tgtgttgcta acagaagtgg
1321 cctgtaagct cctgtgctcc ggagggaagc atttcctggt aggctttgat ttttctgtgt
1381 gttaaagaaa ttcaatctac tcatgatgtg ttatgcataa aacatttctg gaacatggat
1441 ttgtgttcac cttaaatgtg aaaataaatc ctattttcta tggaagactg gtacctggtt
1501 tctggaagag gggtctgtga cttggagctg atctttactg agctcgccgt ggcagatgcc
1561 atgctcagga cgttcatgtg gatggtttca tgtcatcgtg ctggcaactt gtcctccctg
1621 ccttagagat gaggctcaga caaacgacct tagcacccat agcctatgcc atgagcactg
1681 gctccaccct gaatcccagc tcctcccctt agtgacccca agtctgtttc cctcagctgc
1741 ataaggaggc gatatagttt gaatatttgt ccccagccaa atctcatgtt gaactgtaat
1801 ccccagtgct ggaggtgggg cctggtacga ggtgtttgga tcatggggac gggtatttca
1861 tggcttggtg ctgttttctt gatggtgaat tattgcaaga tacggtcatt taaaattgtg
1921 tggcacctcc ccctgccccc ttcttgctcc tgctttcacc atgtgacatg tctgatcccc
1981 cttcaccttt tgccatggtc ataagcttcc tgaggcctcc ctggaagctg agcagatgcc
2041 agcaccatgc ttcctgtaca tcctgcagaa ccataagcca attaaacctt tttaataata
2101 aattaaaaaa aaaaaaaaaa aaaaaaaaaa aa
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