LOCUS BC110291 1117 bp mRNA linear HUM 12-OCT-2006
DEFINITION Homo sapiens programmed cell death 6, mRNA (cDNA clone MGC:111017
IMAGE:5187550), complete cds.
ACCESSION BC110291
VERSION BC110291.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1117)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1117)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (18-NOV-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 233 Row: c Column: 11.
FEATURES Location/Qualifiers
source 1..1117
/db_xref="H-InvDB:HIT000339466"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:111017 IMAGE:5187550"
/tissue_type="Colon, Kidney, Stomach, adult, whole pooled"
/clone_lib="NIH_MGC_116"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1117
/gene="PDCD6"
/gene_synonym="ALG-2"
/gene_synonym="MGC9123"
/gene_synonym="PEF1B"
/db_xref="GeneID:10016"
/db_xref="HGNC:HGNC:8765"
/db_xref="MIM:601057"
CDS 65..634
/gene="PDCD6"
/gene_synonym="ALG-2"
/gene_synonym="MGC9123"
/gene_synonym="PEF1B"
/codon_start=1
/product="programmed cell death 6"
/protein_id="AAI10292.1"
/db_xref="GeneID:10016"
/db_xref="HGNC:HGNC:8765"
/db_xref="MIM:601057"
/translation="MAAYSYRPGPGAGPGPAAGAALPDQSFLWNVFQRVDKDRSGVIS
DTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYITDWQNVFRTY
DRDNSGMIDKNELKQALSGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLT
DIFRRYDTDQDGWIQVSYEQYLSMVFSIV"
BASE COUNT 291 a 257 c 290 g 279 t
ORIGIN
1 cggagtcggc ctgagaggtc tctcgtcgct gcaggcgcct cagcccagcc gcgtgccttg
61 gcccatggcc gcctactctt accgccccgg ccctggggcc ggccctgggc ctgctgcagg
121 cgcggcgctg ccggaccaga gcttcctgtg gaacgttttc cagagggtcg ataaagacag
181 gagtggagtg atatcagaca ccgagcttca gcaagctctc tccaacggca cgtggactcc
241 ctttaatcca gtgactgtca ggtcgatcat atccatgttt gaccgtgaga acaaggccgg
301 cgtgaacttc agcgagttca cgggtgtgtg gaagtacatc acggactggc agaacgtctt
361 ccgcacgtac gaccgggaca actccgggat gatcgataag aacgagctga agcaggccct
421 ctcaggctac cggctctctg accagttcca cgacatcctc attcgaaagt ttgacaggca
481 gggacggggg cagattgcct tcgacgactt catccagggc tgcatcgtcc tgcagaggtt
541 gacggatata ttcagacgtt acgacacgga tcaggacggc tggattcagg tgtcgtacga
601 acagtacctg tccatggtct tcagtatcgt atgaccctgg cctctcgtga agagcagcac
661 aacatggaaa gagccaaaat gtcacagttc ctatctgtga gggaatggag cacaggtgca
721 gttagatgct gttcttcctt tagattttgt cacgtgggga cccagctgta catatgtgga
781 taagctgatt aatggttttg caactgtaat agtagctgta tcgttctaat gcagacattg
841 gatttggtga ctgtctcatt gtgccatgag gtaaatgtaa tgtttcaggc attctgcttg
901 caaaaaaatc tatcatgtgc ttttctagat gtctctggtt ctatagtgca aatgctttta
961 ttagccaata ggaattttaa aataacatgg aacttacaca aaaggctttt catgtgcctt
1021 acttttttaa aaaggagttt attgtattca ttggaatatg tgacgtaagc aataaaggga
1081 atgttagaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
//