LOCUS BC110080 944 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens cripto, FRL-1, cryptic family 1, mRNA (cDNA clone
MGC:133213 IMAGE:40030641), complete cds.
ACCESSION BC110080
VERSION BC110080.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 944)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 944)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-NOV-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 17 Row: i Column: 20.
FEATURES Location/Qualifiers
source 1..944
/db_xref="H-InvDB:HIT000339456"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:133213 IMAGE:40030641"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: AAATGATG"
gene 1..944
/gene="CFC1"
/gene_synonym="CRYPTIC"
/gene_synonym="HTX2"
/db_xref="GeneID:55997"
/db_xref="HGNC:HGNC:18292"
/db_xref="MIM:605194"
CDS 162..833
/gene="CFC1"
/gene_synonym="CRYPTIC"
/gene_synonym="HTX2"
/codon_start=1
/product="cripto, FRL-1, cryptic family 1"
/protein_id="AAI10081.1"
/db_xref="GeneID:55997"
/db_xref="HGNC:HGNC:18292"
/db_xref="MIM:605194"
/translation="MTWRHHVRLLFTVSLALQIINLGNSYQREKHNGGREEVTKVATQ
KHRQSPLNWTSSHFGEVTGSAEGWGPEEPLPYSRAFGEGASARPRCCRNGGTCVLGSF
CVCPAHFTGRYCEHDQRRSECGALEHGAWTLRACHLCRCIFGALHCLPLQTPDRCDPK
DFLASHAHGPSAGGAPSLLLLLPCALLHRLLRPDAPAHPRSLVPSVLQRERRPCGRPG
LGHRL"
BASE COUNT 190 a 290 c 269 g 195 t
ORIGIN
1 ggctgaggaa gggaagggaa catccacatc ttctgtactc gtccattctg tgtccccggg
61 gcctggagta aagacacctt caaatgcaga gactcttcag attcagcttt cctggaaact
121 gatcttcaat gcactaagag aaggagactc tcaaaccaaa aatgacctgg aggcaccatg
181 tcaggcttct gtttacggtc agtttggcat tacagatcat caatttggga aacagctatc
241 aaagagagaa acataacggc ggtagagagg aagtcaccaa ggttgccact cagaagcacc
301 gacagtcacc gctcaactgg acctccagtc atttcggaga ggtgactggg agcgccgagg
361 gctgggggcc ggaggagccg ctcccctact cccgggcttt cggagagggt gcgtccgcgc
421 ggccgcgctg ctgcaggaac ggcggtacct gcgtgctggg cagcttctgc gtgtgcccgg
481 cccacttcac cggccgctac tgcgagcatg accagaggcg cagtgaatgc ggcgccctgg
541 agcacggagc ctggaccctc cgcgcctgcc acctctgcag gtgcatcttc ggggccctgc
601 actgcctccc cctccagacg cctgaccgct gtgacccgaa agacttcctg gcctcccacg
661 ctcacgggcc gagcgccggg ggcgcgccca gcctgctact cttgctgccc tgcgcactcc
721 tgcaccgcct cctgcgcccg gatgcgcccg cgcaccctcg gtccctggtc ccttccgtcc
781 tccagcggga gcggcgcccc tgcggaaggc cgggacttgg gcatcgcctt taattttcta
841 tgttgtaaat aatagatgtg tttagtttac cgtaagctga agcactgggt gaatattttt
901 attgggtaat aaatattttc atgaaagcgc ctttggctcc agat
//