LOCUS BC109321 1083 bp mRNA linear HUM 04-OCT-2006
DEFINITION Homo sapiens sarcoglycan, gamma (35kDa dystrophin-associated
glycoprotein), mRNA (cDNA clone MGC:130048 IMAGE:40036813),
complete cds.
ACCESSION BC109321
VERSION BC109321.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1083)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1083)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 26, 2006 this sequence version replaced BC109321.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 14 Row: p Column: 17.
FEATURES Location/Qualifiers
source 1..1083
/db_xref="H-InvDB:HIT000339416"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:130048 IMAGE:40036813"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: AAAT sequenced from the
reverse primer"
gene 1..1083
/gene="SGCG"
/gene_synonym="A4"
/gene_synonym="DAGA4"
/gene_synonym="DMDA"
/gene_synonym="SCARMD2"
/gene_synonym="SCG3"
/gene_synonym="TYPE"
/db_xref="GeneID:6445"
/db_xref="HGNC:HGNC:10809"
/db_xref="MIM:608896"
CDS 116..991
/gene="SGCG"
/gene_synonym="A4"
/gene_synonym="DAGA4"
/gene_synonym="DMDA"
/gene_synonym="SCARMD2"
/gene_synonym="SCG3"
/gene_synonym="TYPE"
/codon_start=1
/product="sarcoglycan, gamma (35kDa dystrophin-associated
glycoprotein)"
/protein_id="AAI09322.1"
/db_xref="GeneID:6445"
/db_xref="HGNC:HGNC:10809"
/db_xref="MIM:608896"
/translation="MVREQYTTATEGICIERPENQYVYKIGIYGWRKRCLYLFVLLLL
IILVVNLALTIWILKVMWFSPAGMGHLCVTKDGLRLEGESEFLFPLYAKEIHSRVDSS
LLLQSTQNVTVNARNSEGEVTGRLKVGPKMVEVQNQQFQINSNDGKPLFTVDEKEVVV
GTDKLRVTGPEGALFEHSVETPLVRADPFQDLRLESPTRSLSMDAPRGVHIQAHAGKI
EALSQMDILFHSSDGMLVLDAETVCLPKLVQGTWGPSGSSQSLYEICVCPDGKLYLSV
AGVSTTCQEHSHICL"
BASE COUNT 272 a 247 c 277 g 287 t
ORIGIN
1 gcttcatcct ttgctctcat tctgtaagtc atagaaaagt ttgaaacatt ctgtctgtgg
61 tagagctcgg gccagctgta gttcattcgc cagtgtgctt ttcttaatat ctaagatggt
121 gcgtgagcag tacactacag ccacagaagg catctgcata gagaggccag agaatcagta
181 tgtctacaaa attggcattt atggctggag aaagcgctgt ctctacttgt ttgttcttct
241 tttactcatc atcctcgttg tgaatttagc tcttacaatt tggattctta aagtgatgtg
301 gttttctcca gcaggaatgg gccacttgtg tgtaacaaaa gatggactgc gcttggaagg
361 ggaatcagaa tttttattcc cattgtatgc caaagaaata cactccagag tggactcatc
421 tctgcttcta caatcaaccc agaatgtgac tgtaaatgcg cgcaactcag aaggggaggt
481 cacaggcagg ttaaaagtcg gtcccaaaat ggtagaagtc cagaatcaac agtttcagat
541 caactccaac gacggcaagc cactatttac tgtagatgag aaggaagttg tggttggtac
601 agataaactt cgagtaactg ggcctgaagg ggctcttttt gaacattcag tggagacacc
661 ccttgtcaga gccgacccgt ttcaagacct tagattagaa tcccccactc ggagtctaag
721 catggatgcc ccaaggggtg tgcatattca agctcacgct gggaaaattg aggcgctttc
781 tcaaatggat attctttttc atagtagtga tggaatgctt gtgcttgatg ctgaaactgt
841 gtgcttaccc aagctggtgc aggggacgtg gggtccctct ggcagctcac agagcctcta
901 cgaaatctgt gtgtgtccag atgggaagct gtacctgtct gtggccggtg tgagcaccac
961 gtgccaggag cacagccaca tctgcctctg agctgcctgc gtcctctcgg tgagctgtgc
1021 agtgccggcc ccagatcctc acacccaggg agcagctgca catcgtgaaa gactgaggca
1081 gcg
//